PDB Chemical Component YKN

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for YKN

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
F10	C9	1.328	1.399
C9	F11	1.326	1.399
C9	S12	1.871	1.810
C9	C8	1.492	1.506
S12	C13	1.707	1.762
C13	N15	1.347	1.326
C13	N20	1.342	1.326
N15	C16	1.346	1.322
C16	C17	1.520	1.507
C16	C18	1.409	1.387
C18	C19	1.402	1.386
C19	N20	1.352	1.323
C8	N7	1.349	1.299
C8	O14	1.337	1.342
N7	C6	1.364	1.361
C6	C5	1.393	1.396
C6	C1	1.368	1.403
C5	C4	1.390	1.377
C4	C3	1.389	1.387
C3	C2	1.362	1.379
C2	C1	1.360	1.387
C1	O14	1.304	1.351
C17	H171	1.100	1.089
C17	H172	1.100	1.091
C17	H173	1.100	1.090
C18	H18	1.080	1.080
C19	H19	1.080	1.080
C5	H5	1.080	1.080
C4	H4	1.080	1.080
C3	H3	1.080	1.080
C2	H2	1.080	1.080

Bond Angles for YKN

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
F10	C9	F11	99.9	109.4
F10	C9	S12	116.9	109.5
F10	C9	C8	101.6	109.5
F11	C9	S12	116.3	109.5
F11	C9	C8	104.7	109.5
S12	C9	C8	115.2	109.5
C9	S12	C13	104.3	100.0
C9	C8	N7	123.9	124.9
C9	C8	O14	123.2	124.8
S12	C13	N15	117.6	119.2
S12	C13	N20	122.7	119.2
N15	C13	N20	119.7	121.6
C13	N15	C16	123.5	120.7
C13	N20	C19	119.5	120.7
N15	C16	C17	116.2	120.4
N15	C16	C18	118.5	119.2
C17	C16	C18	125.2	120.4
C16	C17	H171	109.5	109.5
C16	C17	H172	109.4	109.4
C16	C17	H173	109.4	109.5
C16	C18	C19	116.3	118.5
C16	C18	H18	121.8	120.7
C18	C19	N20	122.5	119.2
C19	C18	H18	121.9	120.7
C18	C19	H19	118.8	120.4
N20	C19	H19	118.8	120.4
N7	C8	O14	112.8	110.3
C8	N7	C6	105.2	108.9
C8	O14	C1	103.9	108.2
N7	C6	C5	134.2	133.8
N7	C6	C1	105.4	106.5
C5	C6	C1	120.4	119.7
C6	C5	C4	118.5	119.7
C6	C5	H5	120.7	120.1
C6	C1	C2	122.7	119.8
C6	C1	O14	112.8	106.2
C5	C4	C3	117.6	120.4
C4	C5	H5	120.7	120.2
C5	C4	H4	121.2	119.8
C4	C3	C2	124.6	120.5
C3	C4	H4	121.2	119.8
C4	C3	H3	117.7	119.8
C3	C2	C1	116.1	119.9
C2	C3	H3	117.7	119.8
C3	C2	H2	122.0	120.1
C2	C1	O14	124.5	134.0
C1	C2	H2	121.9	120.1
H171	C17	H172	109.5	109.4
H171	C17	H173	109.5	109.5
H172	C17	H173	109.5	109.5

Torsion Angles for YKN

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
F11	C9	F10	S12	233.6	240.0
F11	C9	F10	C8	107.3	120.0
S12	C9	F10	C8	233.7	239.9
F10	C9	S12	C13	58.0	300.0
F10	C9	C8	N7	7.4	59.9
F10	C9	C8	O14	183.2	239.7
F10	C9	F11	S12	126.8	120.0
F10	C9	F11	C8	255.2	240.0
S12	C9	F11	C8	128.4	120.0
F11	C9	S12	C13	175.7	60.0
F11	C9	C8	N7	263.9	300.0
F11	C9	C8	O14	79.6	119.7
F10	C9	S12	F11	242.3	240.0
F10	C9	S12	C8	119.2	120.0
F11	C9	S12	C8	237.0	240.0
S12	C9	C8	N7	134.8	180.0
S12	C9	C8	O14	310.6	359.7
C9	S12	C13	N15	357.7	180.0
C9	S12	C13	N20	179.0	359.8
F10	C9	C8	F11	103.6	119.9
F10	C9	C8	S12	232.6	239.9
F11	C9	C8	S12	129.0	120.0
C8	C9	S12	C13	298.8	180.0
N7	C8	C9	O14	184.3	180.3
C9	C8	N7	C6	178.2	180.0
C9	C8	O14	C1	181.8	179.9
C13	S12	C9	C8	298.8	180.0
N15	C13	S12	N20	178.7	180.3
S12	C13	N15	C16	181.9	180.0
S12	C13	N20	C19	177.6	179.8
S12	C13	N15	N20	181.2	179.7
N15	C13	N20	C19	359.0	359.5
C13	N15	C16	C17	180.8	180.0
C13	N15	C16	C18	360.0	0.0
S12	C13	N20	N15	178.7	180.3
N20	C13	N15	C16	0.7	0.3
C18	C19	N20	C13	0.8	0.4
C13	N20	C19	H19	180.8	180.3
C16	N15	C13	N20	0.7	0.3
C17	C16	N15	C18	180.9	180.0
N15	C16	C17	H171	360.0	90.1
N15	C16	C17	H172	120.0	210.0
N15	C16	C17	H173	240.0	330.0
N15	C16	C18	C19	359.8	359.9
N15	C16	C18	H18	179.7	180.0
N15	C16	C17	C18	179.1	180.0
C17	C16	C18	C19	178.8	180.0
C17	C16	C18	H18	358.8	0.0
H171	C17	C16	H172	240.0	240.1
H171	C17	C16	H173	120.0	120.1
H172	C17	C16	H173	240.0	240.0
N15	C16	C18	C17	180.9	180.0
C18	C16	C17	H171	180.9	270.1
C18	C16	C17	H172	300.9	30.0
C18	C16	C17	H173	60.9	149.9
C16	C18	C19	N20	359.8	359.8
C19	C18	C16	H18	180.0	179.9
C16	C18	C19	H19	179.9	180.0
C13	N20	C19	C18	0.8	0.4
C16	C18	C19	H18	180.0	180.1
N20	C19	C18	H19	180.0	179.9
N20	C19	C18	H18	179.9	179.8
C18	C19	N20	H19	180.0	180.1
C9	C8	N7	O14	176.1	179.8
N7	C8	O14	C1	357.9	359.6
C8	N7	C6	C5	177.9	180.1
C8	N7	C6	C1	358.8	-0.0
C9	C8	O14	N7	183.8	180.2
O14	C8	N7	C6	2.1	0.2
C6	C1	O14	C8	1.2	0.4
C2	C1	O14	C8	180.8	180.1
C6	N7	C8	O14	2.1	0.2
C5	C6	N7	C1	179.1	180.1
N7	C6	C5	C4	182.1	179.9
N7	C6	C5	H5	2.1	359.9
N7	C6	C1	C2	180.4	180.0
N7	C6	C1	O14	0.0	359.8
N7	C6	C5	C1	181.0	179.9
C5	C6	C1	C2	1.1	360.0
C5	C6	C1	O14	180.7	179.7
C6	C5	C4	C3	357.7	0.0
C4	C5	C6	H5	180.0	180.0
C6	C5	C4	H4	177.6	180.0
C8	O14	C1	C6	1.2	0.4
N7	C6	C1	C5	179.3	180.0
C1	C6	C5	C4	1.1	360.0
C1	C6	C5	H5	181.1	180.0
C3	C2	C1	C6	358.1	0.0
C2	C1	C6	O14	180.4	180.2
C6	C1	C2	H2	178.1	180.1
C4	C5	C6	C1	1.1	360.0
C6	C5	C4	H5	180.0	180.0
C5	C4	C3	C2	1.6	360.0
C3	C4	C5	H4	180.0	180.1
C5	C4	C3	H3	181.6	180.0
C3	C4	C5	H5	177.7	180.0
C5	C4	C3	H4	180.0	179.9
C4	C3	C2	C1	0.5	360.0
C2	C3	C4	H3	180.0	180.0
C4	C3	C2	H2	180.5	180.0
C6	C1	C2	C3	358.1	0.0
C2	C3	C4	H4	181.6	180.0
C4	C3	C2	H3	180.0	180.0
C3	C2	C1	O14	178.5	180.3
C1	C2	C3	H2	180.0	180.0
C8	O14	C1	C2	180.8	180.1
C6	C1	C2	O14	179.6	179.7
C1	C2	C3	H3	180.5	180.0
C3	C2	C1	H2	180.0	180.0
C6	C1	O14	C2	180.4	180.3
O14	C1	C2	H2	358.5	0.4
H171	C17	C16	C18	180.9	270.1
C16	C17	H171	H172	120.0	119.9
C16	C17	H171	H173	240.0	239.9
H172	C17	H171	H173	120.0	120.0
H172	C17	C16	C18	300.9	30.0
C16	C17	H172	H171	240.0	240.0
C16	C17	H172	H173	120.0	120.0
H171	C17	H172	H173	240.0	240.0
H173	C17	C16	C18	60.9	149.9
C16	C17	H173	H171	120.0	120.1
C16	C17	H173	H172	240.0	240.0
H171	C17	H173	H172	120.1	119.9
C16	C18	H18	C19	180.0	179.9
H18	C18	C19	N20	179.9	179.8
H18	C18	C19	H19	359.9	359.9
C18	C19	H19	N20	180.0	179.9
H19	C19	C18	H18	359.9	359.9
H5	C5	C6	C1	181.1	180.0
C6	C5	H5	C4	180.0	180.0
H5	C5	C4	C3	177.7	180.0
H5	C5	C4	H4	357.6	360.0
C5	C4	H4	C3	180.0	180.1
H4	C4	C5	H5	357.6	360.0
H4	C4	C3	C2	181.6	180.0
H4	C4	C3	H3	1.6	0.0
C4	C3	H3	C2	180.0	180.0
H3	C3	C4	H4	1.6	0.0
H3	C3	C2	C1	180.5	180.0
H3	C3	C2	H2	0.6	360.0
C3	C2	H2	C1	180.0	180.0
H2	C2	C3	H3	0.6	360.0
H2	C2	C1	O14	358.5	0.4