PDB Chemical Component ZCL
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for ZCL
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.493 |
1.469 |
| N |
H |
1.000 |
1.009 |
| N |
H2 |
1.000 |
1.009 |
| O |
C |
1.277 |
1.209 |
| CLZ |
CZ |
1.735 |
1.736 |
| CZ |
CE2 |
1.431 |
1.383 |
| CE2 |
CD2 |
1.420 |
1.382 |
| CE2 |
HE2 |
1.081 |
1.080 |
| CLE1 |
CE1 |
1.664 |
1.735 |
| CE1 |
CD1 |
1.355 |
1.383 |
| CE1 |
CZ |
1.415 |
1.385 |
| CG |
CD2 |
1.426 |
1.382 |
| CD2 |
HD2 |
1.080 |
1.080 |
| CD1 |
CG |
1.406 |
1.383 |
| CD1 |
HD1 |
1.080 |
1.080 |
| CG |
CB |
1.515 |
1.507 |
| CB |
CA |
1.594 |
1.530 |
| CB |
HB3 |
1.100 |
1.090 |
| CB |
HB2 |
1.100 |
1.090 |
| CA |
C |
1.602 |
1.507 |
| CA |
HA |
1.100 |
1.090 |
| C |
OXT |
|
1.343 |
| OXT |
HXT |
|
0.967 |
Bond Angles for ZCL
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
H |
109.5 |
111.0 |
| CA |
N |
H2 |
109.5 |
111.0 |
| N |
CA |
CB |
118.8 |
109.5 |
| N |
CA |
C |
105.5 |
109.5 |
| N |
CA |
HA |
109.5 |
109.5 |
| H |
N |
H2 |
109.4 |
111.0 |
| O |
C |
OXT |
|
120.0 |
| CLZ |
CZ |
CE2 |
124.6 |
120.0 |
| CLZ |
CZ |
CE1 |
116.4 |
120.0 |
| CZ |
CE2 |
HE2 |
121.7 |
120.0 |
| CD2 |
CE2 |
HE2 |
121.6 |
120.0 |
| CE2 |
CD2 |
HD2 |
118.8 |
120.1 |
| CLE1 |
CE1 |
CD1 |
115.5 |
120.0 |
| CLE1 |
CE1 |
CZ |
120.7 |
120.0 |
| CD1 |
CE1 |
CZ |
123.8 |
119.9 |
| CE1 |
CD1 |
CG |
119.2 |
120.0 |
| CE1 |
CD1 |
HD1 |
120.4 |
120.0 |
| CG |
CD2 |
HD2 |
118.8 |
119.9 |
| CG |
CD1 |
HD1 |
120.4 |
120.0 |
| CD1 |
CG |
CB |
116.0 |
120.0 |
| CG |
CB |
CA |
104.9 |
109.4 |
| CG |
CB |
HB3 |
111.0 |
109.5 |
| CG |
CB |
HB2 |
111.1 |
109.5 |
| CA |
CB |
HB3 |
111.1 |
109.4 |
| CA |
CB |
HB2 |
111.0 |
109.5 |
| CB |
CA |
C |
118.0 |
109.4 |
| CB |
CA |
HA |
93.7 |
109.5 |
| HB3 |
CB |
HB2 |
107.8 |
109.5 |
| CA |
C |
OXT |
|
120.0 |
| C |
OXT |
HXT |
|
117.0 |
Torsion Angles for ZCL
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H |
N |
CA |
H2 |
240.0 |
236.0 |
| CG |
CB |
CA |
N |
309.4 |
294.9 |
| N |
CA |
CB |
HB3 |
189.4 |
175.0 |
| N |
CA |
CB |
HB2 |
69.4 |
54.9 |
| CB |
CA |
N |
C |
224.8 |
240.1 |
| CB |
CA |
N |
HA |
105.9 |
120.1 |
| N |
CA |
C |
OXT |
|
160.0 |
| CA |
N |
H |
H2 |
120.0 |
124.0 |
| H |
N |
CA |
CB |
180.0 |
176.1 |
| H |
N |
CA |
C |
315.2 |
296.0 |
| H |
N |
CA |
HA |
74.1 |
56.0 |
| CA |
N |
H2 |
H |
240.0 |
236.0 |
| H2 |
N |
CA |
CB |
300.0 |
300.0 |
| H2 |
N |
CA |
C |
75.2 |
60.0 |
| H2 |
N |
CA |
HA |
194.1 |
180.0 |
| N |
CA |
C |
O |
276.7 |
340.0 |
| CB |
CA |
C |
O |
52.3 |
100.0 |
| CA |
C |
O |
OXT |
|
180.0 |
| O |
C |
OXT |
HXT |
|
360.0 |
| CLZ |
CZ |
CE2 |
HE2 |
1.9 |
0.3 |
| CLE1 |
CE1 |
CZ |
CLZ |
359.1 |
0.3 |
| CD1 |
CE1 |
CZ |
CLZ |
179.0 |
179.5 |
| CLZ |
CZ |
CE2 |
CE1 |
179.8 |
180.0 |
| CD2 |
CE2 |
CZ |
HE2 |
180.0 |
179.6 |
| CZ |
CE2 |
CD2 |
HD2 |
177.9 |
180.3 |
| CLZ |
CZ |
CE2 |
CD2 |
181.9 |
179.9 |
| CZ |
CE2 |
CD2 |
HE2 |
180.0 |
180.4 |
| CG |
CD2 |
CE2 |
HD2 |
180.0 |
180.1 |
| HE2 |
CE2 |
CD2 |
HD2 |
357.9 |
359.9 |
| CLZ |
CZ |
CE1 |
CLE1 |
359.1 |
0.3 |
| CD1 |
CE1 |
CLE1 |
CZ |
180.1 |
180.8 |
| CLE1 |
CE1 |
CD1 |
CG |
179.9 |
180.0 |
| CLE1 |
CE1 |
CD1 |
HD1 |
359.9 |
359.2 |
| CLZ |
CZ |
CE1 |
CD1 |
179.0 |
179.5 |
| CLE1 |
CE1 |
CD1 |
CZ |
179.9 |
179.2 |
| CG |
CD1 |
CE1 |
HD1 |
180.0 |
180.8 |
| CE1 |
CD1 |
CG |
CB |
181.3 |
180.0 |
| CLZ |
CZ |
CE1 |
CE2 |
180.1 |
180.0 |
| CE1 |
CZ |
CE2 |
HE2 |
182.1 |
180.3 |
| CLE1 |
CE1 |
CZ |
CD1 |
180.1 |
180.8 |
| CZ |
CE1 |
CD1 |
CG |
0.0 |
0.8 |
| CZ |
CE1 |
CD1 |
HD1 |
180.0 |
180.0 |
| CG |
CD2 |
CE2 |
HE2 |
177.9 |
180.0 |
| CE2 |
CD2 |
CG |
HD2 |
180.0 |
179.9 |
| CE1 |
CD1 |
CG |
CD2 |
0.0 |
359.5 |
| HD2 |
CD2 |
CE2 |
HE2 |
357.9 |
359.9 |
| CG |
CD1 |
CE1 |
CZ |
0.0 |
0.8 |
| CE1 |
CD1 |
CG |
HD1 |
180.0 |
179.2 |
| CD1 |
CG |
CD2 |
HD2 |
181.0 |
180.0 |
| CD1 |
CG |
CB |
CA |
94.8 |
90.1 |
| CD1 |
CG |
CB |
HB3 |
214.8 |
210.0 |
| CD1 |
CG |
CB |
HB2 |
334.8 |
330.0 |
| HD1 |
CD1 |
CE1 |
CZ |
180.0 |
180.0 |
| CE1 |
CD1 |
HD1 |
CG |
180.0 |
180.8 |
| HD1 |
CD1 |
CG |
CB |
1.2 |
0.8 |
| N |
CA |
CB |
CG |
309.4 |
294.9 |
| CB |
CG |
CD2 |
HD2 |
359.7 |
359.5 |
| CB |
CG |
CD1 |
HD1 |
1.2 |
0.8 |
| CA |
CB |
CG |
HB3 |
240.0 |
240.1 |
| CA |
CB |
CG |
HB2 |
120.0 |
120.0 |
| CG |
CB |
CA |
C |
179.7 |
175.0 |
| CG |
CB |
CA |
HA |
64.1 |
55.0 |
| HB3 |
CB |
CG |
HB2 |
240.0 |
240.0 |
| CB |
CA |
N |
H |
180.0 |
176.1 |
| CB |
CA |
N |
H2 |
300.0 |
300.0 |
| N |
CA |
CB |
C |
129.7 |
120.0 |
| N |
CA |
CB |
HA |
245.3 |
240.0 |
| CG |
CB |
CA |
HB3 |
120.0 |
119.9 |
| CG |
CB |
CA |
HB2 |
240.0 |
240.0 |
| HB3 |
CB |
CA |
HB2 |
120.0 |
120.1 |
| CB |
CA |
C |
OXT |
|
280.0 |
| CG |
CB |
HB3 |
CA |
243.7 |
240.1 |
| CG |
CB |
HB3 |
HB2 |
121.9 |
120.0 |
| CA |
CB |
HB3 |
HB2 |
238.1 |
239.9 |
| HB3 |
CB |
CA |
C |
59.7 |
55.1 |
| HB3 |
CB |
CA |
HA |
304.1 |
295.0 |
| CG |
CB |
HB2 |
CA |
116.3 |
120.0 |
| CG |
CB |
HB2 |
HB3 |
238.1 |
240.0 |
| CA |
CB |
HB2 |
HB3 |
121.9 |
120.0 |
| HB2 |
CB |
CA |
C |
299.7 |
295.0 |
| HB2 |
CB |
CA |
HA |
184.1 |
175.0 |
| C |
CA |
N |
H |
315.2 |
296.0 |
| C |
CA |
N |
H2 |
75.2 |
60.0 |
| N |
CA |
C |
CB |
224.4 |
240.0 |
| N |
CA |
C |
HA |
118.3 |
120.0 |
| O |
C |
CA |
OXT |
|
180.0 |
| C |
CA |
CB |
HB3 |
59.7 |
55.1 |
| C |
CA |
CB |
HB2 |
299.7 |
295.0 |
| CB |
CA |
C |
HA |
253.9 |
239.9 |
| CA |
C |
OXT |
HXT |
|
180.0 |
| HA |
CA |
N |
H |
74.1 |
56.0 |
| HA |
CA |
N |
H2 |
194.1 |
180.0 |
| N |
CA |
HA |
CB |
122.4 |
120.0 |
| N |
CA |
HA |
C |
244.2 |
240.0 |
| HA |
CA |
CB |
HB3 |
304.1 |
295.0 |
| HA |
CA |
CB |
HB2 |
184.1 |
175.0 |
| CB |
CA |
HA |
C |
121.8 |
120.0 |
| HA |
CA |
C |
OXT |
|
40.0 |