PDB Chemical Component YPP

Ideal Model

Chemical Description

Name Hydrolyzed piperacillin
Synonyms (2R,4S)-2-[(R)-carboxy{[(2R)-2-{[(4-ethyl-2,3-dioxopiperazin-1-yl)carbonyl]amino}-2-phenylacetyl]amino}methyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid
Formula C23 H29 N5 O8 S
Formal charge 0
Molecular weight 535.570 g/mol
Component type NON-POLYMER

Chemical features

Atom count 66
Chiral atom count 4
Chiral atoms CA CB CAG CAR
Bond count 68
Aromatic bond count 6

Chemical Identifiers

Systematic name (ACDLabs) (2R,4S)-2-[(R)-carboxy{[(2R)-2-{[(4-ethyl-2,3-dioxopiperazin-1-yl)carbonyl]amino}-2-phenylacetyl]amino}methyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid
Systematic name (OpenEye OEToolkits) (2R,4S)-2-[(1R)-1-[[(2R)-2-[(4-ethyl-2,3-dioxo-piperazin-1-yl)carbonylamino]-2-phenyl-ethanoyl]amino]-2-hydroxy-2-oxo-ethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid

Chemical Descriptors

Stereo SMILES (CACTVS) CCN1CCN(C(=O)N[C@@H](C(=O)N[C@@H]([C@@H]2N[C@@H](C(O)=O)C(C)(C)S2)C(O)=O)c3ccccc3)C(=O)C1=O
SMILES (CACTVS) CCN1CCN(C(=O)N[CH](C(=O)N[CH]([CH]2N[CH](C(O)=O)C(C)(C)S2)C(O)=O)c3ccccc3)C(=O)C1=O
Stereo SMILES (OpenEye) CCN1CCN(C(=O)C1=O)C(=O)N[C@H](c2ccccc2)C(=O)N[C@@H]([C@@H]3N[C@H](C(S3)(C)C)C(=O)O)C(=O)O
InChI descriptor InChI=1S/C23H29N5O8S/c1-4-27-10-11-28(19(31)18(27)30)22(36)25-13(12-8-6-5-7-9-12)16(29)24-14(20(32)33)17-26-15(21(34)35)23(2,3)37-17/h5-9,13-15,17,26H,4,10-11H2,1-3H3,(H,24,29)(H,25,36)(H,32,33)(H,34,35)/t13-,14+,15+,17-/m1/s1
InChIKey descriptor OKSUEATVFIVTFV-WBTNSWJXSA-N

Status Information

Last modified 2021-03-13
Created 2011-01-06
Release status REL
Model PDB code 3Q07
Processing site PDBJ