PDB Chemical Component YVQ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for YVQ

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
CAV	CAF	1.384	1.394
CAV	CAU	1.381	1.406
CAV	CAR	1.378	1.472
CAF	CAB	1.384	1.367
CAF	HAF	1.080	1.080
CAB	CAA	1.385	1.388
CAB	HAB	1.080	1.080
CAA	CAE	1.386	1.378
CAA	HAA	1.080	1.081
CAE	CAU	1.385	1.391
CAE	HAE	1.081	1.080
CAU	NAO	1.329	1.378
NAO	CAI	1.333	1.368
CAI	CAR	1.326	1.358
CAI	HAI	1.080	1.080
CAR	CAS	1.387	1.477
CAS	CAD	1.323	1.379
CAS	NAW	1.391	1.368
CAD	NAM	1.330	1.329
CAD	HAD	1.080	1.081
NAM	CAT	1.326	1.325
CAT	CAG	1.384	1.408
CAT	NAW	1.380	1.377
CAG	NAL	1.317	1.311
CAG	HAG	1.080	1.080
NAL	CAQ	1.339	1.342
NAW	CAJ	1.395	1.367
CAJ	CAQ	1.392	1.361
CAJ	HAJ	1.080	1.080
CAQ	CAP	1.390	1.485
CAP	CAC	1.321	1.364
CAP	CAH	1.324	1.409
CAC	NAK	1.327	1.349
CAC	HAC	1.080	1.081
CAH	NAN	1.329	1.306
CAH	HAH	1.080	1.080
NAN	NAK	1.230	1.399
NAK	HAK	1.000	0.970
NAO	H12	1.000	0.970

Bond Angles for YVQ

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
CAF	CAV	CAU	120.7	120.0
CAF	CAV	CAR	133.3	133.9
CAV	CAF	CAB	119.4	119.8
CAV	CAF	HAF	120.3	120.1
CAU	CAV	CAR	106.0	106.1
CAV	CAU	CAE	119.9	119.3
CAV	CAU	NAO	107.6	107.4
CAV	CAR	CAI	108.0	106.7
CAV	CAR	CAS	122.1	126.7
CAB	CAF	HAF	120.3	120.1
CAF	CAB	CAA	120.2	120.5
CAF	CAB	HAB	119.9	119.8
CAA	CAB	HAB	119.9	119.8
CAB	CAA	CAE	120.2	120.6
CAB	CAA	HAA	119.9	119.7
CAE	CAA	HAA	119.9	119.7
CAA	CAE	CAU	119.7	119.8
CAA	CAE	HAE	120.2	120.1
CAU	CAE	HAE	120.2	120.1
CAE	CAU	NAO	132.5	133.3
CAU	NAO	CAI	109.3	110.2
CAU	NAO	H12	125.4	124.9
NAO	CAI	CAR	109.0	109.7
NAO	CAI	HAI	125.5	125.2
CAI	NAO	H12	125.3	124.9
CAR	CAI	HAI	125.5	125.1
CAI	CAR	CAS	129.7	126.7
CAR	CAS	CAD	127.2	126.7
CAR	CAS	NAW	124.9	126.7
CAD	CAS	NAW	107.8	106.7
CAS	CAD	NAM	109.2	108.4
CAS	CAD	HAD	125.4	125.8
CAS	NAW	CAT	105.6	107.1
CAS	NAW	CAJ	135.4	133.6
NAM	CAD	HAD	125.4	125.8
CAD	NAM	CAT	109.5	109.5
NAM	CAT	CAG	132.5	132.8
NAM	CAT	NAW	107.8	108.3
CAG	CAT	NAW	119.7	118.9
CAT	CAG	NAL	120.6	119.9
CAT	CAG	HAG	119.7	120.1
CAT	NAW	CAJ	118.9	119.3
NAL	CAG	HAG	119.7	120.0
CAG	NAL	CAQ	121.9	121.3
NAL	CAQ	CAJ	120.4	121.0
NAL	CAQ	CAP	118.6	119.5
NAW	CAJ	CAQ	118.6	119.6
NAW	CAJ	HAJ	120.7	120.2
CAQ	CAJ	HAJ	120.7	120.2
CAJ	CAQ	CAP	121.0	119.5
CAQ	CAP	CAC	126.2	126.2
CAQ	CAP	CAH	127.9	126.2
CAC	CAP	CAH	105.9	107.5
CAP	CAC	NAK	107.6	107.6
CAP	CAC	HAC	126.2	126.2
CAP	CAH	NAN	107.7	108.1
CAP	CAH	HAH	126.2	125.9
NAK	CAC	HAC	126.2	126.2
CAC	NAK	NAN	109.6	108.2
CAC	NAK	HAK	125.2	125.9
NAN	CAH	HAH	126.1	126.0
CAH	NAN	NAK	109.2	108.6
NAN	NAK	HAK	125.2	125.9

Torsion Angles for YVQ

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
CAU	CAV	CAF	CAR	176.8	180.4
CAF	CAV	CAU	CAE	1.0	0.0
CAF	CAV	CAU	NAO	180.5	179.9
CAF	CAV	CAR	CAI	179.6	180.0
CAF	CAV	CAR	CAS	355.7	0.0
CAB	CAF	CAV	HAF	180.0	180.1
CAV	CAF	CAB	CAA	0.6	360.0
CAV	CAF	CAB	HAB	180.6	180.0
CAF	CAV	CAU	CAR	182.5	179.7
CAU	CAV	CAF	CAB	358.9	0.0
CAU	CAV	CAF	HAF	178.9	179.9
CAU	CAV	CAR	CAI	2.4	359.7
CAU	CAV	CAR	CAS	178.6	179.7
CAA	CAE	CAU	CAV	359.5	360.0
CAV	CAU	CAE	HAE	179.5	180.1
CAE	CAU	CAV	NAO	180.5	180.1
CAV	CAU	NAO	CAI	0.7	360.0
CAV	CAU	NAO	H12	180.7	179.9
CAF	CAV	CAR	CAU	177.1	180.3
CAR	CAV	CAF	CAB	182.2	179.7
CAR	CAV	CAF	HAF	2.2	359.6
CAR	CAV	CAU	CAE	178.6	180.3
CAR	CAV	CAU	NAO	358.1	0.2
NAO	CAI	CAR	CAV	357.9	0.3
CAV	CAR	CAI	HAI	177.9	180.2
CAI	CAR	CAV	CAS	183.8	180.0
CAV	CAR	CAS	CAD	351.5	0.1
CAV	CAR	CAS	NAW	175.8	179.7
CAB	CAF	CAV	CAU	358.9	0.0
CAB	CAF	CAV	CAR	182.2	179.7
CAV	CAF	CAB	HAF	180.0	179.9
CAA	CAB	CAF	HAB	180.0	180.0
CAF	CAB	CAA	CAE	360.0	0.0
CAF	CAB	CAA	HAA	180.0	180.0
HAF	CAF	CAV	CAU	178.9	179.9
HAF	CAF	CAV	CAR	2.2	359.6
CAV	CAF	HAF	CAB	180.0	180.1
HAF	CAF	CAB	CAA	180.6	180.1
HAF	CAF	CAB	HAB	0.6	0.1
CAA	CAB	CAF	HAF	180.6	180.1
CAF	CAB	CAA	HAB	180.0	180.0
CAE	CAA	CAB	HAA	180.0	180.0
CAB	CAA	CAE	CAU	360.0	0.0
CAB	CAA	CAE	HAE	180.0	179.9
HAB	CAB	CAF	HAF	0.6	0.1
CAF	CAB	HAB	CAA	180.0	180.0
HAB	CAB	CAA	CAE	180.0	180.0
HAB	CAB	CAA	HAA	0.0	0.0
CAV	CAU	CAE	CAA	359.5	360.0
CAE	CAA	CAB	HAB	180.0	180.0
CAB	CAA	CAE	HAA	180.0	180.0
CAU	CAE	CAA	HAE	180.0	180.1
CAA	CAE	CAU	NAO	180.2	180.0
HAA	CAA	CAB	HAB	0.0	0.0
CAB	CAA	HAA	CAE	180.0	180.0
HAA	CAA	CAE	CAU	179.9	180.0
HAA	CAA	CAE	HAE	359.9	359.9
CAE	CAU	CAV	CAR	178.6	180.3
CAV	CAU	CAE	NAO	179.3	179.9
CAU	CAE	CAA	HAA	179.9	180.0
CAA	CAE	CAU	HAE	180.0	179.9
CAE	CAU	NAO	CAI	180.1	179.9
CAE	CAU	NAO	H12	0.1	359.9
HAE	CAE	CAA	HAA	359.9	359.9
CAA	CAE	HAE	CAU	180.0	180.1
HAE	CAE	CAU	NAO	0.2	0.1
NAO	CAU	CAV	CAR	358.1	0.2
CAV	CAU	NAO	CAE	180.6	180.1
NAO	CAU	CAE	HAE	0.2	0.1
CAU	NAO	CAI	CAR	0.8	359.8
CAU	NAO	CAI	HAI	180.9	179.9
CAI	NAO	CAU	H12	180.0	180.0
CAV	CAR	CAI	NAO	357.9	0.3
CAU	NAO	CAI	H12	180.0	180.0
CAR	CAI	NAO	HAI	180.0	179.9
NAO	CAI	CAR	CAS	182.1	180.3
CAV	CAR	CAI	CAS	175.8	180.0
NAO	CAI	CAR	HAI	180.0	180.1
CAR	CAI	NAO	H12	180.8	179.8
CAI	CAR	CAS	CAD	166.8	180.1
CAI	CAR	CAS	NAW	351.1	359.7
NAO	CAI	HAI	CAR	180.0	179.9
HAI	CAI	NAO	H12	0.9	360.0
HAI	CAI	CAR	CAS	2.1	0.2
CAV	CAR	CAS	CAI	184.7	180.0
CAS	CAR	CAI	HAI	2.1	0.2
CAD	CAS	CAR	NAW	175.7	180.4
CAR	CAS	CAD	NAM	181.9	179.9
CAR	CAS	CAD	HAD	1.9	360.0
CAR	CAS	NAW	CAT	178.3	179.9
CAR	CAS	NAW	CAJ	356.0	0.1
CAR	CAS	CAD	NAW	183.7	179.7
CAD	CAS	NAW	CAT	1.9	359.6
CAD	CAS	NAW	CAJ	179.6	179.8
NAM	CAD	CAS	HAD	180.0	180.0
CAS	CAD	NAM	CAT	1.0	0.0
CAR	CAS	NAW	CAD	176.4	180.3
NAW	CAS	CAD	NAM	358.2	0.3
NAW	CAS	CAD	HAD	178.2	180.3
NAM	CAT	NAW	CAS	358.7	0.5
CAG	CAT	NAW	CAS	179.1	180.2
CAT	NAW	CAS	CAJ	182.3	179.8
CAS	NAW	CAJ	CAQ	182.0	179.1
CAS	NAW	CAJ	HAJ	1.9	359.9
NAM	CAD	CAS	NAW	358.2	0.3
CAS	CAD	NAM	HAD	180.0	180.0
CAD	NAM	CAT	CAG	179.7	180.0
CAD	NAM	CAT	NAW	0.2	359.7
HAD	CAD	CAS	NAW	178.2	180.3
CAS	CAD	HAD	NAM	180.0	180.0
HAD	CAD	NAM	CAT	181.0	180.0
CAS	NAW	CAT	NAM	358.7	0.5
CAT	NAM	CAD	HAD	181.0	180.0
CAG	CAT	NAM	NAW	179.5	180.3
NAM	CAT	CAG	NAL	180.1	180.0
NAM	CAT	CAG	HAG	0.1	0.0
NAM	CAT	NAW	CAJ	180.6	180.3
CAS	NAW	CAT	CAG	179.1	180.2
NAM	CAT	CAG	NAW	180.5	179.7
CAG	CAT	NAW	CAJ	1.0	0.1
NAL	CAG	CAT	HAG	180.0	180.0
CAT	CAG	NAL	CAQ	359.4	360.0
CAS	NAW	CAT	CAJ	178.1	180.2
NAM	CAT	NAW	CAG	179.6	180.2
NAW	CAT	CAG	NAL	359.6	0.3
NAW	CAT	CAG	HAG	179.6	180.3
CAT	NAW	CAJ	CAQ	359.4	359.3
CAT	NAW	CAJ	HAJ	179.4	180.2
NAL	CAG	CAT	NAW	359.6	0.3
CAT	CAG	NAL	HAG	180.0	180.0
CAG	NAL	CAQ	CAJ	0.9	359.4
CAG	NAL	CAQ	CAP	179.5	180.1
HAG	CAG	CAT	NAW	179.6	180.3
CAT	CAG	HAG	NAL	180.0	180.0
HAG	CAG	NAL	CAQ	179.5	180.0
CAQ	NAL	CAG	HAG	179.5	180.0
NAW	CAJ	CAQ	NAL	359.7	1.0
NAL	CAQ	CAJ	HAJ	179.7	180.1
CAJ	CAQ	NAL	CAP	181.4	179.3
NAL	CAQ	CAP	CAC	357.1	359.9
NAL	CAQ	CAP	CAH	178.8	179.7
CAS	NAW	CAJ	CAT	182.6	179.8
NAL	CAQ	CAJ	NAW	359.7	1.0
CAQ	CAJ	NAW	HAJ	180.0	179.2
NAW	CAJ	CAQ	CAP	181.1	180.3
NAL	CAQ	CAJ	CAP	178.6	180.7
NAW	CAJ	CAQ	HAJ	180.0	180.8
CAJ	CAQ	CAP	CAC	175.7	180.6
CAJ	CAQ	CAP	CAH	357.4	0.4
NAW	CAJ	HAJ	CAQ	180.0	179.2
HAJ	CAJ	CAQ	CAP	1.1	359.5
NAL	CAQ	CAP	CAJ	181.4	179.3
CAP	CAQ	CAJ	HAJ	1.1	359.5
CAC	CAP	CAQ	CAH	178.3	180.2
CAQ	CAP	CAC	NAK	180.7	180.0
CAQ	CAP	CAC	HAC	0.7	360.0
CAQ	CAP	CAH	NAN	179.3	180.0
CAQ	CAP	CAH	HAH	359.3	0.0
CAQ	CAP	CAC	CAH	181.4	179.8
CAC	CAP	CAH	NAN	0.7	359.8
CAC	CAP	CAH	HAH	180.7	179.8
NAK	CAC	CAP	HAC	180.0	180.0
CAP	CAC	NAK	NAN	0.4	359.9
CAP	CAC	NAK	HAK	180.4	180.0
CAQ	CAP	CAH	CAC	178.6	180.2
CAH	CAP	CAC	NAK	359.3	0.2
CAH	CAP	CAC	HAC	179.3	180.2
NAN	CAH	CAP	HAH	180.0	180.0
CAP	CAH	NAN	NAK	359.5	0.2
NAK	CAC	CAP	CAH	359.3	0.2
CAP	CAC	NAK	HAC	180.0	180.0
CAH	NAN	NAK	CAC	0.1	360.0
NAN	NAK	CAC	HAK	180.0	179.9
HAC	CAC	CAP	CAH	179.3	180.2
CAP	CAC	HAC	NAK	180.0	180.0
HAC	CAC	NAK	NAN	180.4	179.9
HAC	CAC	NAK	HAK	0.4	360.0
CAP	CAH	NAN	HAH	180.0	180.0
CAC	NAK	NAN	CAH	0.1	360.0
CAH	NAN	NAK	HAK	180.0	179.9
CAP	CAH	HAH	NAN	180.0	179.9
HAH	CAH	NAN	NAK	179.5	180.1
NAN	NAK	CAC	HAC	180.4	179.9
CAC	NAK	NAN	HAK	180.0	180.1
NAK	NAN	CAH	HAH	179.5	180.1
HAK	NAK	CAC	HAC	0.4	360.0
CAC	NAK	HAK	NAN	180.0	179.9
CAU	NAO	H12	CAI	180.0	180.0
H12	NAO	CAI	CAR	180.8	179.8
H12	NAO	CAI	HAI	0.9	360.0