C21 H29 N6 O12 P
588.462
G
4-(3-[5-O-PHOSPHONORIBOFURANOSYL]-4,6-DIMETHYL-8-OXO-4,8-DIHYDRO-3H-1,3,4,5,7A-PENTAAZA-S-INDACEN-YLAMINO-BUTYRIC ACID
METHYL ESTER
G
N
0
N
1999-10-04
486D
N
2020-06-17
EBI
REL
MODIFIED GUANOSINE-5'-PHOSPHATE
ATOMN
YYG
RNA linking
P
0
5.752
107.848
270.630
1
N
P
YYG
N
1.682
-0.127
-8.592
1
N
P
O1P
0
6.065
106.876
269.558
1
N
OP1
YYG
N
2.467
1.073
-8.228
2
N
O
O2P
0
5.687
109.273
270.166
1
N
OP2
YYG
N
2.680
-1.292
-9.081
3
N
O
O3P
0
4.304
107.366
271.137
1
N
OP3
YYG
Y
0.661
0.238
-9.782
4
N
O
O5*
0
6.605
107.739
271.975
1
N
O5'
YYG
N
0.852
-0.635
-7.310
5
N
O
C5*
0
5.889
108.177
273.172
1
N
C5'
YYG
N
-0.010
0.437
-6.925
6
N
C
C4*
0
6.851
107.958
274.314
1
N
C4'
YYG
N
-0.833
0.017
-5.705
7
R
C
O4*
0
6.553
106.734
274.962
1
N
O4'
YYG
N
0.036
-0.272
-4.589
8
N
O
C3*
0
8.326
107.836
273.928
1
N
C3'
YYG
N
-1.718
1.187
-5.222
9
S
C
O3*
0
9.008
109.081
273.707
1
N
O3'
YYG
N
-3.050
1.046
-5.720
10
N
O
C2*
0
8.896
107.068
275.111
1
N
C2'
YYG
N
-1.699
1.063
-3.681
11
R
C
O2*
0
9.114
108.003
276.148
1
N
O2'
YYG
N
-3.019
0.843
-3.180
12
N
O
C1*
0
7.745
106.128
275.462
1
N
C1'
YYG
N
-0.801
-0.166
-3.417
13
R
C
N9
0
7.972
104.855
274.853
1
Y
N9
YYG
N
0.018
0.048
-2.222
14
N
N
C8
0
7.401
104.414
273.663
1
Y
C8
YYG
N
1.249
0.637
-2.183
15
N
C
N7
0
7.788
103.193
273.326
1
Y
N7
YYG
N
1.683
0.660
-0.957
16
N
N
C5
0
8.631
102.845
274.336
1
Y
C5
YYG
N
0.757
0.088
-0.146
17
N
C
C6
0
9.374
101.647
274.566
1
N
C6
YYG
N
0.696
-0.154
1.248
18
N
C
O6
0
9.364
100.662
273.793
1
N
O6
YYG
N
1.619
0.181
1.968
19
N
O
N1
0
10.138
101.601
275.669
1
Y
N1
YYG
N
-0.387
-0.757
1.774
20
N
N
C2
0
10.153
102.655
276.498
1
Y
C2
YYG
N
-1.430
-1.141
0.981
21
N
C
N2
0
11.060
102.267
277.588
1
Y
N2
YYG
N
-2.342
-1.699
1.747
22
N
N
N3
0
9.507
103.823
276.396
1
N
N3
YYG
N
-1.396
-0.916
-0.380
23
N
N
C3
0
9.636
104.811
277.335
1
N
C3
YYG
N
-2.523
-1.333
-1.219
24
N
C
C4
0
8.762
103.835
275.272
1
Y
C4
YYG
N
-0.308
-0.304
-0.949
25
N
C
C10
0
12.398
100.214
278.062
1
N
C10
YYG
N
-2.675
-2.244
4.203
26
N
C
C11
0
11.446
101.046
277.250
1
Y
C11
YYG
N
-1.918
-1.695
3.021
27
N
C
C12
0
10.888
100.616
276.062
1
Y
C12
YYG
N
-0.709
-1.110
3.066
28
N
C
C13
0
11.089
99.279
275.386
1
N
C13
YYG
N
0.136
-0.890
4.294
29
N
C
C14
0
9.858
98.449
275.661
1
N
C14
YYG
N
-0.198
0.471
4.906
30
N
C
C15
0
10.202
97.151
276.299
1
N
C15
YYG
N
0.659
0.694
6.152
31
S
C
C16
0
9.584
97.035
277.662
1
N
C16
YYG
N
0.329
2.035
6.756
32
N
C
O17
0
8.643
97.759
278.002
1
N
O17
YYG
N
0.936
3.020
6.408
33
N
O
O18
0
10.092
96.064
278.595
1
N
O18
YYG
N
-0.639
2.135
7.679
34
N
O
C19
0
10.814
96.746
279.617
1
N
C19
YYG
N
-0.957
3.427
8.261
35
N
C
N20
0
9.622
96.059
275.478
1
N
N20
YYG
N
0.385
-0.361
7.130
36
N
N
C21
0
8.333
96.087
275.209
1
N
C21
YYG
N
1.352
-0.758
7.981
37
N
C
O22
0
7.561
96.827
275.818
1
N
O22
YYG
N
2.450
-0.240
7.938
38
N
O
O23
0
7.807
95.231
274.190
1
N
O23
YYG
N
1.100
-1.729
8.880
39
N
O
C24
0
6.915
94.279
274.771
1
N
C24
YYG
N
2.141
-2.157
9.797
40
N
C
2HOP
0
5.486
109.896
270.853
0
N
HOP2
YYG
N
3.157
-0.948
-9.848
41
N
H
3HOP
0
4.103
107.989
271.824
0
N
HOP3
YYG
N
0.171
-0.568
-9.988
42
N
H
1H5*
0
5.499
109.219
273.106
1
N
H5'
YYG
N
-0.681
0.677
-7.750
43
N
H
2H5*
0
4.902
107.677
273.313
0
N
H5''
YYG
N
0.587
1.313
-6.677
44
N
H
H4*
0
6.718
108.868
274.943
1
N
H4'
YYG
N
-1.448
-0.850
-5.943
45
N
H
H3*
0
8.455
107.337
272.939
1
N
H3'
YYG
N
-1.294
2.142
-5.535
46
N
H
H3T
0
9.924
109.005
273.467
0
N
HO3'
YYG
Y
-3.554
1.801
-5.388
47
N
H
H2*
0
9.853
106.526
274.928
1
N
H2'
YYG
N
-1.264
1.955
-3.231
48
N
H
2HO*
0
9.470
107.523
276.886
0
N
HO2'
YYG
N
-3.544
1.616
-3.428
49
N
H
H1*
0
7.660
105.964
276.561
1
N
H1'
YYG
N
-1.410
-1.063
-3.303
50
N
H
H8
0
6.697
104.987
273.036
1
N
H8
YYG
N
1.780
1.025
-3.039
51
N
H
1H3
0
9.097
105.783
277.250
1
N
H31
YYG
N
-3.287
-1.797
-0.596
52
N
H
2H3
0
9.384
104.370
278.327
1
N
H32
YYG
N
-2.943
-0.462
-1.722
53
N
H
3H3
0
10.723
105.033
277.446
1
N
H33
YYG
N
-2.176
-2.050
-1.963
54
N
H
1H10
0
12.723
99.186
277.777
0
N
H101
YYG
N
-2.417
-3.294
4.344
55
N
H
2H10
0
13.321
100.821
278.208
0
N
H102
YYG
N
-2.410
-1.681
5.098
56
N
H
3H10
0
11.981
100.152
279.094
0
N
H103
YYG
N
-3.746
-2.155
4.022
57
N
H
1H13
0
11.320
99.369
274.299
0
N
H131
YYG
N
1.190
-0.915
4.018
58
N
H
2H13
0
12.034
98.772
275.692
0
N
H132
YYG
N
-0.067
-1.676
5.021
59
N
H
1H14
0
9.112
99.015
276.267
0
N
H141
YYG
N
-1.253
0.495
5.182
60
N
H
2H14
0
9.253
98.300
274.736
0
N
H142
YYG
N
0.005
1.256
4.179
61
N
H
H15
0
11.312
97.086
276.378
1
N
H15
YYG
N
1.714
0.670
5.877
62
N
H
1H19
0
11.207
95.993
280.339
0
N
H191
YYG
N
-1.763
3.311
8.985
63
N
H
2H19
0
11.615
97.403
279.206
0
N
H192
YYG
N
-0.075
3.829
8.760
64
N
H
3H19
0
10.205
97.537
280.113
0
N
H193
YYG
N
-1.272
4.112
7.473
65
N
H
HN20
0
10.125
95.263
275.085
0
N
HN20
YYG
N
-0.491
-0.774
7.165
66
N
H
1H24
0
6.505
93.612
273.977
0
N
H241
YYG
N
1.754
-2.944
10.444
67
N
H
2H24
0
7.395
93.702
275.595
0
N
H242
YYG
N
2.991
-2.537
9.230
68
N
H
3H24
0
6.108
94.768
275.365
0
N
H243
YYG
N
2.460
-1.311
10.406
69
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
Y
25
N
sing
Y
26
N
sing
Y
27
N
doub
N
28
N
sing
Y
29
N
sing
N
30
N
sing
Y
31
N
doub
N
32
N
doub
N
33
N
sing
Y
34
N
sing
Y
35
N
sing
Y
36
N
doub
N
37
N
sing
Y
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
Y
48
N
doub
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
doub
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
doub
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
EBI
RCSB
PDBE
O=C(OC)C(NC(=O)OC)CCc3c(nc4N(c1c(ncn1C2OC(C(O)C2O)COP(=O)(O)O)C(=O)n34)C)C
COC(=O)N[C@@H](CCc1n2C(=O)c3ncn([C@@H]4O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]4O)c3N(C)c2nc1C)C(=O)OC
COC(=O)N[CH](CCc1n2C(=O)c3ncn([CH]4O[CH](CO[P](O)(O)=O)[CH](O)[CH]4O)c3N(C)c2nc1C)C(=O)OC
Cc1c(n2c(n1)N(c3c(ncn3[C@H]4[C@@H]([C@@H]([C@H](O4)COP(=O)(O)O)O)O)C2=O)C)CC[C@@H](C(=O)OC)NC(=O)OC
Cc1c(n2c(n1)N(c3c(ncn3C4C(C(C(O4)COP(=O)(O)O)O)O)C2=O)C)CCC(C(=O)OC)NC(=O)OC
InChI=1S/C21H29N6O12P/c1-9-11(6-5-10(19(31)36-3)24-21(32)37-4)27-17(30)13-16(25(2)20(27)23-9)26(8-22-13)18-15(29)14(28)12(39-18)7-38-40(33,34)35/h8,10,12,14-15,18,28-29H,5-7H2,1-4H3,(H,24,32)(H2,33,34,35)/t10-,12+,14+,15+,18+/m0/s1
WOMRPCAFQVCGCI-QHOAOGIMSA-N
7-{(3S)-4-methoxy-3-[(methoxycarbonyl)amino]-4-oxobutyl}-4,6-dimethyl-3-(5-O-phosphono-beta-D-ribofuranosyl)-3,4-dihydro-9H-imidazo[1,2-a]purin-9-one
methyl (2S)-4-[3-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(phosphonooxymethyl)oxolan-2-yl]-4,6-dimethyl-9-oxo-imidazo[3,2-a]purin-7-yl]-2-(methoxycarbonylamino)butanoate