PDB Chemical Component YE7
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for YE7
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
CAK |
CAJ |
1.329 |
1.375 |
CAK |
NAM |
1.330 |
1.371 |
CAK |
HAK |
1.080 |
1.082 |
NAM |
CAG |
1.400 |
1.387 |
NAM |
CAH |
1.400 |
1.391 |
CAH |
CAI |
1.390 |
1.345 |
CAH |
HAH |
1.080 |
1.084 |
CAI |
CAE |
1.392 |
1.480 |
CAI |
HAI |
1.081 |
1.083 |
CAE |
CAD |
1.392 |
1.418 |
CAE |
CAF |
1.390 |
1.397 |
CAF |
CAA |
1.390 |
1.396 |
CAF |
HAF |
1.080 |
1.088 |
CAA |
CAB |
1.392 |
1.396 |
CAA |
HAA |
1.080 |
1.087 |
CAB |
CAC |
1.390 |
1.396 |
CAB |
HAB |
1.080 |
1.087 |
CAC |
CAD |
1.392 |
1.396 |
CAC |
HAC |
1.080 |
1.087 |
CAD |
CAG |
1.390 |
1.464 |
CAG |
NAN |
1.330 |
1.317 |
NAN |
CAJ |
1.331 |
1.372 |
CAJ |
CAL |
1.528 |
1.431 |
CAL |
OAQ |
1.229 |
1.255 |
CAL |
NAO |
1.330 |
1.408 |
NAO |
NAP |
1.361 |
1.383 |
NAO |
HNAO |
1.000 |
1.015 |
NAP |
HAP1 |
1.000 |
1.019 |
NAP |
HAP2 |
1.000 |
1.020 |
Bond Angles for YE7
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
NAM |
CAK |
CAJ |
107.2 |
105.2 |
CAJ |
CAK |
HAK |
126.4 |
132.6 |
CAK |
CAJ |
NAN |
110.9 |
111.3 |
CAK |
CAJ |
CAL |
125.2 |
126.2 |
NAM |
CAK |
HAK |
126.4 |
122.2 |
CAK |
NAM |
CAG |
107.3 |
106.9 |
CAK |
NAM |
CAH |
132.8 |
130.1 |
CAH |
NAM |
CAG |
119.9 |
123.0 |
NAM |
CAG |
CAD |
120.0 |
118.8 |
NAM |
CAG |
NAN |
107.3 |
111.5 |
NAM |
CAH |
CAI |
119.7 |
120.8 |
NAM |
CAH |
HAH |
120.2 |
117.3 |
CAI |
CAH |
HAH |
120.1 |
121.9 |
CAH |
CAI |
CAE |
120.2 |
119.8 |
CAH |
CAI |
HAI |
119.9 |
121.2 |
CAE |
CAI |
HAI |
119.9 |
119.1 |
CAI |
CAE |
CAD |
120.3 |
119.8 |
CAI |
CAE |
CAF |
119.9 |
120.7 |
CAF |
CAE |
CAD |
119.8 |
119.5 |
CAE |
CAD |
CAC |
120.0 |
120.2 |
CAE |
CAD |
CAG |
119.9 |
117.8 |
CAE |
CAF |
CAA |
120.2 |
119.9 |
CAE |
CAF |
HAF |
119.9 |
120.9 |
CAA |
CAF |
HAF |
119.9 |
119.1 |
CAF |
CAA |
CAB |
119.9 |
120.4 |
CAF |
CAA |
HAA |
120.0 |
119.8 |
CAB |
CAA |
HAA |
120.1 |
119.8 |
CAA |
CAB |
CAC |
120.0 |
120.3 |
CAA |
CAB |
HAB |
120.0 |
119.8 |
CAC |
CAB |
HAB |
120.0 |
119.8 |
CAB |
CAC |
CAD |
120.1 |
119.7 |
CAB |
CAC |
HAC |
120.0 |
119.2 |
CAD |
CAC |
HAC |
119.9 |
121.1 |
CAC |
CAD |
CAG |
120.1 |
122.1 |
CAD |
CAG |
NAN |
132.7 |
129.7 |
CAG |
NAN |
CAJ |
107.3 |
105.1 |
NAN |
CAJ |
CAL |
123.9 |
122.5 |
CAJ |
CAL |
OAQ |
120.1 |
123.6 |
CAJ |
CAL |
NAO |
115.9 |
117.0 |
OAQ |
CAL |
NAO |
124.0 |
119.4 |
CAL |
NAO |
NAP |
122.2 |
120.4 |
CAL |
NAO |
HNAO |
118.9 |
122.3 |
NAP |
NAO |
HNAO |
118.9 |
117.3 |
NAO |
NAP |
HAP1 |
109.5 |
106.8 |
NAO |
NAP |
HAP2 |
109.5 |
106.8 |
HAP1 |
NAP |
HAP2 |
109.4 |
106.0 |
Torsion Angles for YE7
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
NAM |
CAK |
CAJ |
HAK |
180.0 |
180.0 |
CAJ |
CAK |
NAM |
CAG |
0.1 |
0.0 |
CAJ |
CAK |
NAM |
CAH |
180.5 |
180.0 |
CAG |
NAN |
CAJ |
CAK |
0.2 |
360.0 |
NAN |
CAJ |
CAK |
CAL |
180.2 |
180.0 |
CAK |
CAJ |
CAL |
OAQ |
201.7 |
1.2 |
CAK |
CAJ |
CAL |
NAO |
23.6 |
180.0 |
CAJ |
CAK |
NAM |
HAK |
180.0 |
180.0 |
NAM |
CAK |
CAJ |
NAN |
359.8 |
360.0 |
NAM |
CAK |
CAJ |
CAL |
179.5 |
180.0 |
CAH |
NAM |
CAK |
CAG |
180.3 |
179.9 |
CAK |
NAM |
CAG |
CAD |
180.3 |
180.0 |
CAK |
NAM |
CAG |
NAN |
0.0 |
359.9 |
CAK |
NAM |
CAH |
CAI |
179.6 |
180.0 |
CAK |
NAM |
CAH |
HAH |
359.5 |
0.1 |
NAM |
CAK |
HAK |
CAJ |
180.0 |
180.1 |
HAK |
CAK |
CAJ |
NAN |
179.8 |
180.0 |
HAK |
CAK |
CAJ |
CAL |
359.5 |
0.1 |
HAK |
CAK |
NAM |
CAG |
180.1 |
180.0 |
HAK |
CAK |
NAM |
CAH |
0.5 |
359.9 |
CAG |
NAM |
CAK |
CAJ |
0.1 |
0.0 |
CAG |
NAM |
CAK |
HAK |
180.1 |
180.0 |
CAK |
NAM |
CAG |
CAH |
180.3 |
179.9 |
CAG |
NAM |
CAH |
CAI |
360.0 |
359.9 |
CAG |
NAM |
CAH |
HAH |
179.9 |
180.0 |
CAE |
CAD |
CAG |
NAM |
0.0 |
360.0 |
CAC |
CAD |
CAG |
NAM |
179.9 |
180.0 |
CAD |
CAG |
NAM |
NAN |
180.3 |
180.0 |
NAM |
CAG |
NAN |
CAJ |
359.9 |
0.1 |
CAH |
NAM |
CAK |
CAJ |
180.5 |
180.0 |
CAH |
NAM |
CAK |
HAK |
0.5 |
359.9 |
CAK |
NAM |
CAH |
CAG |
179.6 |
180.1 |
CAH |
NAM |
CAG |
CAD |
0.0 |
0.1 |
CAH |
NAM |
CAG |
NAN |
179.7 |
180.0 |
CAI |
CAH |
NAM |
HAH |
180.0 |
179.9 |
NAM |
CAH |
CAI |
CAE |
0.0 |
0.0 |
NAM |
CAH |
CAI |
HAI |
180.0 |
180.1 |
CAI |
CAH |
NAM |
CAG |
360.0 |
359.9 |
NAM |
CAH |
CAI |
HAH |
180.0 |
180.1 |
CAE |
CAI |
CAH |
HAI |
180.0 |
180.0 |
CAH |
CAI |
CAE |
CAD |
0.1 |
0.0 |
CAH |
CAI |
CAE |
CAF |
180.2 |
180.0 |
HAH |
CAH |
NAM |
CAG |
179.9 |
180.0 |
NAM |
CAH |
HAH |
CAI |
180.0 |
179.9 |
HAH |
CAH |
CAI |
CAE |
180.0 |
180.0 |
HAH |
CAH |
CAI |
HAI |
0.0 |
0.0 |
CAE |
CAI |
CAH |
HAH |
180.0 |
180.0 |
CAH |
CAI |
CAE |
HAI |
180.0 |
180.0 |
CAF |
CAE |
CAI |
CAD |
180.2 |
180.0 |
CAI |
CAE |
CAD |
CAC |
180.1 |
179.9 |
CAI |
CAE |
CAD |
CAG |
359.9 |
360.0 |
CAI |
CAE |
CAF |
CAA |
179.9 |
180.0 |
CAI |
CAE |
CAF |
HAF |
359.9 |
0.0 |
HAI |
CAI |
CAH |
HAH |
0.0 |
0.0 |
CAH |
CAI |
HAI |
CAE |
180.0 |
180.0 |
HAI |
CAI |
CAE |
CAD |
180.1 |
180.0 |
HAI |
CAI |
CAE |
CAF |
0.2 |
360.0 |
NAM |
CAG |
CAD |
CAE |
0.0 |
360.0 |
CAD |
CAE |
CAI |
HAI |
180.1 |
180.0 |
CAI |
CAE |
CAD |
CAF |
180.2 |
180.0 |
CAD |
CAE |
CAF |
CAA |
0.1 |
0.0 |
CAD |
CAE |
CAF |
HAF |
180.0 |
180.0 |
CAB |
CAC |
CAD |
CAE |
0.1 |
0.1 |
CAE |
CAD |
CAC |
HAC |
180.1 |
180.0 |
CAC |
CAD |
CAE |
CAG |
180.2 |
180.0 |
CAE |
CAD |
CAG |
NAN |
180.4 |
180.0 |
CAF |
CAE |
CAI |
HAI |
0.2 |
360.0 |
CAI |
CAE |
CAF |
CAD |
179.8 |
180.0 |
CAF |
CAE |
CAD |
CAC |
359.9 |
360.0 |
CAF |
CAE |
CAD |
CAG |
179.7 |
180.0 |
CAA |
CAF |
CAE |
HAF |
180.0 |
180.0 |
CAE |
CAF |
CAA |
CAB |
360.0 |
360.0 |
CAE |
CAF |
CAA |
HAA |
180.0 |
180.0 |
CAA |
CAF |
CAE |
CAD |
0.1 |
0.0 |
CAE |
CAF |
CAA |
HAF |
180.0 |
180.0 |
CAB |
CAA |
CAF |
HAA |
180.0 |
179.9 |
CAF |
CAA |
CAB |
CAC |
0.0 |
0.1 |
CAF |
CAA |
CAB |
HAB |
180.0 |
180.0 |
HAF |
CAF |
CAE |
CAD |
180.0 |
180.0 |
CAE |
CAF |
HAF |
CAA |
180.0 |
180.0 |
HAF |
CAF |
CAA |
CAB |
180.0 |
180.0 |
HAF |
CAF |
CAA |
HAA |
0.0 |
0.0 |
CAB |
CAA |
CAF |
HAF |
180.0 |
180.0 |
CAF |
CAA |
CAB |
HAA |
180.0 |
180.1 |
CAC |
CAB |
CAA |
HAB |
180.0 |
180.1 |
CAA |
CAB |
CAC |
CAD |
359.9 |
359.9 |
CAA |
CAB |
CAC |
HAC |
179.9 |
179.9 |
HAA |
CAA |
CAF |
HAF |
0.0 |
0.0 |
CAF |
CAA |
HAA |
CAB |
180.0 |
179.9 |
HAA |
CAA |
CAB |
CAC |
180.0 |
180.0 |
HAA |
CAA |
CAB |
HAB |
0.0 |
359.9 |
CAE |
CAD |
CAC |
CAB |
0.1 |
0.1 |
CAC |
CAB |
CAA |
HAA |
180.0 |
180.0 |
CAA |
CAB |
CAC |
HAB |
180.0 |
179.9 |
CAD |
CAC |
CAB |
HAC |
180.0 |
180.0 |
CAB |
CAC |
CAD |
CAG |
180.3 |
180.1 |
HAB |
CAB |
CAA |
HAA |
0.0 |
359.9 |
CAA |
CAB |
HAB |
CAC |
180.0 |
180.1 |
HAB |
CAB |
CAC |
CAD |
179.9 |
180.0 |
HAB |
CAB |
CAC |
HAC |
359.9 |
0.0 |
NAM |
CAG |
CAD |
CAC |
179.9 |
180.0 |
CAE |
CAD |
CAC |
CAG |
179.8 |
180.0 |
CAD |
CAC |
CAB |
HAB |
179.9 |
180.0 |
CAB |
CAC |
CAD |
HAC |
180.0 |
180.0 |
CAC |
CAD |
CAG |
NAN |
0.3 |
0.1 |
HAC |
CAC |
CAB |
HAB |
359.9 |
0.0 |
CAB |
CAC |
HAC |
CAD |
180.0 |
180.0 |
HAC |
CAC |
CAD |
CAG |
0.3 |
0.0 |
NAM |
CAG |
CAD |
NAN |
179.6 |
179.9 |
CAE |
CAD |
CAG |
CAC |
180.2 |
180.0 |
CAG |
CAD |
CAC |
HAC |
0.3 |
0.0 |
CAD |
CAG |
NAN |
CAJ |
179.5 |
180.0 |
CAK |
CAJ |
NAN |
CAG |
0.2 |
360.0 |
NAM |
CAG |
NAN |
CAD |
180.4 |
180.1 |
CAG |
NAN |
CAJ |
CAL |
180.5 |
179.9 |
NAN |
CAJ |
CAK |
HAK |
179.8 |
180.0 |
CAK |
CAJ |
NAN |
CAL |
179.8 |
180.0 |
NAN |
CAJ |
CAL |
OAQ |
21.4 |
181.3 |
NAN |
CAJ |
CAL |
NAO |
203.3 |
0.0 |
CAL |
CAJ |
CAK |
HAK |
359.5 |
0.1 |
CAK |
CAJ |
CAL |
NAN |
180.3 |
180.0 |
OAQ |
CAL |
CAJ |
NAO |
178.1 |
181.2 |
CAJ |
CAL |
NAO |
NAP |
243.0 |
181.2 |
CAJ |
CAL |
NAO |
HNAO |
63.0 |
358.7 |
CAJ |
CAL |
OAQ |
NAO |
182.1 |
178.7 |
OAQ |
CAL |
NAO |
NAP |
65.0 |
0.0 |
OAQ |
CAL |
NAO |
HNAO |
245.0 |
177.5 |
CAJ |
CAL |
NAO |
OAQ |
178.0 |
181.2 |
NAP |
NAO |
CAL |
HNAO |
180.0 |
182.6 |
CAL |
NAO |
NAP |
HAP1 |
157.7 |
120.5 |
CAL |
NAO |
NAP |
HAP2 |
277.7 |
233.6 |
CAL |
NAO |
NAP |
HNAO |
180.0 |
177.6 |
HAP1 |
NAP |
NAO |
HAP2 |
240.0 |
246.9 |
CAL |
NAO |
HNAO |
NAP |
180.0 |
182.5 |
HNAO |
NAO |
NAP |
HAP1 |
337.8 |
303.0 |
HNAO |
NAO |
NAP |
HAP2 |
97.7 |
56.1 |
HAP1 |
NAP |
NAO |
HNAO |
337.8 |
303.0 |
NAO |
NAP |
HAP1 |
HAP2 |
120.0 |
113.6 |
HAP2 |
NAP |
NAO |
HNAO |
97.7 |
56.1 |
NAO |
NAP |
HAP2 |
HAP1 |
240.0 |
246.3 |