PDB Chemical Component YCF

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for YCF

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
NAA	CAK	1.335	1.304
NAB	CAK	1.324	1.376
NAB	OBE	1.359	1.416
NAC	NAD	1.236	1.401
NAC	CAK	1.339	1.377
NAD	CAL	1.337	1.298
NAE	CAQ	1.356	1.399
NAE	CAT	1.348	1.348
NAF	CAT	1.349	1.347
NAF	CAU	1.358	1.399
NAG	NAH	1.245	1.401
NAG	CBA	1.353	1.299
NAH	CBC	1.343	1.381
NAI	CBC	1.322	1.300
NAI	OBF	1.367	1.416
NAJ	CBC	1.339	1.381
CAL	CAM	1.533	1.507
CAL	CAN	1.401	1.474
CAN	CAO	1.392	1.398
CAN	CAS	1.401	1.398
CAO	CAP	1.409	1.378
CAP	CAQ	1.401	1.390
CAQ	CAR	1.396	1.390
CAR	CAS	1.392	1.378
CAT	OBD	1.232	1.216
CAU	CAV	1.403	1.390
CAU	CAZ	1.404	1.390
CAV	CAW	1.407	1.377
CAW	CAX	1.411	1.398
CAX	CAY	1.401	1.397
CAX	CBA	1.408	1.474
CAY	CAZ	1.393	1.378
CBA	CBB	1.536	1.506
NAA	HNAA	1.000	0.970
NAB	HNAB	1.000	0.970
NAC	HNAC	1.000	0.970
NAE	HNAE	1.000	0.970
NAF	HNAF	0.999	0.970
NAH	HNAH	1.000	0.970
NAJ	HNAJ	1.000	0.970
NAJ	HNAD	1.000	0.970
CAM	HAM	1.100	1.089
CAM	HAMA	1.100	1.091
CAM	HAMB	1.100	1.090
CAO	HAO	1.080	1.080
CAP	HAP	1.080	1.079
CAR	HAR	1.080	1.080
CAS	HAS	1.080	1.080
CAV	HAV	1.081	1.080
CAW	HAW	1.080	1.080
CAY	HAY	1.080	1.080
CAZ	HAZ	1.080	1.080
CBB	HBB	1.100	1.089
CBB	HBBA	1.100	1.090
CBB	HBBB	1.100	1.091
OBE	HOBE	0.950	0.967
OBF	HOBF	0.950	0.967

Bond Angles for YCF

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
NAA	CAK	NAB	119.0	120.0
NAA	CAK	NAC	121.6	120.0
CAK	NAA	HNAA	112.0	120.0
CAK	NAB	OBE	119.2	120.0
NAB	CAK	NAC	119.4	120.0
CAK	NAB	HNAB	120.4	120.0
OBE	NAB	HNAB	120.4	120.0
NAB	OBE	HOBE	109.5	114.0
NAD	NAC	CAK	119.8	120.0
NAC	NAD	CAL	124.2	120.0
NAD	NAC	HNAC	120.1	120.0
CAK	NAC	HNAC	120.1	120.0
NAD	CAL	CAM	121.0	120.0
NAD	CAL	CAN	116.1	120.0
CAQ	NAE	CAT	129.5	120.0
NAE	CAQ	CAP	125.3	119.9
NAE	CAQ	CAR	115.9	119.9
CAQ	NAE	HNAE	115.3	120.0
NAE	CAT	NAF	113.3	120.0
NAE	CAT	OBD	123.5	120.0
CAT	NAE	HNAE	115.2	120.0
CAT	NAF	CAU	129.8	120.0
NAF	CAT	OBD	123.1	120.0
CAT	NAF	HNAF	115.1	120.0
NAF	CAU	CAV	125.7	119.9
NAF	CAU	CAZ	116.2	119.9
CAU	NAF	HNAF	115.1	120.0
NAH	NAG	CBA	124.6	120.0
NAG	NAH	CBC	118.8	120.0
NAG	NAH	HNAH	120.6	120.0
NAG	CBA	CAX	119.5	120.0
NAG	CBA	CBB	119.7	120.0
NAH	CBC	NAI	119.5	120.0
NAH	CBC	NAJ	121.9	120.0
CBC	NAH	HNAH	120.6	120.0
CBC	NAI	OBF	120.2	120.0
NAI	CBC	NAJ	118.5	120.0
NAI	OBF	HOBF	109.5	114.0
CBC	NAJ	HNAJ	120.0	120.0
CBC	NAJ	HNAD	120.0	120.0
CAM	CAL	CAN	122.7	120.0
CAL	CAM	HAM	109.5	109.5
CAL	CAM	HAMA	109.5	109.4
CAL	CAM	HAMB	109.5	109.5
CAL	CAN	CAO	122.5	120.1
CAL	CAN	CAS	118.2	120.1
CAO	CAN	CAS	119.2	119.8
CAN	CAO	CAP	119.7	119.9
CAN	CAO	HAO	120.1	120.0
CAN	CAS	CAR	121.2	119.9
CAN	CAS	HAS	119.4	120.1
CAO	CAP	CAQ	120.9	120.0
CAP	CAO	HAO	120.2	120.0
CAO	CAP	HAP	119.5	120.0
CAP	CAQ	CAR	118.9	120.2
CAQ	CAP	HAP	119.5	120.0
CAQ	CAR	CAS	120.2	120.1
CAQ	CAR	HAR	119.9	120.0
CAS	CAR	HAR	119.9	120.0
CAR	CAS	HAS	119.4	120.0
CAV	CAU	CAZ	118.0	120.2
CAU	CAV	CAW	120.5	120.1
CAU	CAV	HAV	119.8	119.9
CAU	CAZ	CAY	121.8	120.1
CAU	CAZ	HAZ	119.1	120.0
CAV	CAW	CAX	120.9	119.9
CAW	CAV	HAV	119.7	120.0
CAV	CAW	HAW	119.5	120.1
CAW	CAX	CAY	118.2	119.8
CAW	CAX	CBA	122.1	120.1
CAX	CAW	HAW	119.6	120.0
CAY	CAX	CBA	119.7	120.1
CAX	CAY	CAZ	120.5	119.9
CAX	CAY	HAY	119.8	120.0
CAX	CBA	CBB	120.6	120.0
CAZ	CAY	HAY	119.7	120.0
CAY	CAZ	HAZ	119.1	120.0
CBA	CBB	HBB	109.5	109.5
CBA	CBB	HBBA	109.4	109.5
CBA	CBB	HBBB	109.5	109.5
HNAJ	NAJ	HNAD	120.0	120.0
HAM	CAM	HAMA	109.5	109.4
HAM	CAM	HAMB	109.4	109.5
HAMA	CAM	HAMB	109.5	109.5
HBB	CBB	HBBA	109.5	109.5
HBB	CBB	HBBB	109.4	109.5
HBBA	CBB	HBBB	109.5	109.5

Torsion Angles for YCF

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
NAA	CAK	NAB	OBE	0.5	0.0
NAB	CAK	NAA	NAC	179.3	179.9
NAA	CAK	NAB	HNAB	180.5	180.0
NAD	NAC	CAK	NAA	359.4	360.0
NAA	CAK	NAC	HNAC	179.4	180.0
NAA	CAK	NAB	NAC	180.7	180.1
NAB	CAK	NAA	HNAA	179.3	180.0
OBE	NAB	CAK	HNAB	180.0	180.0
CAK	NAB	OBE	HOBE	180.0	180.0
NAD	NAC	CAK	NAB	180.1	180.0
NAB	CAK	NAC	HNAC	0.1	0.0
OBE	NAB	CAK	NAC	179.8	180.0
CAK	NAB	OBE	HNAB	180.0	180.0
NAA	CAK	NAC	NAD	359.4	360.0
NAB	CAK	NAC	NAD	180.1	180.0
CAK	NAC	NAD	HNAC	180.0	180.0
NAC	NAD	CAL	CAM	3.4	359.9
NAC	NAD	CAL	CAN	178.5	180.0
NAA	CAK	NAC	NAB	179.3	179.9
NAC	CAK	NAA	HNAA	360.0	0.0
NAC	CAK	NAB	OBE	179.8	180.0
NAC	CAK	NAB	HNAB	359.8	360.0
CAK	NAC	NAD	CAL	179.1	180.1
NAD	NAC	CAK	HNAC	180.0	180.0
CAL	NAD	NAC	CAK	179.1	180.1
CAL	NAD	NAC	HNAC	359.1	0.1
CAM	CAL	NAD	CAN	184.9	179.9
NAD	CAL	CAM	HAM	180.0	90.1
NAD	CAL	CAM	HAMA	300.0	210.0
NAD	CAL	CAM	HAMB	60.0	330.0
NAD	CAL	CAN	CAO	206.3	360.0
NAD	CAL	CAN	CAS	23.5	179.6
CAQ	NAE	CAT	NAF	182.4	184.6
CAQ	NAE	CAT	OBD	358.2	4.5
CAT	NAE	CAQ	HNAE	180.0	180.1
CAO	CAP	CAQ	NAE	180.2	180.0
CAP	CAQ	NAE	CAR	179.7	180.0
NAE	CAQ	CAP	HAP	0.2	0.0
NAE	CAQ	CAR	CAS	180.4	179.7
NAE	CAQ	CAR	HAR	0.4	0.0
CAT	NAE	CAQ	CAP	19.1	144.9
CAT	NAE	CAQ	CAR	199.4	324.9
CAQ	NAE	CAT	HNAE	180.0	179.9
NAE	CAT	NAF	CAU	190.2	184.6
NAF	CAT	NAE	OBD	184.2	180.1
NAE	CAT	NAF	HNAF	10.2	4.5
NAE	CAT	NAF	OBD	175.8	179.9
NAF	CAT	NAE	HNAE	2.4	4.7
CAT	NAF	CAU	CAV	352.9	144.9
CAT	NAF	CAU	CAZ	169.4	324.6
CAU	NAF	CAT	HNAF	180.0	180.1
CAU	NAF	CAT	OBD	14.4	4.7
CAT	NAF	CAU	HNAF	180.0	179.9
CAV	CAU	NAF	CAZ	183.4	180.3
NAF	CAU	CAV	CAW	178.0	180.0
NAF	CAU	CAV	HAV	358.0	0.0
NAF	CAU	CAZ	CAY	181.3	179.7
NAF	CAU	CAZ	HAZ	1.3	360.0
NAH	NAG	CBA	CAX	181.1	180.0
NAH	NAG	CBA	CBB	356.8	0.0
NAG	NAH	CBC	NAI	2.0	360.0
NAG	NAH	CBC	NAJ	178.9	180.0
CBC	NAH	NAG	HNAH	180.0	180.1
CBA	NAG	NAH	CBC	178.3	180.0
CBA	NAG	NAH	HNAH	358.4	359.9
CAW	CAX	CBA	NAG	152.4	360.0
CAY	CAX	CBA	NAG	332.9	180.0
CAX	CBA	NAG	CBB	184.3	180.0
NAG	CBA	CBB	HBB	180.0	90.0
NAG	CBA	CBB	HBBA	300.0	210.0
NAG	CBA	CBB	HBBB	60.0	330.0
CBC	NAH	NAG	CBA	178.3	180.0
NAG	NAH	CBC	HNAH	180.0	179.9
NAH	CBC	NAI	OBF	178.0	180.0
NAI	CBC	NAH	NAJ	183.1	180.0
NAH	CBC	NAJ	HNAJ	183.1	0.0
NAH	CBC	NAJ	HNAD	3.1	180.0
NAH	CBC	NAI	NAJ	177.0	180.0
NAI	CBC	NAH	HNAH	181.9	180.0
CBC	NAI	OBF	HOBF	180.0	179.9
NAI	CBC	NAJ	HNAJ	360.0	180.0
NAI	CBC	NAJ	HNAD	180.0	0.0
OBF	NAI	CBC	NAJ	0.9	360.0
NAH	CBC	NAJ	NAI	183.1	180.0
NAJ	CBC	NAH	HNAH	358.8	0.0
NAJ	CBC	NAI	OBF	0.9	360.0
HNAJ	NAJ	CBC	HNAD	180.0	180.0
NAD	CAL	CAM	CAN	174.8	180.1
CAM	CAL	CAN	CAO	21.3	180.1
CAM	CAL	CAN	CAS	198.6	359.7
HAM	CAM	CAL	HAMA	240.0	240.1
HAM	CAM	CAL	HAMB	120.0	120.1
HAMA	CAM	CAL	HAMB	240.0	240.0
NAD	CAL	CAN	CAM	185.0	179.9
CAN	CAL	CAM	HAM	5.2	270.0
CAN	CAL	CAM	HAMA	125.2	30.0
CAN	CAL	CAM	HAMB	245.3	150.0
CAO	CAN	CAL	CAS	182.7	180.4
CAL	CAN	CAO	CAP	178.6	180.0
CAL	CAN	CAO	HAO	358.7	359.9
CAL	CAN	CAS	CAR	181.9	179.7
CAL	CAN	CAS	HAS	1.8	0.1
CAL	CAN	CAO	CAS	177.3	179.6
CAO	CAN	CAS	CAR	359.2	359.4
CAO	CAN	CAS	HAS	179.2	179.7
CAN	CAO	CAP	CAQ	359.0	360.0
CAP	CAO	CAN	HAO	180.0	180.1
CAN	CAO	CAP	HAP	179.0	179.9
CAL	CAN	CAS	CAO	182.6	180.4
CAS	CAN	CAO	CAP	1.4	0.3
CAS	CAN	CAO	HAO	181.4	180.2
CAQ	CAR	CAS	CAN	359.7	0.6
CAN	CAS	CAR	HAR	179.7	180.3
CAR	CAS	CAN	HAS	180.0	179.7
NAE	CAQ	CAP	CAO	180.2	180.0
CAP	CAO	CAN	CAS	1.4	0.3
CAN	CAO	CAP	HAO	180.0	179.9
CAO	CAP	CAQ	CAR	360.0	360.0
CAQ	CAP	CAO	HAP	180.0	180.1
CAP	CAQ	NAE	CAT	19.1	144.9
NAE	CAQ	CAP	CAR	180.3	180.0
CAP	CAQ	NAE	HNAE	199.2	324.8
CAQ	CAP	CAO	HAO	179.0	180.1
CAO	CAP	CAQ	HAP	180.0	179.9
CAP	CAQ	CAR	CAS	0.7	359.7
CAP	CAQ	CAR	HAR	180.7	180.0
CAR	CAQ	NAE	CAT	199.4	324.9
NAE	CAQ	CAR	CAP	179.7	180.0
CAR	CAQ	NAE	HNAE	19.4	144.8
CAN	CAS	CAR	CAQ	359.7	0.6
CAR	CAQ	CAP	HAP	179.9	180.0
CAS	CAR	CAQ	HAR	180.0	179.7
CAQ	CAR	CAS	HAS	179.7	180.3
CAN	CAS	CAR	HAS	180.0	180.3
CAQ	CAR	CAS	HAR	180.0	180.3
NAE	CAT	OBD	NAF	184.7	180.1
OBD	CAT	NAE	HNAE	178.1	184.6
OBD	CAT	NAF	CAU	14.4	4.7
OBD	CAT	NAF	HNAF	194.4	184.6
NAF	CAU	CAV	CAZ	176.5	179.7
CAV	CAU	NAF	HNAF	172.8	324.9
CAV	CAU	CAZ	CAY	358.1	359.5
CAV	CAU	CAZ	HAZ	178.2	179.7
CAU	CAV	CAW	CAX	359.3	360.0
CAW	CAV	CAU	HAV	180.0	180.0
CAU	CAV	CAW	HAW	179.3	180.0
NAF	CAU	CAZ	CAV	183.2	180.3
CAZ	CAU	NAF	HNAF	349.4	144.7
CAZ	CAU	CAV	CAW	1.5	0.3
CAZ	CAU	CAV	HAV	181.5	180.3
CAX	CAY	CAZ	CAU	1.3	0.5
CAU	CAZ	CAY	HAY	181.3	180.3
CAY	CAZ	CAU	HAZ	180.0	179.8
CAW	CAV	CAU	CAZ	1.5	0.3
CAU	CAV	CAW	HAV	180.0	180.0
CAV	CAW	CAX	CAY	0.1	360.0
CAV	CAW	CAX	CBA	180.6	180.0
CAX	CAW	CAV	HAW	180.0	180.0
NAG	CBA	CAX	CAW	152.4	360.0
CAX	CAW	CAV	HAV	179.3	180.0
CAV	CAW	CAX	HAW	180.0	180.0
CAY	CAX	CAW	CBA	179.5	180.0
CAW	CAX	CAY	CAZ	359.6	359.8
CAW	CAX	CAY	HAY	179.6	180.0
CAW	CAX	CBA	CBB	336.7	180.0
NAG	CBA	CAX	CAY	332.9	180.0
CAU	CAZ	CAY	CAX	1.3	0.5
CAW	CAX	CAY	CBA	180.5	180.0
CAY	CAX	CAW	HAW	180.1	180.0
CAY	CAX	CBA	CBB	157.2	0.0
CAZ	CAY	CAX	HAY	180.0	179.8
CAX	CAY	CAZ	HAZ	181.3	180.3
NAG	CBA	CAX	CBB	175.7	180.0
CAW	CAX	CBA	CAY	179.5	180.0
CBA	CAX	CAW	HAW	0.6	360.0
CBA	CAX	CAY	CAZ	179.1	179.8
CBA	CAX	CAY	HAY	359.1	360.0
CAX	CBA	CBB	HBB	355.7	270.0
CAX	CBA	CBB	HBBA	115.7	30.0
CAX	CBA	CBB	HBBB	235.7	150.0
CAU	CAZ	CAY	HAZ	180.0	180.2
CAZ	CAY	CAX	CBA	179.1	179.8
CAX	CAY	CAZ	HAY	180.0	180.2
NAG	CBA	CBB	CAX	184.3	180.0
HBB	CBB	CBA	HBBA	240.0	240.0
HBB	CBB	CBA	HBBB	120.0	120.0
HBBA	CBB	CBA	HBBB	240.0	240.0
HNAA	NAA	CAK	NAB	179.3	180.0
HNAA	NAA	CAK	NAC	360.0	0.0
CAK	NAB	HNAB	OBE	180.0	180.0
HNAB	NAB	CAK	NAC	359.8	360.0
HNAB	NAB	OBE	HOBE	360.0	360.0
NAD	NAC	HNAC	CAK	180.0	180.0
HNAC	NAC	NAD	CAL	359.1	0.1
CAQ	NAE	HNAE	CAT	180.0	180.1
HNAE	NAE	CAQ	CAP	199.2	324.8
HNAE	NAE	CAQ	CAR	19.4	144.8
HNAE	NAE	CAT	NAF	2.4	4.7
HNAE	NAE	CAT	OBD	178.1	184.6
CAT	NAF	HNAF	CAU	180.0	180.1
HNAF	NAF	CAT	OBD	194.4	184.6
HNAF	NAF	CAU	CAV	172.8	324.9
HNAF	NAF	CAU	CAZ	349.4	144.7
HNAH	NAH	NAG	CBA	358.4	359.9
NAG	NAH	HNAH	CBC	180.0	180.1
HNAH	NAH	CBC	NAI	181.9	180.0
HNAH	NAH	CBC	NAJ	358.8	0.0
CBC	NAJ	HNAJ	HNAD	180.0	180.0
CBC	NAJ	HNAD	HNAJ	180.0	180.0
HAM	CAM	CAL	CAN	5.2	270.0
CAL	CAM	HAM	HAMA	120.0	119.9
CAL	CAM	HAM	HAMB	240.0	239.9
HAMA	CAM	HAM	HAMB	120.0	120.0
HAMA	CAM	CAL	CAN	125.2	30.0
CAL	CAM	HAMA	HAM	240.0	240.1
CAL	CAM	HAMA	HAMB	120.0	120.0
HAM	CAM	HAMA	HAMB	240.0	240.0
HAMB	CAM	CAL	CAN	245.3	150.0
CAL	CAM	HAMB	HAM	120.0	120.0
CAL	CAM	HAMB	HAMA	240.0	240.0
HAM	CAM	HAMB	HAMA	120.0	120.0
HAO	CAO	CAN	CAS	181.4	180.2
CAN	CAO	HAO	CAP	180.0	180.1
HAO	CAO	CAP	CAQ	179.0	180.1
HAO	CAO	CAP	HAP	359.0	0.0
CAO	CAP	HAP	CAQ	180.0	180.1
HAP	CAP	CAO	HAO	359.0	0.0
HAP	CAP	CAQ	CAR	179.9	180.0
CAQ	CAR	HAR	CAS	180.0	179.7
HAR	CAR	CAS	HAS	359.7	359.9
CAN	CAS	HAS	CAR	180.0	179.7
HAS	CAS	CAR	HAR	359.7	359.9
HAV	CAV	CAU	CAZ	181.5	180.3
CAU	CAV	HAV	CAW	180.0	180.0
HAV	CAV	CAW	CAX	179.3	180.0
HAV	CAV	CAW	HAW	359.3	0.0
CAV	CAW	HAW	CAX	180.0	180.0
HAW	CAW	CAV	HAV	359.3	0.0
HAW	CAW	CAX	CAY	180.1	180.0
HAW	CAW	CAX	CBA	0.6	360.0
HAY	CAY	CAX	CBA	359.1	360.0
CAX	CAY	HAY	CAZ	180.0	179.8
HAY	CAY	CAZ	HAZ	1.3	0.0
CAU	CAZ	HAZ	CAY	180.0	179.8
HAZ	CAZ	CAY	HAY	1.3	0.0
CBA	CBB	HBB	HBBA	120.0	120.0
CBA	CBB	HBB	HBBB	240.0	240.0
HBBA	CBB	HBB	HBBB	120.0	120.0
CBA	CBB	HBBA	HBB	240.0	240.0
CBA	CBB	HBBA	HBBB	120.0	120.0
HBB	CBB	HBBA	HBBB	240.0	240.0
CBA	CBB	HBBB	HBB	120.0	120.0
CBA	CBB	HBBB	HBBA	240.0	240.0
HBB	CBB	HBBB	HBBA	120.0	120.0
HOBE	OBE	NAB	HNAB	360.0	360.0