PDB Chemical Component ZAL
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for ZAL
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.535 |
1.530 |
C1 |
C6 |
1.533 |
1.530 |
C1 |
CB |
1.543 |
1.530 |
C1 |
H1 |
1.100 |
1.090 |
C2 |
C3 |
1.517 |
1.529 |
C2 |
H2B |
1.099 |
1.090 |
C2 |
H2A |
1.100 |
1.090 |
C3 |
C4 |
1.523 |
1.530 |
C3 |
H3 |
1.100 |
1.090 |
C3 |
H3A |
1.100 |
1.091 |
C4 |
C5 |
1.527 |
1.530 |
C4 |
H4 |
1.100 |
1.090 |
C4 |
H4A |
1.100 |
1.090 |
C5 |
C6 |
1.528 |
1.530 |
C5 |
H5 |
1.100 |
1.090 |
C5 |
H5A |
1.101 |
1.090 |
C6 |
H6 |
1.100 |
1.090 |
C6 |
H6A |
1.100 |
1.091 |
N |
CA |
1.503 |
1.468 |
N |
H |
1.000 |
1.009 |
N |
H2 |
1.000 |
1.009 |
CA |
CB |
1.543 |
1.531 |
CA |
C |
1.548 |
1.506 |
CA |
HA |
1.100 |
1.090 |
CB |
HB |
1.100 |
1.090 |
CB |
HBA |
1.100 |
1.090 |
C |
O |
1.228 |
1.208 |
C |
OXT |
1.430 |
1.343 |
OXT |
HXT |
0.950 |
0.967 |
Bond Angles for ZAL
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
108.8 |
109.4 |
C2 |
C1 |
CB |
109.4 |
109.5 |
C2 |
C1 |
H1 |
110.6 |
109.4 |
C1 |
C2 |
C3 |
111.7 |
109.5 |
C1 |
C2 |
H2B |
108.7 |
109.5 |
C1 |
C2 |
H2A |
108.3 |
109.4 |
C6 |
C1 |
CB |
111.5 |
109.5 |
C6 |
C1 |
H1 |
108.6 |
109.5 |
C1 |
C6 |
C5 |
110.3 |
109.5 |
C1 |
C6 |
H6 |
109.2 |
109.5 |
C1 |
C6 |
H6A |
109.0 |
109.4 |
CB |
C1 |
H1 |
107.9 |
109.5 |
C1 |
CB |
CA |
110.3 |
109.5 |
C1 |
CB |
HB |
109.2 |
109.4 |
C1 |
CB |
HBA |
109.0 |
109.5 |
C3 |
C2 |
H2B |
108.7 |
109.5 |
C3 |
C2 |
H2A |
108.2 |
109.5 |
C2 |
C3 |
C4 |
110.9 |
109.5 |
C2 |
C3 |
H3 |
109.0 |
109.5 |
C2 |
C3 |
H3A |
108.7 |
109.5 |
H2B |
C2 |
H2A |
111.2 |
109.4 |
C4 |
C3 |
H3 |
109.0 |
109.5 |
C4 |
C3 |
H3A |
108.6 |
109.4 |
C3 |
C4 |
C5 |
111.4 |
109.4 |
C3 |
C4 |
H4 |
108.8 |
109.5 |
C3 |
C4 |
H4A |
108.4 |
109.5 |
H3 |
C3 |
H3A |
110.6 |
109.4 |
C5 |
C4 |
H4 |
108.9 |
109.5 |
C5 |
C4 |
H4A |
108.4 |
109.5 |
C4 |
C5 |
C6 |
111.2 |
109.5 |
C4 |
C5 |
H5 |
108.9 |
109.5 |
C4 |
C5 |
H5A |
108.5 |
109.4 |
H4 |
C4 |
H4A |
111.0 |
109.5 |
C6 |
C5 |
H5 |
108.9 |
109.5 |
C6 |
C5 |
H5A |
108.5 |
109.5 |
C5 |
C6 |
H6 |
109.2 |
109.5 |
C5 |
C6 |
H6A |
109.0 |
109.5 |
H5 |
C5 |
H5A |
110.8 |
109.5 |
H6 |
C6 |
H6A |
110.1 |
109.5 |
CA |
N |
H |
109.5 |
111.0 |
CA |
N |
H2 |
109.5 |
111.0 |
N |
CA |
CB |
107.8 |
109.5 |
N |
CA |
C |
106.4 |
109.5 |
N |
CA |
HA |
113.0 |
109.5 |
H |
N |
H2 |
109.5 |
111.1 |
CB |
CA |
C |
110.9 |
109.4 |
CB |
CA |
HA |
108.7 |
109.4 |
CA |
CB |
HB |
109.2 |
109.4 |
CA |
CB |
HBA |
109.0 |
109.5 |
C |
CA |
HA |
110.0 |
109.5 |
CA |
C |
O |
119.9 |
120.0 |
CA |
C |
OXT |
120.0 |
120.0 |
HB |
CB |
HBA |
110.1 |
109.5 |
O |
C |
OXT |
120.0 |
120.0 |
C |
OXT |
HXT |
109.5 |
116.9 |
Torsion Angles for ZAL
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C1 |
C2 |
CB |
238.0 |
240.0 |
C6 |
C1 |
C2 |
H1 |
119.2 |
119.9 |
C2 |
C1 |
C6 |
C5 |
301.4 |
300.0 |
C2 |
C1 |
C6 |
H6 |
61.4 |
60.1 |
C2 |
C1 |
C6 |
H6A |
181.8 |
180.0 |
CB |
C1 |
C2 |
H1 |
241.2 |
240.0 |
C2 |
C1 |
CB |
CA |
172.2 |
65.7 |
C2 |
C1 |
CB |
HB |
292.3 |
185.6 |
C2 |
C1 |
CB |
HBA |
52.5 |
305.7 |
C3 |
C2 |
C1 |
H2B |
240.0 |
239.9 |
C3 |
C2 |
C1 |
H2A |
119.1 |
120.0 |
C1 |
C2 |
C3 |
C4 |
303.4 |
300.0 |
C1 |
C2 |
C3 |
H3 |
63.4 |
60.0 |
C1 |
C2 |
C3 |
H3A |
184.0 |
180.0 |
H2B |
C2 |
C1 |
H2A |
239.1 |
240.1 |
C2 |
C1 |
C6 |
CB |
120.8 |
120.0 |
C2 |
C1 |
C6 |
H1 |
239.5 |
240.1 |
C6 |
C1 |
C2 |
C3 |
58.6 |
59.9 |
C6 |
C1 |
C2 |
H2B |
178.6 |
180.0 |
C6 |
C1 |
C2 |
H2A |
299.5 |
299.9 |
CB |
C1 |
C6 |
H1 |
118.7 |
120.1 |
C6 |
C1 |
CB |
CA |
292.6 |
185.7 |
C6 |
C1 |
CB |
HB |
52.6 |
305.6 |
C6 |
C1 |
CB |
HBA |
172.9 |
65.7 |
C4 |
C5 |
C6 |
C1 |
57.6 |
60.1 |
C1 |
C6 |
C5 |
H5 |
297.6 |
300.1 |
C1 |
C6 |
C5 |
H5A |
176.9 |
180.0 |
C5 |
C6 |
C1 |
H6 |
240.0 |
239.9 |
C5 |
C6 |
C1 |
H6A |
119.6 |
120.0 |
H6 |
C6 |
C1 |
H6A |
239.7 |
240.1 |
C2 |
C1 |
CB |
C6 |
239.6 |
240.0 |
C2 |
C1 |
CB |
H1 |
120.5 |
120.0 |
CB |
C1 |
C2 |
C3 |
180.6 |
180.0 |
CB |
C1 |
C2 |
H2B |
300.6 |
300.0 |
CB |
C1 |
C2 |
H2A |
61.5 |
60.0 |
C6 |
C1 |
CB |
H1 |
240.9 |
240.0 |
CB |
C1 |
C6 |
C5 |
180.7 |
180.0 |
CB |
C1 |
C6 |
H6 |
300.7 |
300.1 |
CB |
C1 |
C6 |
H6A |
61.0 |
60.0 |
N |
CA |
CB |
C1 |
171.7 |
64.1 |
C1 |
CB |
CA |
C |
287.9 |
184.2 |
C1 |
CB |
CA |
HA |
48.9 |
304.1 |
CA |
CB |
C1 |
HB |
240.0 |
240.1 |
CA |
CB |
C1 |
HBA |
119.7 |
120.0 |
HB |
CB |
C1 |
HBA |
239.7 |
239.9 |
C2 |
C1 |
H1 |
C6 |
119.3 |
119.9 |
C2 |
C1 |
H1 |
CB |
240.3 |
240.0 |
H1 |
C1 |
C2 |
C3 |
299.4 |
300.0 |
H1 |
C1 |
C2 |
H2B |
59.4 |
60.1 |
H1 |
C1 |
C2 |
H2A |
180.3 |
180.0 |
C6 |
C1 |
H1 |
CB |
121.0 |
120.1 |
H1 |
C1 |
C6 |
C5 |
61.9 |
59.9 |
H1 |
C1 |
C6 |
H6 |
181.9 |
180.0 |
H1 |
C1 |
C6 |
H6A |
302.3 |
299.9 |
H1 |
C1 |
CB |
CA |
51.8 |
305.7 |
H1 |
C1 |
CB |
HB |
171.8 |
65.7 |
H1 |
C1 |
CB |
HBA |
292.1 |
185.7 |
C3 |
C2 |
C1 |
C6 |
58.6 |
59.9 |
C3 |
C2 |
C1 |
CB |
180.6 |
180.0 |
C3 |
C2 |
C1 |
H1 |
299.4 |
300.0 |
C1 |
C2 |
C3 |
H2B |
120.0 |
120.0 |
C1 |
C2 |
C3 |
H2A |
240.9 |
240.0 |
H2B |
C2 |
C3 |
H2A |
120.9 |
120.0 |
C4 |
C3 |
C2 |
H3 |
240.0 |
240.0 |
C4 |
C3 |
C2 |
H3A |
119.4 |
120.0 |
C2 |
C3 |
C4 |
C5 |
54.1 |
60.0 |
C2 |
C3 |
C4 |
H4 |
174.1 |
180.0 |
C2 |
C3 |
C4 |
H4A |
294.9 |
300.1 |
H3 |
C3 |
C2 |
H3A |
239.4 |
240.0 |
H2B |
C2 |
C1 |
C6 |
178.6 |
180.0 |
H2B |
C2 |
C1 |
CB |
300.6 |
300.0 |
H2B |
C2 |
C1 |
H1 |
59.4 |
60.1 |
C1 |
C2 |
H2B |
C3 |
238.2 |
240.0 |
C1 |
C2 |
H2B |
H2A |
119.1 |
119.9 |
C3 |
C2 |
H2B |
H2A |
240.9 |
240.0 |
H2B |
C2 |
C3 |
C4 |
183.4 |
180.0 |
H2B |
C2 |
C3 |
H3 |
303.4 |
300.0 |
H2B |
C2 |
C3 |
H3A |
64.0 |
60.0 |
H2A |
C2 |
C1 |
C6 |
299.5 |
299.9 |
H2A |
C2 |
C1 |
CB |
61.5 |
60.0 |
H2A |
C2 |
C1 |
H1 |
180.3 |
180.0 |
C1 |
C2 |
H2A |
C3 |
121.2 |
120.0 |
C1 |
C2 |
H2A |
H2B |
240.6 |
240.1 |
C3 |
C2 |
H2A |
H2B |
119.4 |
120.1 |
H2A |
C2 |
C3 |
C4 |
62.5 |
60.0 |
H2A |
C2 |
C3 |
H3 |
182.5 |
180.0 |
H2A |
C2 |
C3 |
H3A |
303.1 |
300.0 |
C4 |
C3 |
C2 |
H2B |
183.4 |
180.0 |
C4 |
C3 |
C2 |
H2A |
62.5 |
60.0 |
C2 |
C3 |
C4 |
H3 |
120.0 |
120.1 |
C2 |
C3 |
C4 |
H3A |
240.6 |
240.0 |
H3 |
C3 |
C4 |
H3A |
120.6 |
119.9 |
C5 |
C4 |
C3 |
H4 |
240.0 |
240.0 |
C5 |
C4 |
C3 |
H4A |
119.2 |
119.9 |
C3 |
C4 |
C5 |
C6 |
305.1 |
300.0 |
C3 |
C4 |
C5 |
H5 |
65.1 |
60.0 |
C3 |
C4 |
C5 |
H5A |
185.8 |
180.0 |
H4 |
C4 |
C3 |
H4A |
239.2 |
239.9 |
H3 |
C3 |
C2 |
H2B |
303.4 |
300.0 |
H3 |
C3 |
C2 |
H2A |
182.5 |
180.0 |
C2 |
C3 |
H3 |
C4 |
238.8 |
239.9 |
C2 |
C3 |
H3 |
H3A |
119.4 |
120.0 |
C4 |
C3 |
H3 |
H3A |
240.6 |
240.1 |
H3 |
C3 |
C4 |
C5 |
294.0 |
299.9 |
H3 |
C3 |
C4 |
H4 |
54.0 |
59.9 |
H3 |
C3 |
C4 |
H4A |
174.8 |
180.0 |
H3A |
C3 |
C2 |
H2B |
64.0 |
60.0 |
H3A |
C3 |
C2 |
H2A |
303.1 |
300.0 |
C2 |
C3 |
H3A |
C4 |
120.8 |
120.1 |
C2 |
C3 |
H3A |
H3 |
240.4 |
240.0 |
C4 |
C3 |
H3A |
H3 |
119.6 |
119.9 |
H3A |
C3 |
C4 |
C5 |
173.4 |
180.0 |
H3A |
C3 |
C4 |
H4 |
293.4 |
300.0 |
H3A |
C3 |
C4 |
H4A |
54.2 |
60.1 |
C1 |
C6 |
C5 |
C4 |
57.6 |
60.1 |
C5 |
C4 |
C3 |
H3 |
294.0 |
299.9 |
C5 |
C4 |
C3 |
H3A |
173.4 |
180.0 |
C3 |
C4 |
C5 |
H4 |
120.0 |
120.0 |
C3 |
C4 |
C5 |
H4A |
240.8 |
240.1 |
H4 |
C4 |
C5 |
H4A |
120.8 |
120.1 |
C6 |
C5 |
C4 |
H5 |
240.0 |
240.0 |
C6 |
C5 |
C4 |
H5A |
119.3 |
120.0 |
C4 |
C5 |
C6 |
H6 |
297.6 |
300.0 |
C4 |
C5 |
C6 |
H6A |
177.3 |
180.0 |
H5 |
C5 |
C4 |
H5A |
239.3 |
240.0 |
H4 |
C4 |
C3 |
H3 |
54.0 |
59.9 |
H4 |
C4 |
C3 |
H3A |
293.4 |
300.0 |
C3 |
C4 |
H4 |
C5 |
238.4 |
240.0 |
C3 |
C4 |
H4 |
H4A |
119.2 |
120.0 |
C5 |
C4 |
H4 |
H4A |
240.8 |
240.0 |
H4 |
C4 |
C5 |
C6 |
185.1 |
180.0 |
H4 |
C4 |
C5 |
H5 |
305.1 |
300.0 |
H4 |
C4 |
C5 |
H5A |
65.8 |
60.0 |
H4A |
C4 |
C3 |
H3 |
174.8 |
180.0 |
H4A |
C4 |
C3 |
H3A |
54.2 |
60.1 |
C3 |
C4 |
H4A |
C5 |
121.1 |
119.9 |
C3 |
C4 |
H4A |
H4 |
240.6 |
240.0 |
C5 |
C4 |
H4A |
H4 |
119.5 |
120.0 |
H4A |
C4 |
C5 |
C6 |
64.3 |
59.9 |
H4A |
C4 |
C5 |
H5 |
184.3 |
179.9 |
H4A |
C4 |
C5 |
H5A |
305.0 |
299.9 |
C5 |
C6 |
C1 |
CB |
180.7 |
180.0 |
C5 |
C6 |
C1 |
H1 |
61.9 |
59.9 |
C1 |
C6 |
C5 |
H6 |
120.0 |
120.0 |
C1 |
C6 |
C5 |
H6A |
240.3 |
240.1 |
C6 |
C5 |
C4 |
H4 |
185.1 |
180.0 |
C6 |
C5 |
C4 |
H4A |
64.3 |
59.9 |
C4 |
C5 |
C6 |
H5 |
120.0 |
120.0 |
C4 |
C5 |
C6 |
H5A |
240.7 |
240.0 |
H5 |
C5 |
C6 |
H5A |
120.7 |
120.0 |
H6 |
C6 |
C5 |
H6A |
120.3 |
120.0 |
H5 |
C5 |
C4 |
H4 |
305.1 |
300.0 |
H5 |
C5 |
C4 |
H4A |
184.3 |
179.9 |
C4 |
C5 |
H5 |
C6 |
238.6 |
240.0 |
C4 |
C5 |
H5 |
H5A |
119.3 |
120.0 |
C6 |
C5 |
H5 |
H5A |
240.7 |
240.0 |
H5 |
C5 |
C6 |
H6 |
177.6 |
180.0 |
H5 |
C5 |
C6 |
H6A |
57.3 |
60.0 |
H5A |
C5 |
C4 |
H4 |
65.8 |
60.0 |
H5A |
C5 |
C4 |
H4A |
305.0 |
299.9 |
C4 |
C5 |
H5A |
C6 |
121.0 |
120.0 |
C4 |
C5 |
H5A |
H5 |
240.5 |
240.0 |
C6 |
C5 |
H5A |
H5 |
119.5 |
120.0 |
H5A |
C5 |
C6 |
H6 |
56.9 |
60.0 |
H5A |
C5 |
C6 |
H6A |
296.5 |
300.0 |
H6 |
C6 |
C1 |
CB |
300.7 |
300.1 |
H6 |
C6 |
C1 |
H1 |
181.9 |
180.0 |
C1 |
C6 |
H6 |
C5 |
239.3 |
239.9 |
C1 |
C6 |
H6 |
H6A |
119.7 |
119.9 |
H6 |
C6 |
C5 |
H5 |
177.6 |
180.0 |
H6 |
C6 |
C5 |
H5A |
56.9 |
60.0 |
C5 |
C6 |
H6 |
H6A |
240.4 |
240.0 |
H6A |
C6 |
C1 |
CB |
61.0 |
60.0 |
H6A |
C6 |
C1 |
H1 |
302.3 |
299.9 |
C1 |
C6 |
H6A |
C5 |
120.5 |
120.0 |
C1 |
C6 |
H6A |
H6 |
240.2 |
240.1 |
H6A |
C6 |
C5 |
H5 |
57.3 |
60.0 |
H6A |
C6 |
C5 |
H5A |
296.5 |
300.0 |
C5 |
C6 |
H6A |
H6 |
119.7 |
120.1 |
C1 |
CB |
CA |
N |
171.7 |
64.1 |
H |
N |
CA |
H2 |
240.0 |
236.0 |
CB |
CA |
N |
C |
119.0 |
120.0 |
CB |
CA |
N |
HA |
239.9 |
240.1 |
N |
CA |
CB |
HB |
51.7 |
304.2 |
N |
CA |
CB |
HBA |
291.4 |
184.1 |
C |
CA |
N |
HA |
120.9 |
120.1 |
N |
CA |
C |
O |
42.0 |
20.0 |
N |
CA |
C |
OXT |
222.1 |
200.0 |
CA |
N |
H |
H2 |
120.0 |
123.9 |
H |
N |
CA |
CB |
2.9 |
60.0 |
H |
N |
CA |
C |
243.9 |
300.0 |
H |
N |
CA |
HA |
123.0 |
180.0 |
CA |
N |
H2 |
H |
240.0 |
236.1 |
H2 |
N |
CA |
CB |
122.9 |
184.0 |
H2 |
N |
CA |
C |
3.9 |
64.0 |
H2 |
N |
CA |
HA |
243.0 |
304.0 |
CA |
CB |
C1 |
H1 |
51.8 |
305.7 |
C1 |
CB |
CA |
HB |
120.0 |
120.0 |
C1 |
CB |
CA |
HBA |
240.3 |
240.0 |
CB |
CA |
N |
H |
2.9 |
60.0 |
CB |
CA |
N |
H2 |
122.9 |
184.0 |
N |
CA |
CB |
C |
243.9 |
239.9 |
N |
CA |
CB |
HA |
122.8 |
120.0 |
C |
CA |
CB |
HA |
238.9 |
240.0 |
CB |
CA |
C |
O |
285.1 |
259.9 |
CB |
CA |
C |
OXT |
105.1 |
80.0 |
HB |
CB |
CA |
HBA |
120.3 |
120.0 |
C |
CA |
N |
H |
243.9 |
300.0 |
C |
CA |
N |
H2 |
3.9 |
64.0 |
N |
CA |
C |
CB |
117.0 |
120.0 |
N |
CA |
C |
HA |
237.2 |
240.0 |
CB |
CA |
C |
HA |
120.3 |
119.9 |
C |
CA |
CB |
HB |
167.8 |
64.2 |
C |
CA |
CB |
HBA |
47.5 |
304.2 |
O |
C |
CA |
OXT |
180.0 |
179.9 |
CA |
C |
OXT |
HXT |
180.0 |
180.0 |
HA |
CA |
N |
H |
123.0 |
180.0 |
HA |
CA |
N |
H2 |
243.0 |
304.0 |
N |
CA |
HA |
CB |
240.4 |
240.0 |
N |
CA |
HA |
C |
118.8 |
120.1 |
CB |
CA |
HA |
C |
238.4 |
240.1 |
HA |
CA |
CB |
HB |
288.9 |
184.2 |
HA |
CA |
CB |
HBA |
168.6 |
64.1 |
HA |
CA |
C |
O |
164.8 |
140.0 |
HA |
CA |
C |
OXT |
344.8 |
320.1 |
HB |
CB |
C1 |
H1 |
171.8 |
65.7 |
C1 |
CB |
HB |
CA |
239.3 |
240.0 |
C1 |
CB |
HB |
HBA |
119.7 |
120.0 |
HB |
CB |
CA |
C |
167.8 |
64.2 |
HB |
CB |
CA |
HA |
288.9 |
184.2 |
CA |
CB |
HB |
HBA |
240.3 |
240.0 |
HBA |
CB |
C1 |
H1 |
292.1 |
185.7 |
C1 |
CB |
HBA |
CA |
120.5 |
120.0 |
C1 |
CB |
HBA |
HB |
240.2 |
240.0 |
HBA |
CB |
CA |
C |
47.5 |
304.2 |
HBA |
CB |
CA |
HA |
168.6 |
64.1 |
CA |
CB |
HBA |
HB |
119.8 |
120.0 |
O |
C |
CA |
HA |
164.8 |
140.0 |
CA |
C |
O |
OXT |
180.0 |
180.1 |
O |
C |
OXT |
HXT |
0.0 |
0.0 |
OXT |
C |
CA |
HA |
344.8 |
320.1 |
CA |
C |
OXT |
O |
180.0 |
179.9 |