PDB Chemical Component ZAL

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for ZAL

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.535 1.530
C1 C6 1.533 1.530
C1 CB 1.543 1.530
C1 H1 1.100 1.090
C2 C3 1.517 1.529
C2 H2B 1.099 1.090
C2 H2A 1.100 1.090
C3 C4 1.523 1.530
C3 H3 1.100 1.090
C3 H3A 1.100 1.091
C4 C5 1.527 1.530
C4 H4 1.100 1.090
C4 H4A 1.100 1.090
C5 C6 1.528 1.530
C5 H5 1.100 1.090
C5 H5A 1.101 1.090
C6 H6 1.100 1.090
C6 H6A 1.100 1.091
N CA 1.503 1.468
N H 1.000 1.009
N H2 1.000 1.009
CA CB 1.543 1.531
CA C 1.548 1.506
CA HA 1.100 1.090
CB HB 1.100 1.090
CB HBA 1.100 1.090
C O 1.228 1.208
C OXT 1.430 1.343
OXT HXT 0.950 0.967

Bond Angles for ZAL

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 108.8 109.4
C2 C1 CB 109.4 109.5
C2 C1 H1 110.6 109.4
C1 C2 C3 111.7 109.5
C1 C2 H2B 108.7 109.5
C1 C2 H2A 108.3 109.4
C6 C1 CB 111.5 109.5
C6 C1 H1 108.6 109.5
C1 C6 C5 110.3 109.5
C1 C6 H6 109.2 109.5
C1 C6 H6A 109.0 109.4
CB C1 H1 107.9 109.5
C1 CB CA 110.3 109.5
C1 CB HB 109.2 109.4
C1 CB HBA 109.0 109.5
C3 C2 H2B 108.7 109.5
C3 C2 H2A 108.2 109.5
C2 C3 C4 110.9 109.5
C2 C3 H3 109.0 109.5
C2 C3 H3A 108.7 109.5
H2B C2 H2A 111.2 109.4
C4 C3 H3 109.0 109.5
C4 C3 H3A 108.6 109.4
C3 C4 C5 111.4 109.4
C3 C4 H4 108.8 109.5
C3 C4 H4A 108.4 109.5
H3 C3 H3A 110.6 109.4
C5 C4 H4 108.9 109.5
C5 C4 H4A 108.4 109.5
C4 C5 C6 111.2 109.5
C4 C5 H5 108.9 109.5
C4 C5 H5A 108.5 109.4
H4 C4 H4A 111.0 109.5
C6 C5 H5 108.9 109.5
C6 C5 H5A 108.5 109.5
C5 C6 H6 109.2 109.5
C5 C6 H6A 109.0 109.5
H5 C5 H5A 110.8 109.5
H6 C6 H6A 110.1 109.5
CA N H 109.5 111.0
CA N H2 109.5 111.0
N CA CB 107.8 109.5
N CA C 106.4 109.5
N CA HA 113.0 109.5
H N H2 109.5 111.1
CB CA C 110.9 109.4
CB CA HA 108.7 109.4
CA CB HB 109.2 109.4
CA CB HBA 109.0 109.5
C CA HA 110.0 109.5
CA C O 119.9 120.0
CA C OXT 120.0 120.0
HB CB HBA 110.1 109.5
O C OXT 120.0 120.0
C OXT HXT 109.5 116.9

Torsion Angles for ZAL

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C1 C2 CB 238.0 240.0
C6 C1 C2 H1 119.2 119.9
C2 C1 C6 C5 301.4 300.0
C2 C1 C6 H6 61.4 60.1
C2 C1 C6 H6A 181.8 180.0
CB C1 C2 H1 241.2 240.0
C2 C1 CB CA 172.2 65.7
C2 C1 CB HB 292.3 185.6
C2 C1 CB HBA 52.5 305.7
C3 C2 C1 H2B 240.0 239.9
C3 C2 C1 H2A 119.1 120.0
C1 C2 C3 C4 303.4 300.0
C1 C2 C3 H3 63.4 60.0
C1 C2 C3 H3A 184.0 180.0
H2B C2 C1 H2A 239.1 240.1
C2 C1 C6 CB 120.8 120.0
C2 C1 C6 H1 239.5 240.1
C6 C1 C2 C3 58.6 59.9
C6 C1 C2 H2B 178.6 180.0
C6 C1 C2 H2A 299.5 299.9
CB C1 C6 H1 118.7 120.1
C6 C1 CB CA 292.6 185.7
C6 C1 CB HB 52.6 305.6
C6 C1 CB HBA 172.9 65.7
C4 C5 C6 C1 57.6 60.1
C1 C6 C5 H5 297.6 300.1
C1 C6 C5 H5A 176.9 180.0
C5 C6 C1 H6 240.0 239.9
C5 C6 C1 H6A 119.6 120.0
H6 C6 C1 H6A 239.7 240.1
C2 C1 CB C6 239.6 240.0
C2 C1 CB H1 120.5 120.0
CB C1 C2 C3 180.6 180.0
CB C1 C2 H2B 300.6 300.0
CB C1 C2 H2A 61.5 60.0
C6 C1 CB H1 240.9 240.0
CB C1 C6 C5 180.7 180.0
CB C1 C6 H6 300.7 300.1
CB C1 C6 H6A 61.0 60.0
N CA CB C1 171.7 64.1
C1 CB CA C 287.9 184.2
C1 CB CA HA 48.9 304.1
CA CB C1 HB 240.0 240.1
CA CB C1 HBA 119.7 120.0
HB CB C1 HBA 239.7 239.9
C2 C1 H1 C6 119.3 119.9
C2 C1 H1 CB 240.3 240.0
H1 C1 C2 C3 299.4 300.0
H1 C1 C2 H2B 59.4 60.1
H1 C1 C2 H2A 180.3 180.0
C6 C1 H1 CB 121.0 120.1
H1 C1 C6 C5 61.9 59.9
H1 C1 C6 H6 181.9 180.0
H1 C1 C6 H6A 302.3 299.9
H1 C1 CB CA 51.8 305.7
H1 C1 CB HB 171.8 65.7
H1 C1 CB HBA 292.1 185.7
C3 C2 C1 C6 58.6 59.9
C3 C2 C1 CB 180.6 180.0
C3 C2 C1 H1 299.4 300.0
C1 C2 C3 H2B 120.0 120.0
C1 C2 C3 H2A 240.9 240.0
H2B C2 C3 H2A 120.9 120.0
C4 C3 C2 H3 240.0 240.0
C4 C3 C2 H3A 119.4 120.0
C2 C3 C4 C5 54.1 60.0
C2 C3 C4 H4 174.1 180.0
C2 C3 C4 H4A 294.9 300.1
H3 C3 C2 H3A 239.4 240.0
H2B C2 C1 C6 178.6 180.0
H2B C2 C1 CB 300.6 300.0
H2B C2 C1 H1 59.4 60.1
C1 C2 H2B C3 238.2 240.0
C1 C2 H2B H2A 119.1 119.9
C3 C2 H2B H2A 240.9 240.0
H2B C2 C3 C4 183.4 180.0
H2B C2 C3 H3 303.4 300.0
H2B C2 C3 H3A 64.0 60.0
H2A C2 C1 C6 299.5 299.9
H2A C2 C1 CB 61.5 60.0
H2A C2 C1 H1 180.3 180.0
C1 C2 H2A C3 121.2 120.0
C1 C2 H2A H2B 240.6 240.1
C3 C2 H2A H2B 119.4 120.1
H2A C2 C3 C4 62.5 60.0
H2A C2 C3 H3 182.5 180.0
H2A C2 C3 H3A 303.1 300.0
C4 C3 C2 H2B 183.4 180.0
C4 C3 C2 H2A 62.5 60.0
C2 C3 C4 H3 120.0 120.1
C2 C3 C4 H3A 240.6 240.0
H3 C3 C4 H3A 120.6 119.9
C5 C4 C3 H4 240.0 240.0
C5 C4 C3 H4A 119.2 119.9
C3 C4 C5 C6 305.1 300.0
C3 C4 C5 H5 65.1 60.0
C3 C4 C5 H5A 185.8 180.0
H4 C4 C3 H4A 239.2 239.9
H3 C3 C2 H2B 303.4 300.0
H3 C3 C2 H2A 182.5 180.0
C2 C3 H3 C4 238.8 239.9
C2 C3 H3 H3A 119.4 120.0
C4 C3 H3 H3A 240.6 240.1
H3 C3 C4 C5 294.0 299.9
H3 C3 C4 H4 54.0 59.9
H3 C3 C4 H4A 174.8 180.0
H3A C3 C2 H2B 64.0 60.0
H3A C3 C2 H2A 303.1 300.0
C2 C3 H3A C4 120.8 120.1
C2 C3 H3A H3 240.4 240.0
C4 C3 H3A H3 119.6 119.9
H3A C3 C4 C5 173.4 180.0
H3A C3 C4 H4 293.4 300.0
H3A C3 C4 H4A 54.2 60.1
C1 C6 C5 C4 57.6 60.1
C5 C4 C3 H3 294.0 299.9
C5 C4 C3 H3A 173.4 180.0
C3 C4 C5 H4 120.0 120.0
C3 C4 C5 H4A 240.8 240.1
H4 C4 C5 H4A 120.8 120.1
C6 C5 C4 H5 240.0 240.0
C6 C5 C4 H5A 119.3 120.0
C4 C5 C6 H6 297.6 300.0
C4 C5 C6 H6A 177.3 180.0
H5 C5 C4 H5A 239.3 240.0
H4 C4 C3 H3 54.0 59.9
H4 C4 C3 H3A 293.4 300.0
C3 C4 H4 C5 238.4 240.0
C3 C4 H4 H4A 119.2 120.0
C5 C4 H4 H4A 240.8 240.0
H4 C4 C5 C6 185.1 180.0
H4 C4 C5 H5 305.1 300.0
H4 C4 C5 H5A 65.8 60.0
H4A C4 C3 H3 174.8 180.0
H4A C4 C3 H3A 54.2 60.1
C3 C4 H4A C5 121.1 119.9
C3 C4 H4A H4 240.6 240.0
C5 C4 H4A H4 119.5 120.0
H4A C4 C5 C6 64.3 59.9
H4A C4 C5 H5 184.3 179.9
H4A C4 C5 H5A 305.0 299.9
C5 C6 C1 CB 180.7 180.0
C5 C6 C1 H1 61.9 59.9
C1 C6 C5 H6 120.0 120.0
C1 C6 C5 H6A 240.3 240.1
C6 C5 C4 H4 185.1 180.0
C6 C5 C4 H4A 64.3 59.9
C4 C5 C6 H5 120.0 120.0
C4 C5 C6 H5A 240.7 240.0
H5 C5 C6 H5A 120.7 120.0
H6 C6 C5 H6A 120.3 120.0
H5 C5 C4 H4 305.1 300.0
H5 C5 C4 H4A 184.3 179.9
C4 C5 H5 C6 238.6 240.0
C4 C5 H5 H5A 119.3 120.0
C6 C5 H5 H5A 240.7 240.0
H5 C5 C6 H6 177.6 180.0
H5 C5 C6 H6A 57.3 60.0
H5A C5 C4 H4 65.8 60.0
H5A C5 C4 H4A 305.0 299.9
C4 C5 H5A C6 121.0 120.0
C4 C5 H5A H5 240.5 240.0
C6 C5 H5A H5 119.5 120.0
H5A C5 C6 H6 56.9 60.0
H5A C5 C6 H6A 296.5 300.0
H6 C6 C1 CB 300.7 300.1
H6 C6 C1 H1 181.9 180.0
C1 C6 H6 C5 239.3 239.9
C1 C6 H6 H6A 119.7 119.9
H6 C6 C5 H5 177.6 180.0
H6 C6 C5 H5A 56.9 60.0
C5 C6 H6 H6A 240.4 240.0
H6A C6 C1 CB 61.0 60.0
H6A C6 C1 H1 302.3 299.9
C1 C6 H6A C5 120.5 120.0
C1 C6 H6A H6 240.2 240.1
H6A C6 C5 H5 57.3 60.0
H6A C6 C5 H5A 296.5 300.0
C5 C6 H6A H6 119.7 120.1
C1 CB CA N 171.7 64.1
H N CA H2 240.0 236.0
CB CA N C 119.0 120.0
CB CA N HA 239.9 240.1
N CA CB HB 51.7 304.2
N CA CB HBA 291.4 184.1
C CA N HA 120.9 120.1
N CA C O 42.0 20.0
N CA C OXT 222.1 200.0
CA N H H2 120.0 123.9
H N CA CB 2.9 60.0
H N CA C 243.9 300.0
H N CA HA 123.0 180.0
CA N H2 H 240.0 236.1
H2 N CA CB 122.9 184.0
H2 N CA C 3.9 64.0
H2 N CA HA 243.0 304.0
CA CB C1 H1 51.8 305.7
C1 CB CA HB 120.0 120.0
C1 CB CA HBA 240.3 240.0
CB CA N H 2.9 60.0
CB CA N H2 122.9 184.0
N CA CB C 243.9 239.9
N CA CB HA 122.8 120.0
C CA CB HA 238.9 240.0
CB CA C O 285.1 259.9
CB CA C OXT 105.1 80.0
HB CB CA HBA 120.3 120.0
C CA N H 243.9 300.0
C CA N H2 3.9 64.0
N CA C CB 117.0 120.0
N CA C HA 237.2 240.0
CB CA C HA 120.3 119.9
C CA CB HB 167.8 64.2
C CA CB HBA 47.5 304.2
O C CA OXT 180.0 179.9
CA C OXT HXT 180.0 180.0
HA CA N H 123.0 180.0
HA CA N H2 243.0 304.0
N CA HA CB 240.4 240.0
N CA HA C 118.8 120.1
CB CA HA C 238.4 240.1
HA CA CB HB 288.9 184.2
HA CA CB HBA 168.6 64.1
HA CA C O 164.8 140.0
HA CA C OXT 344.8 320.1
HB CB C1 H1 171.8 65.7
C1 CB HB CA 239.3 240.0
C1 CB HB HBA 119.7 120.0
HB CB CA C 167.8 64.2
HB CB CA HA 288.9 184.2
CA CB HB HBA 240.3 240.0
HBA CB C1 H1 292.1 185.7
C1 CB HBA CA 120.5 120.0
C1 CB HBA HB 240.2 240.0
HBA CB CA C 47.5 304.2
HBA CB CA HA 168.6 64.1
CA CB HBA HB 119.8 120.0
O C CA HA 164.8 140.0
CA C O OXT 180.0 180.1
O C OXT HXT 0.0 0.0
OXT C CA HA 344.8 320.1
CA C OXT O 180.0 179.9