PDB Chemical Component Y96

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for Y96

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C10	C11	1.375	1.361
C10	C9	1.404	1.393
C11	C6	1.403	1.405
C9	C8	1.409	1.361
C6	C5	1.391	1.405
C6	C7	1.494	1.417
C8	C7	1.382	1.405
C5	C4	1.398	1.361
C7	C2	1.485	1.405
O	C	1.238	1.216
O23	N22	1.403	1.416
C21	N22	1.245	1.293
C21	C15	1.467	1.476
C4	C3	1.394	1.393
C14	C15	1.376	1.394
C14	C13	1.345	1.393
C15	C17	1.398	1.398
C	C13	1.470	1.479
C	N	1.350	1.348
C2	C3	1.391	1.361
C2	C1	1.502	1.507
C13	C19	1.471	1.396
C17	C18	1.392	1.380
C19	C18	1.401	1.381
C19	C20	1.500	1.507
N	C1	1.449	1.465
C1	C12	1.495	1.530
C20	H1	1.100	1.090
C20	H2	1.099	1.090
C20	H3	1.100	1.091
C18	H4	1.080	1.080
C17	H5	1.080	1.079
C21	H6	1.079	1.080
O23	H7	0.950	0.967
C14	H8	1.080	1.079
N	H9	1.000	0.970
C1	H10	1.101	1.090
C12	H11	1.100	1.090
C12	H12	1.100	1.090
C12	H13	1.100	1.090
C8	H14	1.080	1.080
C9	H15	1.080	1.081
C10	H16	1.080	1.080
C11	H17	1.080	1.080
C5	H18	1.081	1.080
C4	H19	1.080	1.080
C3	H20	1.080	1.080

Bond Angles for Y96

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C10	C11	C6	118.9	119.7
C11	C10	H16	120.0	119.5
C10	C11	H17	120.5	120.2
C10	C9	H15	118.3	119.5
C11	C6	C5	121.0	121.3
C6	C11	H17	120.5	120.1
C9	C8	H14	120.9	120.2
C6	C5	C4	122.2	119.7
C6	C5	H18	118.9	120.2
C5	C4	C3	121.2	121.0
C4	C5	H18	118.9	120.1
C5	C4	H19	119.4	119.5
C7	C2	C3	118.6	119.6
O	C	C13	117.5	120.0
O	C	N	126.8	120.0
N22	C21	H6	119.0	120.1
C2	C3	C4	121.8	121.0
C3	C4	H19	119.4	119.5
C4	C3	H20	119.1	119.5
C15	C17	H5	120.0	119.9
C13	C	N	115.7	119.9
C	C13	C19	123.1	120.0
C	N	C1	121.4	120.0
C	N	H9	119.3	120.0
C2	C3	H20	119.1	119.5
C2	C1	H10	107.4	109.5
C13	C19	C18	118.3	120.2
C13	C19	C20	120.5	120.0
C17	C18	H4	120.5	119.9
C20	C19	C18	121.2	119.9
C19	C18	H4	120.4	119.9
C19	C20	H1	109.5	109.5
C19	C20	H2	109.5	109.5
C19	C20	H3	109.4	109.5
N	C1	C12	109.8	109.5
C1	N	H9	119.3	120.0
N	C1	H10	108.1	109.5
C12	C1	H10	107.5	109.5
C1	C12	H11	109.5	109.5
C1	C12	H12	109.5	109.4
C1	C12	H13	109.5	109.5
H1	C20	H2	109.4	109.5
H1	C20	H3	109.5	109.4
H2	C20	H3	109.5	109.4
H11	C12	H12	109.4	109.5
H11	C12	H13	109.5	109.5
H12	C12	H13	109.5	109.5

Torsion Angles for Y96

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C11	C10	C9	H15	179.5	180.0
C10	C11	C6	C5	180.0	180.0
C6	C11	C10	H17	180.0	180.0
C10	C9	C8	H14	180.8	180.0
C6	C11	C10	H16	180.1	180.0
C10	C11	C6	H17	180.0	180.0
C11	C6	C5	C4	179.2	180.0
C11	C6	C5	H18	359.2	0.0
C5	C6	C11	H17	360.0	0.0
C6	C5	C4	C3	1.9	0.1
C4	C5	C6	H18	180.0	180.0
C6	C5	C4	H19	181.9	180.0
C6	C7	C2	C3	2.2	360.0
C8	C7	C2	C3	180.7	180.0
C6	C5	C4	H18	180.0	180.0
C2	C3	C4	C5	359.3	359.9
C3	C4	C5	H19	180.0	180.1
C5	C4	C3	H20	179.3	180.3
C7	C2	C3	C4	358.6	0.1
C7	C2	C3	H20	178.7	179.7
C7	C2	C1	H10	3.7	327.2
C13	C	O	N	181.6	180.3
O	C	C13	C19	71.9	353.6
O	C	N	C1	357.1	0.1
O	C	N	H9	177.1	180.0
O23	N22	C21	H6	358.2	360.0
C21	C15	C17	H5	359.6	0.1
C3	C4	C5	H18	181.9	180.0
C5	C4	C3	H19	180.0	179.9
C2	C3	C4	H20	180.0	179.6
C14	C15	C17	H5	178.0	179.7
C14	C13	C	N	73.0	353.8
C15	C17	C18	H4	180.2	180.0
O	C	C13	N	178.6	179.7
C13	C	N	C1	175.5	179.7
C13	C	N	H9	355.5	359.6
C	C13	C19	C18	180.3	180.0
C	C13	C19	C20	0.7	0.1
O	C	N	C13	181.6	180.3
N	C	C13	C19	253.4	174.0
C	N	C1	C12	221.0	272.7
C1	N	C	H9	180.0	180.1
C	N	C1	H10	338.0	32.7
C5	C4	C3	C2	359.3	359.9
C2	C3	C4	H19	179.3	180.0
C4	C3	C2	H20	180.0	180.4
C3	C2	C1	H10	180.4	146.9
C2	C1	N	H9	273.6	332.8
N	C1	C2	H10	243.9	240.0
C12	C1	C2	H10	120.4	120.0
C2	C1	C12	H11	180.0	180.0
C2	C1	C12	H12	300.0	300.0
C2	C1	C12	H13	60.0	60.0
C19	C13	C	N	253.4	174.0
C20	C19	C13	C18	180.3	180.1
C13	C19	C18	H4	180.4	180.1
C13	C19	C20	H1	89.9	83.2
C13	C19	C20	H2	209.9	203.2
C13	C19	C20	H3	329.8	323.2
C19	C18	C17	H4	180.0	180.0
C13	C19	C18	C20	180.3	180.1
C17	C18	C19	H4	180.0	180.0
C18	C19	C20	H1	270.2	263.3
C18	C19	C20	H2	30.2	23.3
C18	C19	C20	H3	150.2	143.3
C13	C19	C20	C18	179.7	179.9
C20	C19	C18	H4	0.1	360.0
H1	C20	C19	H2	240.0	240.0
H1	C20	C19	H3	120.0	120.0
H2	C20	C19	H3	240.0	240.0
C	N	C1	H9	180.0	179.9
C2	C1	N	H10	115.7	120.0
C12	C1	N	H10	243.0	240.0
N	C1	C12	H11	57.8	60.0
N	C1	C12	H12	177.7	180.0
N	C1	C12	H13	297.7	300.0
C2	C1	C12	H10	239.6	240.0
C12	C1	N	H9	41.0	92.8
N	C1	C12	H10	117.4	120.0
H11	C12	C1	H12	240.0	240.0
H11	C12	C1	H13	120.1	120.0
H12	C12	C1	H13	240.0	240.0
H1	C20	C19	C18	270.2	263.3
C19	C20	H1	H2	120.0	120.1
C19	C20	H1	H3	240.0	240.0
H2	C20	H1	H3	120.0	119.9
H2	C20	C19	C18	30.2	23.3
C19	C20	H2	H1	240.0	239.9
C19	C20	H2	H3	120.0	120.0
H1	C20	H2	H3	240.0	240.1
H3	C20	C19	C18	150.2	143.3
C19	C20	H3	H1	120.0	120.0
C19	C20	H3	H2	240.0	240.0
H1	C20	H3	H2	120.0	119.9
H5	C17	C18	H4	0.3	359.9
C	N	H9	C1	180.0	180.1
H9	N	C1	C12	41.0	92.8
H9	N	C1	H10	158.0	212.8
N	C1	H10	C12	241.5	240.0
H10	C1	N	H9	158.0	212.8
H10	C1	C12	H11	300.4	300.0
H10	C1	C12	H12	60.4	60.0
H10	C1	C12	H13	180.3	180.0
H11	C12	C1	H10	300.4	300.0
C1	C12	H11	H12	120.0	120.0
C1	C12	H11	H13	240.0	240.0
H12	C12	H11	H13	120.0	120.0
H12	C12	C1	H10	60.4	60.0
C1	C12	H12	H11	240.0	240.0
C1	C12	H12	H13	120.0	120.0
H11	C12	H12	H13	240.0	240.0
H13	C12	C1	H10	180.3	180.0
C1	C12	H13	H11	120.0	120.0
C1	C12	H13	H12	240.0	240.0
H11	C12	H13	H12	120.0	120.0
H15	C9	C8	H14	0.8	359.9
H16	C10	C11	C6	180.1	180.0
H16	C10	C11	H17	0.1	360.0
H16	C10	C9	H15	359.5	0.0
C10	C11	H17	C6	180.0	180.0
H17	C11	C10	H16	0.1	360.0
H17	C11	C6	C5	360.0	0.0
C6	C5	H18	C4	180.0	180.0
H18	C5	C4	C3	181.9	180.0
H18	C5	C4	H19	1.9	359.9
C5	C4	H19	C3	180.0	180.1
H19	C4	C5	H18	1.9	359.9
H19	C4	C3	H20	359.3	0.4
C2	C3	H20	C4	180.0	180.4
H20	C3	C4	H19	359.3	0.4