PDB Chemical Component Y94

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for Y94

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C22 C18 1.397 1.361
C22 C20 1.402 1.393
C18 C11 1.391 1.406
C20 C14 1.394 1.362
C11 C12 1.393 1.406
C11 C8 1.474 1.417
C14 C8 1.372 1.405
C12 C9 1.395 1.361
C27 N25 1.467 1.465
C27 C28 1.532 1.507
N25 C24 1.367 1.348
C8 C5 1.470 1.406
O7 C1 1.219 1.215
C24 O26 1.209 1.216
C24 N01 1.308 1.348
N01 C19 1.345 1.400
C9 C4 1.389 1.392
C28 C29 1.338 1.311
C13 C19 1.410 1.386
C13 C3 1.359 1.395
C19 C21 1.397 1.389
C5 C4 1.391 1.361
C5 C6 1.491 1.507
C1 C3 1.480 1.479
C1 N2 1.350 1.347
C3 C10 1.471 1.396
C21 C17 1.415 1.382
C10 C17 1.402 1.381
C10 C16 1.506 1.507
C6 N2 1.415 1.465
C6 C01 1.546 1.529
N25 H1 1.000 0.969
C27 H2 1.100 1.091
C27 H3 1.100 1.090
C28 H4 1.080 1.080
C29 H5 1.080 1.080
C29 H6 1.080 1.080
N01 H7 1.000 0.970
C13 H8 1.080 1.080
C21 H9 1.080 1.080
C17 H10 1.080 1.080
C16 H11 1.100 1.090
C16 H12 1.099 1.090
C16 H13 1.100 1.091
N2 H14 1.000 0.970
C6 H15 1.100 1.090
C01 H16 1.100 1.090
C01 H17 1.100 1.090
C01 H18 1.101 1.091
C14 H19 1.079 1.080
C20 H20 1.080 1.080
C22 H21 1.080 1.081
C18 H22 1.080 1.080
C12 H23 1.080 1.080
C9 H24 1.080 1.080
C4 H25 1.080 1.080

Bond Angles for Y94

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C22 C18 C11 119.6 119.6
C18 C22 H21 120.6 119.5
C22 C18 H22 120.2 120.2
C22 C20 H20 118.3 119.5
C18 C11 C12 120.1 121.3
C11 C18 H22 120.2 120.2
C20 C14 H19 120.5 120.2
C11 C12 C9 121.7 119.6
C11 C12 H23 119.2 120.2
C12 C9 C4 119.8 121.0
C9 C12 H23 119.1 120.2
C12 C9 H24 120.1 119.5
C27 N25 H1 116.9 120.0
C27 C28 C29 122.4 120.0
C28 C27 H2 108.9 109.5
C28 C27 H3 108.9 109.5
C27 C28 H4 118.8 120.0
N25 C24 N01 112.9 120.0
C8 C5 C4 118.5 119.7
O7 C1 N2 125.7 120.0
C24 N01 C19 135.8 120.0
C24 N01 H7 112.1 120.0
N01 C19 C21 130.3 120.0
C19 N01 H7 112.1 120.0
C5 C4 C9 123.0 121.0
C4 C9 H24 120.1 119.5
C9 C4 H25 118.5 119.5
C29 C28 H4 118.8 120.0
C28 C29 H5 120.0 120.0
C28 C29 H6 120.0 120.0
C13 C19 C21 121.2 120.0
C13 C3 C10 119.8 119.8
C3 C13 H8 119.7 120.0
C19 C21 C17 119.3 120.2
C19 C21 H9 120.4 119.9
C5 C4 H25 118.5 119.5
C5 C6 H15 108.2 109.5
C1 N2 H14 119.0 120.0
C17 C21 H9 120.4 119.9
C21 C17 H10 119.8 119.9
C10 C17 H10 119.8 119.9
C10 C16 H11 109.5 109.5
C10 C16 H12 109.5 109.5
C10 C16 H13 109.4 109.5
C6 N2 H14 119.1 120.0
C01 C6 H15 107.5 109.5
C6 C01 H16 109.5 109.5
C6 C01 H17 109.5 109.5
C6 C01 H18 109.5 109.5
H2 C27 H3 109.5 109.5
H5 C29 H6 120.0 120.0
H11 C16 H12 109.4 109.5
H11 C16 H13 109.5 109.4
H12 C16 H13 109.5 109.5
H16 C01 H17 109.4 109.5
H16 C01 H18 109.5 109.4
H17 C01 H18 109.5 109.4

Torsion Angles for Y94

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C18 C22 C20 H20 180.0 180.1
C22 C18 C11 C12 179.7 180.0
C11 C18 C22 H22 180.0 179.9
C22 C20 C14 H19 180.3 180.0
C11 C18 C22 H21 180.4 180.0
C22 C18 C11 H22 180.0 180.1
C18 C11 C12 C9 179.4 180.0
C18 C11 C12 H23 359.4 360.0
C12 C11 C18 H22 359.8 360.0
C11 C12 C9 C4 358.4 360.0
C9 C12 C11 H23 180.0 180.0
C11 C12 C9 H24 178.4 180.0
C11 C8 C5 C4 358.1 0.0
C14 C8 C5 C4 179.2 180.0
C11 C12 C9 H23 180.0 180.0
C5 C4 C9 C12 1.3 0.0
C4 C9 C12 H24 180.0 180.0
C12 C9 C4 H25 181.3 180.3
C27 N25 C24 N01 193.5 180.3
C28 C27 N25 H1 269.3 0.0
C29 C28 C27 H4 180.0 180.1
C27 C28 C29 H5 180.0 180.0
C27 C28 C29 H6 0.0 359.9
H2 C27 C28 H3 119.4 120.0
N25 C24 N01 C19 180.3 174.7
N25 C24 N01 H7 0.3 354.8
C8 C5 C4 C9 0.5 360.0
C8 C5 C4 H25 180.5 179.7
C8 C5 C6 H15 2.0 327.2
O7 C1 N2 H14 179.8 180.0
C24 N01 C19 C21 349.0 215.3
C19 N01 C24 H7 180.0 179.9
C24 N01 C19 H7 180.0 180.1
C13 C19 N01 C21 178.0 180.3
N01 C19 C21 C17 178.0 180.0
N01 C19 C21 H9 358.0 0.0
C4 C9 C12 H23 178.4 180.0
C12 C9 C4 H24 180.0 180.0
C5 C4 C9 H25 180.0 179.7
C29 C28 C27 H2 345.6 5.1
C29 C28 C27 H3 226.2 245.1
C27 C28 C29 H4 180.0 179.9
H5 C29 C28 H6 180.0 180.1
N01 C19 C13 C21 181.8 179.7
C13 C19 N01 H7 346.9 215.5
C13 C19 C21 C17 0.3 359.8
C13 C19 C21 H9 180.2 179.7
C3 C13 C19 C21 359.4 0.2
C21 C19 N01 H7 168.9 35.2
C17 C21 C19 H9 180.0 180.0
C19 C21 C17 H10 179.0 180.0
C12 C9 C4 C5 1.3 0.0
C5 C4 C9 H24 181.3 180.0
C9 C4 C5 H25 180.0 180.3
C4 C5 C6 H15 184.8 146.9
C5 C6 N2 H14 263.6 339.0
C01 C6 C5 H15 118.3 120.0
C5 C6 C01 H16 180.0 59.9
C5 C6 C01 H17 300.0 180.0
C5 C6 C01 H18 60.0 300.0
C1 C3 C13 H8 358.8 0.0
C6 N2 C1 H14 180.0 180.0
C10 C3 C13 H8 181.6 180.0
C3 C10 C17 H10 181.9 180.3
C3 C10 C16 H11 89.2 277.2
C3 C10 C16 H12 209.2 37.2
C3 C10 C16 H13 329.2 157.2
C19 C21 C17 H9 180.0 180.0
C10 C17 C21 H10 180.0 180.0
C13 C3 C10 C17 357.8 359.7
C10 C17 C21 H9 179.0 180.0
C21 C17 C10 H10 180.0 180.0
C13 C3 C10 C16 179.5 180.0
C16 C10 C17 H10 0.1 0.0
H11 C16 C10 H12 240.0 240.0
H11 C16 C10 H13 120.0 120.0
H12 C16 C10 H13 240.0 240.0
C1 N2 C6 H14 180.0 180.0
C5 C6 C01 H15 241.2 240.0
C01 C6 N2 H14 27.3 99.0
H16 C01 C6 H17 240.0 239.9
H16 C01 C6 H18 120.0 119.9
H17 C01 C6 H18 240.0 240.0
H1 N25 C24 N01 13.5 0.2
H2 C27 N25 H1 29.7 120.0
H2 C27 C28 C29 345.6 5.1
C28 C27 H2 H3 241.0 240.0
H2 C27 C28 H4 165.6 185.0
H3 C27 N25 H1 149.0 240.0
H3 C27 C28 C29 226.2 245.1
C28 C27 H3 H2 119.0 120.0
H3 C27 C28 H4 46.2 65.0
C27 C28 H4 C29 180.0 180.1
H4 C28 C27 H2 165.6 185.0
H4 C28 C27 H3 46.2 65.0
H4 C28 C29 H5 0.0 0.1
H4 C28 C29 H6 180.0 180.0
H5 C29 C28 H4 0.0 0.1
C28 C29 H5 H6 180.0 179.9
H6 C29 C28 H4 180.0 180.0
C28 C29 H6 H5 180.0 180.1
C24 N01 H7 C19 180.0 179.9
H7 N01 C19 C21 168.9 35.2
H8 C13 C19 C21 179.4 180.2
H8 C13 C3 C10 181.6 180.0
C19 C21 H9 C17 180.0 180.0
H9 C21 C17 H10 359.0 0.0
H10 C17 C21 H9 359.0 0.0
C10 C16 H11 H12 120.0 120.0
C10 C16 H11 H13 240.0 240.0
H12 C16 H11 H13 120.0 120.0
C10 C16 H12 H11 240.0 240.0
C10 C16 H12 H13 120.0 120.0
H11 C16 H12 H13 240.0 240.0
C10 C16 H13 H11 120.0 120.0
C10 C16 H13 H12 240.0 240.0
H11 C16 H13 H12 120.0 120.0
H15 C6 N2 H14 145.7 219.0
H15 C6 C01 H16 298.8 180.0
H15 C6 C01 H17 58.7 300.0
H15 C6 C01 H18 178.8 60.1
H16 C01 C6 H15 298.8 180.0
C6 C01 H16 H17 120.0 120.1
C6 C01 H16 H18 240.0 240.0
H17 C01 H16 H18 120.0 119.9
H17 C01 C6 H15 58.7 300.0
C6 C01 H17 H16 240.0 239.9
C6 C01 H17 H18 120.0 120.0
H16 C01 H17 H18 240.0 240.1
H18 C01 C6 H15 178.8 60.1
C6 C01 H18 H16 120.0 120.0
C6 C01 H18 H17 240.0 239.9
H16 C01 H18 H17 119.9 120.0
H20 C20 C14 H19 0.3 359.9
H21 C22 C18 C11 180.4 180.0
H21 C22 C18 H22 0.3 0.1
H21 C22 C20 H20 0.1 0.0
C22 C18 H22 C11 180.0 179.9
H22 C18 C22 H21 0.3 0.1
H22 C18 C11 C12 359.8 360.0
C11 C12 H23 C9 180.0 180.0
H23 C12 C9 C4 178.4 180.0
H23 C12 C9 H24 358.4 0.0
C12 C9 H24 C4 180.0 180.0
H24 C9 C12 H23 358.4 0.0
H24 C9 C4 H25 1.3 0.3
C5 C4 H25 C9 180.0 180.3
H25 C4 C9 H24 1.3 0.3