PDB Chemical Component Z81
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for Z81
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C2 |
C1 |
1.402 |
1.380 |
C1 |
C3 |
1.401 |
1.383 |
C1 |
H1 |
1.080 |
1.080 |
F1 |
C16 |
1.337 |
1.351 |
C11 |
N1 |
1.351 |
1.318 |
N1 |
C10 |
1.356 |
1.319 |
C18 |
O1 |
1.218 |
1.213 |
C12 |
C2 |
1.397 |
1.394 |
C2 |
H2 |
1.080 |
1.080 |
C17 |
F2 |
1.346 |
1.351 |
N2 |
C19 |
1.298 |
1.296 |
N2 |
C20 |
1.495 |
1.472 |
C14 |
C3 |
1.399 |
1.383 |
C3 |
H3 |
1.080 |
1.079 |
C19 |
N3 |
1.359 |
1.374 |
N3 |
C21 |
1.464 |
1.465 |
N3 |
C18 |
1.362 |
1.349 |
C16 |
C4 |
1.400 |
1.385 |
C4 |
C5 |
1.394 |
1.383 |
C4 |
H4 |
1.080 |
1.080 |
N4 |
C19 |
1.363 |
1.375 |
N4 |
HN4 |
1.001 |
0.971 |
N4 |
HN4A |
1.000 |
0.970 |
C5 |
C17 |
1.397 |
1.382 |
C5 |
H5 |
1.080 |
1.079 |
C15 |
C6 |
1.385 |
1.387 |
C6 |
C10 |
1.390 |
1.382 |
C6 |
H6 |
1.080 |
1.080 |
C7 |
C11 |
1.390 |
1.382 |
C7 |
C15 |
1.393 |
1.387 |
C7 |
H7 |
1.080 |
1.080 |
C12 |
C8 |
1.386 |
1.394 |
C8 |
C14 |
1.387 |
1.380 |
C8 |
H8 |
1.080 |
1.080 |
C16 |
C9 |
1.399 |
1.382 |
C9 |
C13 |
1.398 |
1.393 |
C9 |
H9 |
1.080 |
1.080 |
C10 |
H10 |
1.080 |
1.080 |
C11 |
H11 |
1.079 |
1.081 |
C13 |
C12 |
1.452 |
1.483 |
C13 |
C17 |
1.398 |
1.396 |
C14 |
C20 |
1.532 |
1.507 |
C20 |
C15 |
1.539 |
1.507 |
C20 |
C18 |
1.546 |
1.516 |
C21 |
H21 |
1.100 |
1.090 |
C21 |
H21A |
1.100 |
1.090 |
C21 |
H21B |
1.100 |
1.090 |
Bond Angles for Z81
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C3 |
120.3 |
120.1 |
C2 |
C1 |
H1 |
119.8 |
119.9 |
C3 |
C1 |
H1 |
119.9 |
119.9 |
C1 |
C3 |
H3 |
120.6 |
119.9 |
F1 |
C16 |
C4 |
119.3 |
119.9 |
F1 |
C16 |
C9 |
120.0 |
120.0 |
N1 |
C10 |
C6 |
124.3 |
120.8 |
N1 |
C10 |
H10 |
117.9 |
119.6 |
C12 |
C2 |
H2 |
119.9 |
120.0 |
C19 |
N2 |
C20 |
108.0 |
107.5 |
N2 |
C19 |
N3 |
114.9 |
112.8 |
N2 |
C19 |
N4 |
124.1 |
123.6 |
N2 |
C20 |
C14 |
109.4 |
110.6 |
N2 |
C20 |
C15 |
111.2 |
110.5 |
N2 |
C20 |
C18 |
100.8 |
103.9 |
C14 |
C3 |
H3 |
120.6 |
119.9 |
C19 |
N3 |
C21 |
128.3 |
124.7 |
C18 |
N3 |
C21 |
123.1 |
124.7 |
N3 |
C21 |
H21 |
109.5 |
109.5 |
N3 |
C21 |
H21A |
109.5 |
109.5 |
N3 |
C21 |
H21B |
109.5 |
109.5 |
C16 |
C4 |
H4 |
120.1 |
119.9 |
C5 |
C4 |
H4 |
120.1 |
119.8 |
C4 |
C5 |
C17 |
119.8 |
120.1 |
C4 |
C5 |
H5 |
120.1 |
119.9 |
C19 |
N4 |
HN4 |
120.0 |
119.9 |
C19 |
N4 |
HN4A |
120.0 |
120.0 |
HN4 |
N4 |
HN4A |
120.0 |
120.0 |
C17 |
C5 |
H5 |
120.1 |
120.0 |
C5 |
C17 |
C13 |
120.4 |
119.8 |
C15 |
C6 |
H6 |
121.2 |
120.4 |
C10 |
C6 |
H6 |
121.2 |
120.5 |
C6 |
C10 |
H10 |
117.8 |
119.6 |
C11 |
C7 |
C15 |
118.0 |
119.2 |
C11 |
C7 |
H7 |
121.0 |
120.4 |
C7 |
C11 |
H11 |
118.1 |
119.6 |
C15 |
C7 |
H7 |
121.0 |
120.4 |
C12 |
C8 |
C14 |
120.9 |
119.9 |
C12 |
C8 |
H8 |
119.5 |
120.0 |
C14 |
C8 |
H8 |
119.6 |
120.1 |
C8 |
C14 |
C20 |
117.2 |
119.9 |
C16 |
C9 |
H9 |
120.4 |
120.1 |
C13 |
C9 |
H9 |
120.4 |
120.0 |
C9 |
C13 |
C12 |
119.1 |
120.2 |
C9 |
C13 |
C17 |
120.1 |
119.8 |
C14 |
C20 |
C15 |
111.6 |
110.5 |
C14 |
C20 |
C18 |
109.6 |
110.6 |
H21 |
C21 |
H21A |
109.5 |
109.5 |
H21 |
C21 |
H21B |
109.5 |
109.4 |
H21A |
C21 |
H21B |
109.5 |
109.5 |
Torsion Angles for Z81
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C3 |
C1 |
C2 |
H1 |
180.0 |
180.3 |
C2 |
C1 |
C3 |
H3 |
180.4 |
179.7 |
C2 |
C1 |
C3 |
H1 |
180.0 |
179.7 |
C14 |
C3 |
C1 |
H3 |
180.0 |
180.1 |
C2 |
C1 |
H1 |
C3 |
180.0 |
180.2 |
H1 |
C1 |
C3 |
H3 |
0.4 |
359.9 |
F1 |
C16 |
C4 |
H4 |
0.5 |
0.3 |
F1 |
C16 |
C9 |
H9 |
359.5 |
0.3 |
C11 |
N1 |
C10 |
H10 |
180.3 |
180.1 |
N1 |
C10 |
C6 |
H6 |
179.7 |
179.9 |
C6 |
C10 |
N1 |
H10 |
180.0 |
180.0 |
C12 |
C2 |
C1 |
H1 |
179.5 |
179.8 |
H2 |
C2 |
C1 |
C3 |
179.6 |
179.9 |
H2 |
C2 |
C1 |
H1 |
359.6 |
359.7 |
C19 |
N2 |
C20 |
C14 |
120.7 |
118.6 |
C19 |
N2 |
C20 |
C15 |
244.4 |
241.2 |
C19 |
N2 |
C20 |
C18 |
5.3 |
360.0 |
N2 |
C19 |
N3 |
C21 |
184.1 |
180.0 |
N2 |
C19 |
N4 |
HN4 |
0.0 |
360.0 |
N2 |
C19 |
N4 |
HN4A |
180.0 |
180.0 |
C20 |
N2 |
C19 |
N3 |
353.5 |
0.0 |
C20 |
N2 |
C19 |
N4 |
174.7 |
180.0 |
C8 |
C14 |
C20 |
N2 |
308.8 |
14.3 |
C14 |
C20 |
N2 |
C15 |
236.3 |
237.4 |
C14 |
C20 |
N2 |
C18 |
115.4 |
118.7 |
C14 |
C3 |
C1 |
H1 |
180.4 |
180.0 |
C1 |
C3 |
C14 |
H3 |
180.0 |
179.9 |
N2 |
C20 |
C14 |
C3 |
129.6 |
194.9 |
H3 |
C3 |
C1 |
H1 |
0.4 |
359.9 |
N3 |
C19 |
N2 |
C20 |
353.5 |
0.0 |
N2 |
C19 |
N3 |
N4 |
181.1 |
180.0 |
C18 |
N3 |
C19 |
C21 |
180.6 |
180.0 |
C19 |
N3 |
C21 |
H21 |
180.0 |
270.0 |
C19 |
N3 |
C21 |
H21A |
300.0 |
30.0 |
C19 |
N3 |
C21 |
H21B |
60.0 |
150.0 |
H21 |
C21 |
N3 |
H21A |
239.9 |
239.9 |
H21 |
C21 |
N3 |
H21B |
120.0 |
120.0 |
H21A |
C21 |
N3 |
H21B |
240.0 |
240.0 |
N2 |
C19 |
N3 |
C18 |
4.7 |
360.0 |
N2 |
C20 |
C18 |
N3 |
357.4 |
0.0 |
C19 |
N3 |
C18 |
C21 |
179.4 |
180.0 |
C18 |
N3 |
C21 |
H21 |
359.3 |
90.0 |
C18 |
N3 |
C21 |
H21A |
119.3 |
210.0 |
C18 |
N3 |
C21 |
H21B |
239.3 |
330.0 |
C14 |
C20 |
C18 |
N3 |
242.1 |
241.4 |
F1 |
C16 |
C4 |
C9 |
180.7 |
180.0 |
C5 |
C4 |
C16 |
H4 |
180.0 |
179.6 |
C16 |
C4 |
C5 |
C17 |
0.2 |
0.4 |
C16 |
C4 |
C5 |
H5 |
180.2 |
180.3 |
F1 |
C16 |
C4 |
C5 |
180.5 |
179.9 |
C16 |
C4 |
C5 |
H4 |
180.0 |
180.4 |
C17 |
C5 |
C4 |
H5 |
180.0 |
180.1 |
C4 |
C5 |
C17 |
C13 |
359.8 |
359.9 |
H4 |
C4 |
C5 |
C17 |
180.2 |
180.0 |
H4 |
C4 |
C5 |
H5 |
0.2 |
359.9 |
N4 |
C19 |
N2 |
C20 |
174.7 |
180.0 |
N2 |
C19 |
N4 |
N3 |
178.7 |
180.0 |
N4 |
C19 |
N3 |
C21 |
2.9 |
0.0 |
HN4 |
N4 |
C19 |
HN4A |
180.0 |
180.0 |
C19 |
N4 |
HN4 |
HN4A |
180.0 |
180.0 |
C19 |
N4 |
HN4A |
HN4 |
180.0 |
180.0 |
C17 |
C5 |
C4 |
H4 |
180.2 |
180.0 |
C4 |
C5 |
C17 |
H5 |
180.0 |
179.9 |
C9 |
C13 |
C17 |
C5 |
0.2 |
359.5 |
H5 |
C5 |
C4 |
H4 |
0.2 |
359.9 |
C4 |
C5 |
H5 |
C17 |
180.0 |
180.1 |
H5 |
C5 |
C17 |
C13 |
179.8 |
180.0 |
N2 |
C20 |
C15 |
C6 |
149.1 |
342.6 |
C10 |
C6 |
C15 |
H6 |
180.0 |
180.0 |
C15 |
C6 |
C10 |
H10 |
179.6 |
180.0 |
N1 |
C10 |
C6 |
H10 |
180.0 |
180.0 |
C15 |
C6 |
C10 |
H6 |
180.0 |
180.0 |
H6 |
C6 |
C10 |
H10 |
359.7 |
360.0 |
C15 |
C7 |
C11 |
H7 |
180.0 |
180.0 |
N2 |
C20 |
C15 |
C7 |
328.3 |
162.5 |
C7 |
C15 |
C6 |
H6 |
180.3 |
180.0 |
C11 |
C7 |
C15 |
H7 |
180.0 |
180.0 |
C15 |
C7 |
C11 |
H11 |
180.4 |
180.1 |
C14 |
C20 |
C15 |
C7 |
90.7 |
285.2 |
C11 |
C7 |
H7 |
C15 |
180.0 |
180.0 |
H7 |
C7 |
C11 |
H11 |
0.4 |
0.1 |
C8 |
C12 |
C2 |
H2 |
180.5 |
180.1 |
C14 |
C8 |
C12 |
H8 |
180.0 |
180.5 |
C12 |
C8 |
C14 |
C20 |
181.1 |
180.1 |
N2 |
C20 |
C14 |
C8 |
308.8 |
14.3 |
C8 |
C14 |
C3 |
H3 |
179.7 |
180.6 |
C12 |
C8 |
C14 |
H8 |
180.0 |
179.5 |
C8 |
C14 |
C20 |
C15 |
185.4 |
251.6 |
C8 |
C14 |
C20 |
C18 |
58.5 |
128.8 |
C12 |
C8 |
H8 |
C14 |
180.0 |
180.5 |
H8 |
C8 |
C14 |
C20 |
1.1 |
0.6 |
F1 |
C16 |
C9 |
C4 |
179.2 |
180.0 |
C9 |
C16 |
C4 |
H4 |
179.7 |
180.3 |
C13 |
C9 |
C16 |
H9 |
180.0 |
179.1 |
C16 |
C9 |
C13 |
C17 |
359.7 |
0.8 |
F1 |
C16 |
C9 |
C13 |
179.5 |
179.5 |
C5 |
C17 |
C13 |
C9 |
0.2 |
359.5 |
C16 |
C9 |
C13 |
H9 |
180.0 |
180.9 |
H9 |
C9 |
C13 |
C12 |
0.1 |
0.0 |
H9 |
C9 |
C13 |
C17 |
179.8 |
180.0 |
N1 |
C10 |
H10 |
C6 |
180.0 |
180.0 |
H10 |
C10 |
C6 |
H6 |
359.7 |
360.0 |
H11 |
C11 |
C7 |
C15 |
180.4 |
180.1 |
H11 |
C11 |
C7 |
H7 |
0.4 |
0.1 |
C13 |
C12 |
C2 |
H2 |
0.0 |
0.0 |
C5 |
C17 |
C13 |
C12 |
179.8 |
179.4 |
C13 |
C12 |
C8 |
C14 |
180.0 |
180.3 |
C13 |
C12 |
C8 |
H8 |
360.0 |
359.8 |
C12 |
C13 |
C9 |
H9 |
0.1 |
0.0 |
C9 |
C13 |
C12 |
C17 |
179.6 |
179.9 |
C13 |
C17 |
C5 |
H5 |
179.8 |
180.0 |
C17 |
C13 |
C9 |
H9 |
179.8 |
180.0 |
C9 |
C13 |
C17 |
C12 |
180.4 |
180.1 |
N2 |
C20 |
C14 |
C15 |
123.4 |
122.7 |
N2 |
C20 |
C14 |
C18 |
250.3 |
245.5 |
C20 |
C14 |
C3 |
H3 |
358.9 |
360.0 |
C20 |
C14 |
C8 |
H8 |
1.1 |
0.6 |
N2 |
C20 |
C15 |
C14 |
237.6 |
237.3 |
N2 |
C20 |
C15 |
C18 |
113.0 |
114.5 |
C20 |
C15 |
C6 |
H6 |
359.6 |
360.0 |
C20 |
C15 |
C7 |
H7 |
0.4 |
0.1 |
C14 |
C20 |
C15 |
C18 |
235.4 |
237.2 |
N2 |
C20 |
C18 |
C14 |
115.3 |
118.6 |
N2 |
C20 |
C18 |
C15 |
240.9 |
241.4 |
C20 |
C18 |
N3 |
C21 |
179.8 |
180.0 |
C14 |
C20 |
C18 |
C15 |
125.7 |
122.7 |
N3 |
C21 |
H21 |
H21A |
120.0 |
120.0 |
N3 |
C21 |
H21 |
H21B |
240.0 |
240.0 |
H21A |
C21 |
H21 |
H21B |
120.0 |
120.0 |
N3 |
C21 |
H21A |
H21 |
239.9 |
239.9 |
N3 |
C21 |
H21A |
H21B |
120.0 |
120.0 |
H21 |
C21 |
H21A |
H21B |
240.0 |
240.0 |
N3 |
C21 |
H21B |
H21 |
120.0 |
120.0 |
N3 |
C21 |
H21B |
H21A |
240.0 |
240.0 |
H21 |
C21 |
H21B |
H21A |
120.0 |
120.0 |