PDB Chemical Component Z3R
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for Z3R
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.398 |
1.387 |
C1 |
C6 |
1.370 |
1.362 |
C2 |
C3 |
1.391 |
1.377 |
C3 |
C4 |
1.400 |
1.393 |
C4 |
C5 |
1.406 |
1.400 |
C4 |
S9 |
1.774 |
1.762 |
C5 |
C6 |
1.432 |
1.412 |
C5 |
N7 |
1.350 |
1.345 |
N7 |
C8 |
1.302 |
1.292 |
C8 |
S9 |
1.746 |
1.758 |
C8 |
C10 |
1.486 |
1.476 |
C10 |
C11 |
1.407 |
1.397 |
C10 |
C14 |
1.347 |
1.348 |
C11 |
C12 |
1.336 |
1.331 |
C12 |
S13 |
1.730 |
1.757 |
C12 |
S15 |
1.766 |
1.762 |
S13 |
C14 |
1.714 |
1.707 |
S15 |
O16 |
1.413 |
1.421 |
S15 |
O17 |
1.432 |
1.420 |
S15 |
N18 |
1.640 |
1.656 |
C1 |
H1 |
1.080 |
1.079 |
C2 |
H2 |
1.080 |
1.080 |
C6 |
H6 |
1.079 |
1.080 |
C3 |
H3 |
1.080 |
1.080 |
C11 |
H11 |
1.080 |
1.080 |
C14 |
H14 |
1.080 |
1.079 |
N18 |
H181 |
1.000 |
0.971 |
N18 |
H182 |
1.000 |
0.970 |
Bond Angles for Z3R
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
120.3 |
120.8 |
C1 |
C2 |
C3 |
121.0 |
120.0 |
C2 |
C1 |
H1 |
119.9 |
119.6 |
C1 |
C2 |
H2 |
119.5 |
120.0 |
C1 |
C6 |
C5 |
120.0 |
120.6 |
C6 |
C1 |
H1 |
119.9 |
119.6 |
C1 |
C6 |
H6 |
120.0 |
119.7 |
C2 |
C3 |
C4 |
119.5 |
120.1 |
C3 |
C2 |
H2 |
119.5 |
120.0 |
C2 |
C3 |
H3 |
120.2 |
119.9 |
C3 |
C4 |
C5 |
120.1 |
120.3 |
C3 |
C4 |
S9 |
130.8 |
131.3 |
C4 |
C3 |
H3 |
120.3 |
120.0 |
C5 |
C4 |
S9 |
109.0 |
108.4 |
C4 |
C5 |
C6 |
119.1 |
118.3 |
C4 |
C5 |
N7 |
111.8 |
112.9 |
C4 |
S9 |
C8 |
90.2 |
90.4 |
C6 |
C5 |
N7 |
129.1 |
128.8 |
C5 |
C6 |
H6 |
120.0 |
119.7 |
C5 |
N7 |
C8 |
118.3 |
117.9 |
N7 |
C8 |
S9 |
110.7 |
110.4 |
N7 |
C8 |
C10 |
126.7 |
124.8 |
S9 |
C8 |
C10 |
122.6 |
124.8 |
C8 |
C10 |
C11 |
123.1 |
122.9 |
C8 |
C10 |
C14 |
123.1 |
122.9 |
C11 |
C10 |
C14 |
113.8 |
114.2 |
C10 |
C11 |
C12 |
113.4 |
113.8 |
C10 |
C11 |
H11 |
123.3 |
123.1 |
C10 |
C14 |
S13 |
110.2 |
110.5 |
C10 |
C14 |
H14 |
124.9 |
124.8 |
C11 |
C12 |
S13 |
110.4 |
109.8 |
C11 |
C12 |
S15 |
129.2 |
125.1 |
C12 |
C11 |
H11 |
123.3 |
123.1 |
S13 |
C12 |
S15 |
120.3 |
125.1 |
C12 |
S13 |
C14 |
92.2 |
91.7 |
C12 |
S15 |
O16 |
101.0 |
106.4 |
C12 |
S15 |
O17 |
107.7 |
106.4 |
C12 |
S15 |
N18 |
105.8 |
107.2 |
S13 |
C14 |
H14 |
124.9 |
124.8 |
O16 |
S15 |
O17 |
122.6 |
123.1 |
O16 |
S15 |
N18 |
109.1 |
106.4 |
O17 |
S15 |
N18 |
109.2 |
106.4 |
S15 |
N18 |
H181 |
109.5 |
120.0 |
S15 |
N18 |
H182 |
109.5 |
120.0 |
H181 |
N18 |
H182 |
109.4 |
120.0 |
Torsion Angles for Z3R
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
C5 |
0.8 |
0.0 |
C6 |
C1 |
C2 |
H1 |
180.0 |
180.3 |
C2 |
C1 |
C6 |
H6 |
180.8 |
180.0 |
C1 |
C2 |
C3 |
C4 |
359.1 |
360.0 |
C3 |
C2 |
C1 |
H2 |
180.0 |
180.0 |
C1 |
C2 |
C3 |
H3 |
179.1 |
180.0 |
C6 |
C1 |
C2 |
C3 |
0.7 |
360.0 |
C2 |
C1 |
C6 |
H1 |
180.0 |
179.7 |
C6 |
C1 |
C2 |
H2 |
180.7 |
180.0 |
C4 |
C5 |
C6 |
C1 |
358.0 |
360.0 |
C1 |
C6 |
C5 |
N7 |
178.2 |
180.0 |
C5 |
C6 |
C1 |
H6 |
180.0 |
180.0 |
C3 |
C2 |
C1 |
C6 |
0.7 |
360.0 |
C3 |
C2 |
C1 |
H1 |
180.6 |
179.7 |
C1 |
C2 |
C3 |
H2 |
180.0 |
180.0 |
C2 |
C3 |
C4 |
C5 |
359.6 |
0.0 |
C2 |
C3 |
C4 |
S9 |
183.0 |
180.0 |
C4 |
C3 |
C2 |
H3 |
180.0 |
180.0 |
C4 |
C3 |
C2 |
H2 |
179.1 |
180.0 |
C2 |
C3 |
C4 |
H3 |
180.0 |
180.0 |
C5 |
C4 |
C3 |
S9 |
176.6 |
180.0 |
C3 |
C4 |
C5 |
C6 |
1.8 |
360.0 |
C3 |
C4 |
C5 |
N7 |
181.6 |
180.0 |
C3 |
C4 |
S9 |
C8 |
177.9 |
180.0 |
C1 |
C6 |
C5 |
C4 |
358.0 |
360.0 |
C3 |
C4 |
C5 |
S9 |
182.7 |
180.0 |
C5 |
C4 |
C3 |
H3 |
179.6 |
180.0 |
C5 |
C4 |
S9 |
C8 |
1.0 |
0.0 |
C6 |
C5 |
C4 |
N7 |
180.1 |
180.0 |
C4 |
C5 |
C6 |
H6 |
178.0 |
180.0 |
C4 |
C5 |
N7 |
C8 |
0.6 |
360.0 |
C3 |
C4 |
S9 |
C5 |
176.9 |
180.0 |
S9 |
C4 |
C3 |
H3 |
3.0 |
360.0 |
S9 |
C4 |
C5 |
C6 |
179.1 |
180.0 |
S9 |
C4 |
C5 |
N7 |
358.9 |
360.0 |
N7 |
C8 |
S9 |
C4 |
359.3 |
360.0 |
C4 |
S9 |
C8 |
C10 |
176.6 |
180.0 |
C5 |
C6 |
C1 |
H1 |
180.8 |
180.3 |
C1 |
C6 |
C5 |
H6 |
180.0 |
180.0 |
C6 |
C5 |
C4 |
S9 |
179.1 |
180.0 |
C4 |
C5 |
C6 |
N7 |
179.8 |
180.0 |
C6 |
C5 |
N7 |
C8 |
180.4 |
180.0 |
N7 |
C5 |
C4 |
S9 |
358.9 |
360.0 |
C4 |
C5 |
N7 |
C6 |
180.2 |
180.0 |
N7 |
C5 |
C6 |
H6 |
358.2 |
0.0 |
C5 |
N7 |
C8 |
S9 |
0.2 |
0.0 |
C5 |
N7 |
C8 |
C10 |
183.0 |
180.0 |
C4 |
S9 |
C8 |
N7 |
359.3 |
360.0 |
S9 |
C8 |
N7 |
C10 |
177.2 |
180.0 |
N7 |
C8 |
C10 |
C11 |
186.9 |
180.0 |
N7 |
C8 |
C10 |
C14 |
6.7 |
359.7 |
N7 |
C8 |
S9 |
C10 |
182.7 |
180.0 |
S9 |
C8 |
C10 |
C11 |
10.0 |
359.9 |
S9 |
C8 |
C10 |
C14 |
189.8 |
179.7 |
N7 |
C8 |
C10 |
S9 |
176.9 |
180.1 |
C11 |
C10 |
C8 |
C14 |
180.2 |
180.3 |
C8 |
C10 |
C11 |
C12 |
181.5 |
180.0 |
C8 |
C10 |
C11 |
H11 |
1.5 |
0.0 |
C8 |
C10 |
C14 |
S13 |
179.2 |
179.8 |
C8 |
C10 |
C14 |
H14 |
359.2 |
360.0 |
C8 |
C10 |
C11 |
C14 |
179.8 |
179.8 |
C11 |
C10 |
C14 |
S13 |
359.0 |
359.6 |
C11 |
C10 |
C14 |
H14 |
179.0 |
179.7 |
C10 |
C11 |
C12 |
S13 |
358.5 |
0.0 |
C10 |
C11 |
C12 |
S15 |
182.2 |
180.0 |
C12 |
C11 |
C10 |
H11 |
180.0 |
180.0 |
C8 |
C10 |
C14 |
C11 |
180.2 |
180.2 |
C14 |
C10 |
C11 |
C12 |
1.7 |
0.2 |
C14 |
C10 |
C11 |
H11 |
181.7 |
180.3 |
C12 |
S13 |
C14 |
C10 |
0.1 |
0.3 |
S13 |
C14 |
C10 |
H14 |
180.0 |
179.9 |
C12 |
C11 |
C10 |
C14 |
1.7 |
0.2 |
C10 |
C11 |
C12 |
H11 |
180.0 |
180.0 |
S13 |
C12 |
C11 |
S15 |
176.3 |
180.0 |
C11 |
C12 |
S13 |
C14 |
0.8 |
359.8 |
C11 |
C12 |
S15 |
O16 |
107.5 |
203.6 |
C11 |
C12 |
S15 |
O17 |
237.1 |
336.5 |
C11 |
C12 |
S15 |
N18 |
353.8 |
90.0 |
C10 |
C14 |
S13 |
C12 |
0.1 |
0.3 |
C11 |
C12 |
S13 |
S15 |
183.3 |
180.0 |
S13 |
C12 |
C11 |
H11 |
178.5 |
180.0 |
S13 |
C12 |
S15 |
O16 |
291.4 |
23.6 |
S13 |
C12 |
S15 |
O17 |
61.1 |
156.5 |
S13 |
C12 |
S15 |
N18 |
177.8 |
270.0 |
C12 |
S13 |
C14 |
H14 |
180.1 |
180.2 |
C11 |
C12 |
S15 |
S13 |
176.0 |
180.0 |
S15 |
C12 |
C11 |
H11 |
2.1 |
360.0 |
S15 |
C12 |
S13 |
C14 |
177.5 |
179.8 |
O16 |
S15 |
C12 |
O17 |
230.4 |
227.1 |
O16 |
S15 |
C12 |
N18 |
113.7 |
113.5 |
O17 |
S15 |
C12 |
N18 |
243.3 |
246.5 |
C12 |
S15 |
N18 |
H181 |
180.0 |
0.0 |
C12 |
S15 |
N18 |
H182 |
300.0 |
180.0 |
C10 |
C14 |
S13 |
H14 |
180.0 |
180.1 |
C14 |
S13 |
C12 |
S15 |
177.5 |
179.8 |
C12 |
S15 |
O16 |
O17 |
119.5 |
123.0 |
C12 |
S15 |
O16 |
N18 |
248.9 |
245.9 |
O17 |
S15 |
O16 |
N18 |
129.4 |
122.9 |
O16 |
S15 |
N18 |
H181 |
72.1 |
246.5 |
O16 |
S15 |
N18 |
H182 |
192.1 |
66.4 |
C12 |
S15 |
O17 |
O16 |
243.8 |
237.0 |
C12 |
S15 |
O17 |
N18 |
114.5 |
114.1 |
O16 |
S15 |
O17 |
N18 |
230.7 |
237.1 |
O17 |
S15 |
N18 |
H181 |
295.7 |
113.6 |
O17 |
S15 |
N18 |
H182 |
55.7 |
293.6 |
C12 |
S15 |
N18 |
O16 |
107.9 |
113.5 |
C12 |
S15 |
N18 |
O17 |
244.3 |
246.4 |
O16 |
S15 |
N18 |
O17 |
136.4 |
132.9 |
H181 |
N18 |
S15 |
H182 |
240.0 |
180.0 |
C2 |
C1 |
H1 |
C6 |
180.0 |
180.3 |
H1 |
C1 |
C2 |
C3 |
180.6 |
179.7 |
H1 |
C1 |
C2 |
H2 |
0.6 |
359.7 |
H1 |
C1 |
C6 |
C5 |
180.8 |
180.3 |
H1 |
C1 |
C6 |
H6 |
0.8 |
0.3 |
H2 |
C2 |
C1 |
C6 |
180.7 |
180.0 |
C1 |
C2 |
H2 |
C3 |
180.0 |
180.0 |
H2 |
C2 |
C1 |
H1 |
0.6 |
359.7 |
H2 |
C2 |
C3 |
C4 |
179.1 |
180.0 |
H2 |
C2 |
C3 |
H3 |
359.2 |
0.0 |
C1 |
C6 |
H6 |
C5 |
180.0 |
180.0 |
H6 |
C6 |
C1 |
H1 |
0.8 |
0.3 |
H6 |
C6 |
C5 |
N7 |
358.2 |
0.0 |
C2 |
C3 |
H3 |
C4 |
180.0 |
180.0 |
H3 |
C3 |
C2 |
H2 |
359.2 |
0.0 |
H3 |
C3 |
C4 |
C5 |
179.6 |
180.0 |
H3 |
C3 |
C4 |
S9 |
3.0 |
360.0 |
H11 |
C11 |
C10 |
C14 |
181.7 |
180.3 |
C10 |
C11 |
H11 |
C12 |
180.0 |
180.0 |
H11 |
C11 |
C12 |
S13 |
178.5 |
180.0 |
H11 |
C11 |
C12 |
S15 |
2.1 |
360.0 |
C10 |
C14 |
H14 |
S13 |
180.0 |
179.9 |
S15 |
N18 |
H181 |
H182 |
120.0 |
180.0 |
S15 |
N18 |
H182 |
H181 |
240.0 |
180.0 |