PDB Chemical Component YMZ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for YMZ

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
CAM	CAL	1.507	1.532
CAM	CAO	1.504	1.531
CAL	CAN	1.517	1.531
CAO	CAX	1.514	1.531
CAN	NAQ	1.463	1.468
CAX	NAQ	1.466	1.469
CAX	CAW	1.514	1.530
CAW	OAA	1.417	1.429
CAW	CAS	1.376	1.507
CAS	CAU	1.384	1.407
CAS	CAK	1.381	1.366
CAJ	CAU	1.394	1.404
CAJ	CAH	1.374	1.361
CAU	CAV	1.386	1.417
CAH	CAI	1.375	1.394
CAK	CAR	1.382	1.392
CAV	NAP	1.330	1.337
CAV	CAT	1.384	1.406
CAI	CAT	1.393	1.361
CAR	NAP	1.317	1.312
CAR	CAY	1.374	1.507
FAC	CAY	1.251	1.399
FAD	CAY	1.298	1.399
CAT	CAZ	1.377	1.507
CAY	FAB	1.224	1.399
CAZ	FAE	1.302	1.399
CAZ	FAF	1.218	1.399
CAZ	FAG	1.214	1.400
CAI	H1	1.080	1.079
CAH	H2	1.080	1.080
CAJ	H3	1.079	1.080
CAK	H4	1.080	1.080
CAW	H5	1.100	1.090
OAA	H6	0.950	0.967
CAX	H7	1.100	1.090
CAO	H8	1.100	1.090
CAO	H9	1.101	1.090
CAM	H10	1.100	1.090
CAM	H11	1.100	1.090
CAL	H12	1.100	1.090
CAL	H13	1.100	1.090
CAN	H14	1.100	1.090
CAN	H15	1.100	1.089
NAQ	H16	1.000	1.009

Bond Angles for YMZ

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
CAM	CAL	CAN	109.1	109.2
CAL	CAM	H10	109.6	109.5
CAL	CAM	H11	109.6	109.5
CAM	CAL	H12	109.6	109.5
CAM	CAL	H13	109.6	109.5
CAM	CAO	H8	109.3	109.5
CAM	CAO	H9	109.3	109.5
CAL	CAN	NAQ	110.2	109.5
CAN	CAL	H12	109.6	109.5
CAN	CAL	H13	109.6	109.5
CAL	CAN	H14	109.3	109.4
CAL	CAN	H15	109.3	109.5
CAO	CAX	NAQ	111.3	109.5
CAO	CAX	H7	108.7	109.4
CAX	NAQ	CAN	108.9	111.2
NAQ	CAN	H14	109.3	109.5
NAQ	CAN	H15	109.3	109.5
CAN	NAQ	H16	109.6	111.0
NAQ	CAX	H7	109.3	109.5
CAX	NAQ	H16	109.6	111.0
CAX	CAW	H5	110.0	109.5
OAA	CAW	H5	111.5	109.5
CAW	OAA	H6	109.5	114.0
CAS	CAK	H4	120.3	120.0
CAJ	CAU	CAV	120.5	119.6
CAU	CAJ	H3	119.3	120.1
CAJ	CAH	H2	121.2	119.6
CAU	CAV	NAP	120.8	119.8
CAH	CAI	H1	118.9	119.5
CAR	CAY	FAB	108.4	109.5
FAC	CAY	FAB	108.3	109.5
FAD	CAY	FAB	109.7	109.5
FAF	CAZ	FAG	108.9	109.4
H8	CAO	H9	109.5	109.5
H10	CAM	H11	109.5	109.6
H12	CAL	H13	109.5	109.6
H14	CAN	H15	109.5	109.5

Torsion Angles for YMZ

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
CAL	CAM	CAO	H8	176.4	297.7
CAL	CAM	CAO	H9	296.2	177.6
CAM	CAL	CAN	NAQ	61.6	59.2
CAN	CAL	CAM	H12	240.1	240.1
CAN	CAL	CAM	H13	119.9	119.9
CAM	CAL	CAN	H14	181.8	179.2
CAM	CAL	CAN	H15	301.5	299.1
H10	CAM	CAL	H11	239.8	120.1
H12	CAL	CAM	H13	239.9	239.8
CAM	CAO	CAX	NAQ	302.3	300.8
CAM	CAO	CAX	H7	62.7	60.8
H8	CAO	CAM	H9	240.2	120.1
CAN	CAL	CAM	H10	61.8	182.4
CAN	CAL	CAM	H11	181.9	62.3
CAM	CAL	CAN	H12	119.9	119.9
CAM	CAL	CAN	H13	240.0	240.0
CAX	NAQ	CAN	CAL	298.4	298.2
NAQ	CAN	CAL	H14	239.9	240.0
NAQ	CAN	CAL	H15	120.1	120.0
CAL	CAN	NAQ	H16	58.3	62.4
H12	CAL	CAN	H13	120.1	120.2
H14	CAN	CAL	H15	240.2	240.0
CAO	CAX	NAQ	CAN	59.7	61.7
NAQ	CAX	CAO	H7	239.6	240.0
CAO	CAX	NAQ	H16	299.8	297.6
CAO	CAX	CAW	H5	39.2	60.1
NAQ	CAN	CAL	H12	301.7	299.3
NAQ	CAN	CAL	H13	181.6	179.1
CAL	CAN	NAQ	H14	120.1	120.0
CAL	CAN	NAQ	H15	239.9	240.0
CAN	NAQ	CAX	H7	299.6	301.8
CAX	NAQ	CAN	H16	240.1	235.9
H14	CAN	NAQ	H15	119.8	120.0
CAL	CAN	NAQ	CAX	298.4	298.2
CAO	CAX	NAQ	H7	120.1	119.9
CAX	NAQ	CAN	H14	178.3	178.3
CAX	NAQ	CAN	H15	58.5	58.2
CAN	NAQ	CAX	H16	119.9	124.2
NAQ	CAX	CAW	H5	277.1	300.0
OAA	CAW	CAX	H5	238.5	240.0
CAX	CAW	OAA	H6	180.0	300.0
CAX	CAW	OAA	H5	120.7	120.0
CAW	CAS	CAK	H4	1.3	360.0
CAS	CAU	CAJ	H3	0.6	0.3
CAU	CAJ	CAH	H2	179.8	180.1
CAJ	CAU	CAV	NAP	179.7	180.1
CAJ	CAH	CAI	H1	180.8	180.0
CAV	CAU	CAJ	H3	179.7	180.0
FAC	CAY	CAR	FAB	118.5	120.0
FAD	CAY	CAR	FAB	240.3	240.0
CAR	CAY	FAC	FAB	241.4	240.0
FAD	CAY	FAC	FAB	120.1	120.0
CAR	CAY	FAD	FAB	118.9	120.0
FAC	CAY	FAD	FAB	240.8	239.9
H2	CAH	CAI	H1	0.9	359.9
H3	CAJ	CAU	CAV	179.7	180.0
H3	CAJ	CAH	H2	359.8	359.8
H5	CAW	OAA	H6	59.3	180.0
H6	OAA	CAW	H5	59.3	180.0
CAO	CAX	H7	NAQ	238.3	240.0
H7	CAX	NAQ	CAN	299.6	301.8
H7	CAX	NAQ	H16	179.7	177.6
H7	CAX	CAW	H5	156.3	180.0
CAM	CAO	H8	H9	119.7	239.9
H8	CAO	CAX	NAQ	182.2	60.8
H8	CAO	CAX	H7	302.6	180.8
CAM	CAO	H9	H8	240.3	120.1
H9	CAO	CAX	NAQ	62.4	180.9
H9	CAO	CAX	H7	182.8	300.8
H10	CAM	CAL	CAN	61.8	182.4
CAL	CAM	H10	H11	120.2	239.9
H10	CAM	CAL	H12	181.7	302.3
H10	CAM	CAL	H13	301.8	62.5
H10	CAM	CAO	H8	56.5	57.6
H10	CAM	CAO	H9	176.3	297.5
H11	CAM	CAL	CAN	181.9	62.3
CAL	CAM	H11	H10	239.8	120.1
H11	CAM	CAL	H12	301.8	182.2
H11	CAM	CAL	H13	62.0	302.4
H11	CAM	CAO	H8	296.4	177.8
H11	CAM	CAO	H9	56.1	57.7
CAM	CAL	H12	CAN	240.4	240.3
H12	CAL	CAM	H10	181.7	302.3
H12	CAL	CAM	H11	301.8	182.2
CAM	CAL	H12	H13	120.2	120.2
H12	CAL	CAN	NAQ	301.7	299.3
CAN	CAL	H12	H13	239.8	239.9
H12	CAL	CAN	H14	61.8	59.3
H12	CAL	CAN	H15	181.6	179.3
CAM	CAL	H13	CAN	119.6	119.8
H13	CAL	CAM	H10	301.8	62.5
H13	CAL	CAM	H11	62.0	302.4
CAM	CAL	H13	H12	239.8	239.9
H13	CAL	CAN	NAQ	181.6	179.1
CAN	CAL	H13	H12	120.2	120.1
H13	CAL	CAN	H14	301.7	299.1
H13	CAL	CAN	H15	61.5	59.1
CAL	CAN	H14	NAQ	239.3	240.0
H14	CAN	CAL	H12	61.8	59.3
H14	CAN	CAL	H13	301.7	299.1
CAL	CAN	H14	H15	119.6	120.0
NAQ	CAN	H14	H15	240.3	240.0
H14	CAN	NAQ	H16	298.2	302.4
CAL	CAN	H15	NAQ	120.7	120.1
H15	CAN	CAL	H12	181.6	179.3
H15	CAN	CAL	H13	61.5	59.1
CAL	CAN	H15	H14	240.4	240.1
NAQ	CAN	H15	H14	119.7	120.0
H15	CAN	NAQ	H16	178.4	182.4
CAX	NAQ	H16	CAN	119.5	124.3
H16	NAQ	CAN	H14	298.2	302.4
H16	NAQ	CAN	H15	178.4	182.4
H16	NAQ	CAX	H7	179.7	177.6