PDB Chemical Component Z76

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for Z76

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C2 C1 1.426 1.397
C1 C6 1.426 1.381
C1 H1 1.080 1.080
F1 C21 1.332 1.351
C9 N1 1.457 1.474
C8 N1 1.463 1.470
N1 C7 1.373 1.348
C7 O1 1.230 1.216
O7 S1 1.431 1.422
C40 S1 1.771 1.763
S1 N4 1.759 1.656
S1 O6 1.432 1.421
C7 C2 1.476 1.479
C3 C2 1.432 1.394
F2 C23 1.335 1.351
C16 N2 1.469 1.465
N2 C15 1.353 1.348
N2 HN2 1.000 0.970
O2 C15 1.229 1.215
C3 C4 1.420 1.393
C3 H3 1.080 1.080
C29 N3 1.470 1.469
N3 C28 1.466 1.469
N3 HN3 1.000 1.009
O3 C17 1.435 1.428
O3 HO3 0.950 0.967
C15 C4 1.466 1.479
C4 C5 1.428 1.397
C25 N4 1.483 1.471
N4 C27 1.482 1.471
C5 C6 1.428 1.381
C5 H5 1.080 1.080
C12 O5 1.421 1.429
O5 C34 1.424 1.429
C6 C14 1.472 1.507
C11 C8 1.535 1.544
C12 C8 1.537 1.531
C8 H8 1.100 1.090
C10 C9 1.509 1.549
C9 H9 1.100 1.090
C9 H9A 1.100 1.090
C10 C11 1.528 1.553
C10 H10 1.100 1.091
C10 H10A 1.100 1.090
C11 H11 1.100 1.090
C11 H11A 1.100 1.090
C12 H12 1.100 1.090
C12 H12A 1.100 1.089
C14 H14 1.100 1.090
C14 H14A 1.100 1.090
C14 H14B 1.100 1.090
C18 C16 1.538 1.531
C16 C17 1.556 1.530
C16 H16 1.100 1.089
C17 C29 1.549 1.530
C17 H17 1.100 1.090
C19 C18 1.520 1.507
C18 H18 1.100 1.089
C18 H18A 1.100 1.089
C24 C19 1.427 1.383
C20 C19 1.426 1.382
C21 C20 1.426 1.384
C20 H20 1.080 1.080
C22 C21 1.419 1.385
C22 C23 1.421 1.385
C22 H22 1.080 1.080
C23 C24 1.426 1.384
C24 H24 1.080 1.080
C25 C29 1.536 1.532
C25 H25 1.100 1.091
C25 H25A 1.101 1.091
C27 C28 1.517 1.532
C27 H27 1.100 1.090
C27 H27A 1.100 1.090
C28 H28 1.100 1.090
C28 H28A 1.100 1.089
C29 H29 1.100 1.090
C32 C38 1.468 1.506
C32 H32 1.100 1.090
C32 H32A 1.100 1.090
C32 H32B 1.100 1.090
C34 H34 1.100 1.091
C34 H34A 1.100 1.091
C34 H34B 1.100 1.090
C40 C35 1.425 1.382
C36 C35 1.424 1.383
C35 H35 1.080 1.080
C37 C36 1.423 1.382
C36 H36 1.080 1.080
C38 C37 1.423 1.382
C37 H37 1.080 1.081
C38 C39 1.424 1.383
C39 C40 1.423 1.382
C39 H39 1.080 1.080

Bond Angles for Z76

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 120.0 120.1
C2 C1 H1 120.0 119.9
C6 C1 H1 120.0 119.9
C1 C6 C5 120.2 120.3
C1 C6 C14 119.9 119.9
F1 C21 C20 120.1 120.0
N1 C7 O1 120.8 120.0
N1 C7 C2 116.4 120.0
N4 S1 O6 105.5 106.4
S1 N4 C27 116.5 120.9
F2 C23 C22 119.7 120.0
F2 C23 C24 120.2 120.0
C16 N2 HN2 121.0 120.0
C15 N2 HN2 121.0 120.0
N2 C15 O2 122.2 120.0
N2 C15 C4 114.3 120.0
O2 C15 C4 123.5 120.0
C4 C3 H3 119.6 120.2
C3 C4 C5 119.7 119.9
C29 N3 HN3 109.7 111.0
C28 N3 HN3 109.6 111.0
N3 C28 C27 109.4 109.3
N3 C28 H28 109.5 109.5
N3 C28 H28A 109.5 109.5
C17 O3 HO3 109.5 114.0
O3 C17 C16 108.9 109.5
O3 C17 C29 108.8 109.5
O3 C17 H17 111.3 109.5
C4 C5 C6 119.9 120.1
C4 C5 H5 120.0 120.0
C25 N4 C27 109.3 118.2
N4 C27 C28 111.4 108.6
N4 C27 H27 108.8 109.6
N4 C27 H27A 108.8 109.6
C6 C5 H5 120.0 119.9
C5 C6 C14 119.9 119.9
C12 O5 C34 111.2 114.0
O5 C34 H34 109.5 109.5
O5 C34 H34A 109.5 109.4
O5 C34 H34B 109.5 109.5
C6 C14 H14 109.5 109.5
C6 C14 H14A 109.5 109.5
C6 C14 H14B 109.5 109.5
C11 C8 H8 112.9 109.9
C12 C8 H8 107.9 109.8
C10 C9 H9 110.7 110.4
C10 C9 H9A 110.6 110.5
H9 C9 H9A 108.3 110.3
C11 C10 H10 111.2 110.9
C11 C10 H10A 111.2 111.1
C10 C11 H11 109.2 110.7
C10 C11 H11A 109.2 110.7
H10 C10 H10A 107.7 111.0
H11 C11 H11A 109.7 110.8
H12 C12 H12A 109.8 109.6
H14 C14 H14A 109.4 109.5
H14 C14 H14B 109.5 109.5
H14A C14 H14B 109.5 109.4
C18 C16 H16 110.2 109.5
C17 C16 H16 108.7 109.5
C16 C17 C29 112.4 109.4
C16 C17 H17 107.7 109.4
C29 C17 H17 107.8 109.5
C17 C29 C25 110.9 109.5
C17 C29 H29 110.5 109.5
C19 C18 H18 108.8 109.5
C19 C18 H18A 108.8 109.4
H18 C18 H18A 110.1 109.6
C21 C20 H20 120.0 120.0
C23 C22 H22 120.1 120.0
C22 C23 C24 120.2 120.0
C23 C24 H24 120.0 120.0
C29 C25 H25 108.4 109.6
C29 C25 H25A 108.4 109.7
C25 C29 H29 107.2 109.5
H25 C25 H25A 110.5 109.7
C28 C27 H27 108.8 109.6
C28 C27 H27A 108.8 109.7
C27 C28 H28 109.5 109.5
C27 C28 H28A 109.5 109.5
H27 C27 H27A 110.1 109.7
H28 C28 H28A 109.4 109.5
C38 C32 H32 109.5 109.5
C38 C32 H32A 109.5 109.5
C38 C32 H32B 109.5 109.4
C32 C38 C37 119.9 120.1
C32 C38 C39 120.0 120.0
H32 C32 H32A 109.4 109.5
H32 C32 H32B 109.5 109.4
H32A C32 H32B 109.5 109.4
H34 C34 H34A 109.4 109.4
H34 C34 H34B 109.5 109.5
H34A C34 H34B 109.5 109.5
C40 C35 H35 119.9 120.1
C36 C35 H35 120.0 119.9
C37 C36 H36 120.0 120.0
C38 C37 H37 119.9 120.0
C38 C39 C40 119.9 120.0
C38 C39 H39 120.1 120.0
C40 C39 H39 120.1 120.0

Torsion Angles for Z76

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C1 C2 H1 180.0 180.2
C2 C1 C6 C5 0.2 0.1
C2 C1 C6 C14 180.2 179.7
C2 C1 C6 H1 180.0 179.8
C4 C5 C6 C1 0.0 359.9
C1 C6 C5 H5 180.0 180.0
C5 C6 C1 C14 180.0 180.4
C1 C6 C14 H14 90.0 90.1
C1 C6 C14 H14A 210.0 210.1
C1 C6 C14 H14B 330.0 330.1
C2 C1 H1 C6 180.0 180.2
H1 C1 C6 C5 180.2 180.3
H1 C1 C6 C14 0.1 359.9
F1 C21 C20 H20 360.0 0.1
N1 C7 O1 C2 180.4 180.0
O7 S1 N4 C27 178.9 336.5
C25 N4 S1 C27 131.1 180.1
S1 N4 C27 C28 189.8 231.2
S1 N4 C27 H27 309.8 350.9
S1 N4 C27 H27A 69.8 111.5
O6 S1 N4 C27 50.8 203.5
C7 C2 C1 H1 0.4 359.7
N1 C7 C2 O1 179.6 180.0
C3 C2 C1 C6 359.6 360.0
C3 C2 C1 H1 179.6 179.8
N1 C7 C2 C3 59.2 27.4
F2 C23 C22 H22 359.9 360.0
C22 C23 F2 C24 180.0 179.8
F2 C23 C24 H24 0.1 0.1
C15 N2 C16 HN2 180.0 180.0
C16 N2 C15 HN2 180.0 180.0
O2 C15 N2 C4 179.8 180.1
HN2 N2 C15 O2 180.3 180.0
HN2 N2 C15 C4 0.5 360.0
O2 C15 N2 HN2 180.3 180.0
N2 C15 O2 C4 180.3 179.9
N2 C15 C4 C3 31.3 180.0
O2 C15 C4 C3 211.5 360.0
C3 C4 C5 C6 360.0 0.1
C3 C4 C5 H5 180.0 180.0
H3 C3 C4 C5 179.8 180.0
C28 N3 C29 HN3 240.0 235.8
C29 N3 C28 H28 182.4 183.0
C29 N3 C28 H28A 302.4 303.1
C29 N3 C28 HN3 120.0 124.1
N4 C27 C28 N3 298.6 306.2
N3 C28 C27 H27 178.5 186.4
N3 C28 C27 H27A 58.6 65.9
C27 C28 N3 H28 240.0 240.0
C27 C28 N3 H28A 120.0 119.9
H28 C28 N3 H28A 240.0 239.9
HN3 N3 C28 C27 302.4 299.0
HN3 N3 C28 H28 62.4 58.9
HN3 N3 C28 H28A 182.4 179.0
O3 C17 C16 H16 69.1 175.0
C16 C17 O3 C29 237.2 240.0
C16 C17 O3 H17 118.6 120.0
C29 C17 O3 H17 241.4 240.0
O3 C17 C29 C25 307.9 60.0
O3 C17 C29 H29 189.2 299.9
HO3 O3 C17 C16 180.0 300.0
HO3 O3 C17 C29 302.8 60.0
HO3 O3 C17 H17 61.4 180.0
C4 C15 N2 HN2 0.5 360.0
N2 C15 C4 O2 179.8 180.1
C15 C4 C3 H3 359.5 360.0
C15 C4 C5 H5 0.3 360.0
C1 C6 C5 C4 0.0 359.9
N2 C15 C4 C5 210.9 0.0
O2 C15 C4 C5 31.2 180.0
C5 C4 C3 H3 179.8 180.0
C6 C5 C4 H5 180.0 180.1
C4 C5 C6 C14 180.1 180.3
S1 N4 C25 C27 225.6 179.9
C25 N4 C27 C28 55.5 51.2
C25 N4 C27 H27 175.4 170.9
C25 N4 C27 H27A 295.4 291.4
C27 N4 S1 O6 50.8 203.5
N3 C28 C27 N4 298.6 306.2
C28 C27 N4 H27 240.0 240.3
C28 C27 N4 H27A 120.0 119.8
N4 C27 C28 H28 178.6 186.2
N4 C27 C28 H28A 58.6 66.1
H27 C27 N4 H27A 240.0 239.5
C5 C6 C1 H1 180.2 180.3
C1 C6 C5 C14 180.0 179.6
C4 C5 C6 H5 180.0 179.9
C5 C6 C14 H14 270.0 269.7
C5 C6 C14 H14A 30.0 29.7
C5 C6 C14 H14B 150.0 149.7
C4 C5 H5 C6 180.0 180.1
H5 C5 C6 C14 0.1 0.4
C12 O5 C34 H34 180.0 180.0
C12 O5 C34 H34A 300.0 299.9
C12 O5 C34 H34B 60.0 60.0
H34 C34 O5 H34A 240.0 240.0
H34 C34 O5 H34B 120.1 120.0
H34A C34 O5 H34B 240.0 240.0
C14 C6 C1 H1 0.1 359.9
C1 C6 C14 C5 180.0 180.4
C14 C6 C5 H5 0.1 0.4
H14 C14 C6 H14A 240.0 240.0
H14 C14 C6 H14B 120.0 120.0
H14A C14 C6 H14B 240.0 240.0
C12 C8 C11 H8 238.2 239.0
C8 C12 O5 C34 195.9 180.1
C11 C8 C12 H8 124.6 121.1
H9 C9 C10 H9A 120.0 122.3
C10 C9 H9 H9A 238.6 237.6
C10 C9 H9A H9 121.4 122.3
C10 C11 C8 H8 214.8 262.6
C11 C10 C9 H9 248.4 278.3
C11 C10 C9 H9A 128.4 156.0
H10 C10 C11 H10A 120.0 123.9
H11 C11 C10 H11A 120.0 123.3
H10 C10 C9 H9 8.4 36.2
H10 C10 C9 H9A 248.4 273.9
C11 C10 H10 H10A 238.0 236.0
H10 C10 C11 H11 126.7 88.2
H10 C10 C11 H11A 6.7 324.9
H10A C10 C9 H9 128.4 160.1
H10A C10 C9 H9A 8.4 37.8
C11 C10 H10A H10 122.1 123.9
H10A C10 C11 H11 6.7 324.2
H10A C10 C11 H11A 246.7 200.9
H11 C11 C8 H8 334.8 20.9
H11 C11 C10 H10 126.7 88.2
H11 C11 C10 H10A 6.7 324.2
C10 C11 H11 H11A 240.3 236.7
H11A C11 C8 H8 94.8 144.2
H11A C11 C10 H10 6.7 324.9
H11A C11 C10 H10A 246.7 200.9
C10 C11 H11A H11 119.7 123.2
H12 C12 O5 C34 315.9 300.0
H12 C12 C8 H8 318.9 66.1
H12A C12 O5 C34 75.9 60.1
H12A C12 C8 H8 198.9 306.0
C6 C14 H14 H14A 120.0 120.0
C6 C14 H14 H14B 240.0 240.0
H14A C14 H14 H14B 120.0 120.0
C6 C14 H14A H14 240.0 240.0
C6 C14 H14A H14B 120.0 120.0
H14 C14 H14A H14B 240.0 240.0
C6 C14 H14B H14 120.0 120.0
C6 C14 H14B H14A 240.0 240.0
H14 C14 H14B H14A 120.0 120.0
C18 C16 N2 HN2 312.0 265.0
C17 C16 C18 H16 119.3 120.1
C18 C16 C17 C29 188.2 294.9
C18 C16 C17 H17 69.7 175.0
C17 C16 N2 HN2 72.5 25.0
C16 C17 O3 HO3 180.0 300.0
O3 C17 C16 C29 120.7 120.0
O3 C17 C16 H17 239.2 240.0
C18 C16 C17 H16 239.8 239.9
C29 C17 C16 H17 118.5 119.9
C16 C17 C29 C25 68.7 180.0
C16 C17 C29 H29 310.0 60.0
H16 C16 N2 HN2 191.8 145.0
H16 C16 C17 C29 308.4 55.0
H16 C16 C17 H17 189.9 295.0
C17 C29 N3 HN3 300.2 301.1
C29 C17 O3 HO3 302.8 60.0
O3 C17 C29 C16 239.3 240.0
O3 C17 C29 H17 120.8 120.0
C29 C17 C16 H16 308.4 55.0
C16 C17 C29 H17 241.5 240.1
C17 C29 C25 H25 53.4 54.1
C17 C29 C25 H25A 293.4 293.6
C25 C29 C17 H29 118.7 120.0
H17 C17 O3 HO3 61.4 180.0
O3 C17 H17 C16 119.3 120.0
O3 C17 H17 C29 240.8 240.0
H17 C17 C16 H16 189.9 295.0
C16 C17 H17 C29 121.4 119.9
H17 C17 C29 C25 187.2 299.9
H17 C17 C29 H29 68.5 179.9
C19 C18 C16 H16 66.5 54.9
H18 C18 C19 H18A 120.0 120.1
H18 C18 C16 H16 186.5 174.9
C19 C18 H18 H18A 240.8 240.0
H18A C18 C16 H16 306.5 295.0
C19 C18 H18A H18 119.2 120.0
F2 C23 C24 C19 180.1 180.3
C24 C19 C18 H18 180.2 149.8
C24 C19 C18 H18A 60.2 29.7
F1 C21 C20 C19 180.0 180.0
C20 C19 C18 H18 0.4 330.0
C20 C19 C18 H18A 240.4 209.9
F2 C23 C22 C21 179.9 180.0
C22 C21 C20 H20 180.0 180.1
F2 C23 C22 C24 180.0 180.2
C22 C23 C24 H24 180.2 180.3
H22 C22 C23 C24 179.9 179.8
F2 C23 C24 C22 180.0 179.8
C24 C23 C22 H22 179.9 179.8
C25 C29 N3 HN3 60.8 61.1
C29 C25 N4 C27 307.5 308.9
C25 C29 C17 H17 187.2 299.9
C17 C29 C25 H29 239.3 240.0
H25 C25 C29 H25A 120.0 120.5
H25 C25 N4 C27 67.5 68.6
C29 C25 H25 H25A 241.3 239.6
H25 C25 C29 H29 174.2 174.1
H25A C25 N4 C27 187.5 189.1
C29 C25 H25A H25 118.7 120.4
H25A C25 C29 H29 54.1 53.6
C27 C28 N3 HN3 302.4 299.0
N3 C28 C27 H28 120.0 119.9
N3 C28 C27 H28A 240.0 240.1
N4 C27 C28 H27 120.0 119.7
N4 C27 C28 H27A 240.0 240.3
H27 C27 C28 H27A 120.0 120.5
H28 C28 C27 H28A 120.0 120.1
N4 C27 H27 C28 238.4 240.9
N4 C27 H27 H27A 119.2 120.4
C28 C27 H27 H27A 240.8 239.5
H27 C27 C28 H28 58.5 66.5
H27 C27 C28 H28A 298.6 306.4
N4 C27 H27A C28 121.6 119.1
N4 C27 H27A H27 240.8 239.6
C28 C27 H27A H27 119.2 120.5
H27A C27 C28 H28 298.6 305.9
H27A C27 C28 H28A 178.6 185.8
H28 C28 N3 HN3 62.4 58.9
N3 C28 H28 C27 240.1 240.2
N3 C28 H28 H28A 120.0 120.1
H28 C28 C27 H27 58.5 66.5
H28 C28 C27 H27A 298.6 305.9
C27 C28 H28 H28A 240.0 239.9
H28A C28 N3 HN3 182.4 179.0
N3 C28 H28A C27 119.9 119.8
N3 C28 H28A H28 240.0 239.9
H28A C28 C27 H27 298.6 306.4
H28A C28 C27 H27A 178.6 185.8
C27 C28 H28A H28 120.1 120.1
H29 C29 N3 HN3 179.5 181.0
H29 C29 C17 H17 68.5 179.9
C17 C29 H29 C25 121.0 120.1
H29 C29 C25 H25 174.2 174.1
H29 C29 C25 H25A 54.1 53.6
H32 C32 C38 H32A 240.0 239.9
H32 C32 C38 H32B 120.0 120.0
H32A C32 C38 H32B 240.0 240.0
C32 C38 C37 H37 0.0 0.1
C32 C38 C39 C40 180.0 179.8
C32 C38 C39 H39 360.0 360.0
C38 C32 H32 H32A 120.0 120.1
C38 C32 H32 H32B 240.0 240.0
H32 C32 C38 C37 90.0 89.9
H32 C32 C38 C39 270.0 270.0
H32A C32 H32 H32B 120.0 119.9
C38 C32 H32A H32 240.0 239.9
C38 C32 H32A H32B 120.0 120.0
H32A C32 C38 C37 210.0 210.0
H32A C32 C38 C39 30.0 30.1
H32 C32 H32A H32B 240.0 240.1
C38 C32 H32B H32 120.0 120.0
C38 C32 H32B H32A 240.0 240.0
H32B C32 C38 C37 330.0 330.0
H32B C32 C38 C39 150.0 150.1
H32 C32 H32B H32A 120.0 120.0
O5 C34 H34 H34A 120.0 120.0
O5 C34 H34 H34B 240.0 240.0
H34A C34 H34 H34B 120.0 120.0
O5 C34 H34A H34 240.0 240.0
O5 C34 H34A H34B 120.0 120.0
H34 C34 H34A H34B 240.0 240.0
O5 C34 H34B H34 120.1 120.0
O5 C34 H34B H34A 240.0 240.0
H34 C34 H34B H34A 120.0 120.0
C36 C35 C40 H35 180.0 179.7
C40 C35 C36 H35 180.0 180.3
C32 C38 C37 C36 180.0 180.0
C37 C36 C35 H35 180.0 180.0
H36 C36 C35 H35 0.0 360.0
C37 C38 C32 H32 90.0 89.9
C37 C38 C32 H32A 210.0 210.0
C37 C38 C32 H32B 330.0 330.0
C32 C38 C37 C39 180.0 180.1
C38 C37 C36 H36 180.0 180.1
H37 C37 C36 H36 360.0 360.0
C39 C38 C32 H32 270.0 270.0
C39 C38 C32 H32A 30.0 30.1
C39 C38 C32 H32B 150.0 150.1
C32 C38 C39 C37 180.0 179.9
C39 C38 C37 H37 180.0 180.0
C40 C39 C38 H39 180.0 179.8
C39 C40 C35 H35 180.0 179.7
C38 C39 C40 H39 180.0 180.2
C38 C39 H39 C40 180.0 179.8