PDB Chemical Component XX5

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for XX5

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O1	C2	1.221	1.226
C2	O3	1.220	1.355
C2	C4	1.552	1.520
C4	C5	1.542	1.536
C4	N9	1.469	1.440
C4	HC4	1.115	1.098
C5	C6	1.521	1.545
C5	HC51	1.115	1.099
C5	HC52	1.115	1.099
C6	C7	1.515	1.534
C6	C8	1.533	1.527
C6	HC6	1.115	1.096
C7	HC71	1.115	1.094
C7	HC72	1.115	1.096
C7	HC73	1.115	1.096
C8	HC81	1.115	1.095
C8	HC82	1.115	1.094
C8	HC83	1.115	1.095
N9	C10	1.468	1.462
N9	HN9	1.020	1.026
C10	C11	1.562	1.522
C10	C14	1.554	1.534
C10	H10	1.115	1.096
C11	O12	1.227	1.355
C11	O13	1.224	1.227
O12	H12	0.950	0.981
C14	C15	1.518	1.509
C14	H141	1.115	1.098
C14	H142	1.115	1.098
C15	C16	1.409	1.350
C15	N19	1.399	1.347
C16	N17	1.327	1.373
C16	H16	1.103	1.081
N17	C18	1.351	1.315
C18	N19	1.340	1.367
C18	H18	1.103	1.081
N19	C20	1.530	1.444
C20	C21	1.557	1.504
C20	H201	1.115	1.098
C20	H202	1.115	1.097
C21	C22	1.430	1.388
C21	C26	1.448	1.388
C22	C23	1.449	1.395
C22	H22	1.103	1.088
C23	CL24	1.776	1.721
C23	C25	1.418	1.395
C25	C27	1.407	1.395
C25	H25	1.103	1.088
C26	C27	1.458	1.395
C26	H26	1.103	1.088
C27	CL28	1.797	1.721
HO1	O3	0.950	0.980

Bond Angles for XX5

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O1	C2	O3	120.9	122.3
O1	C2	C4	118.8	123.1
O3	C2	C4	120.3	114.5
C2	C4	C5	116.5	113.0
C2	C4	N9	113.5	113.2
C2	C4	HC4	100.6	105.4
C5	C4	N9	107.3	112.3
C5	C4	HC4	107.7	108.1
C4	C5	C6	121.5	117.7
C4	C5	HC51	107.9	107.3
C4	C5	HC52	107.9	108.9
N9	C4	HC4	111.0	104.1
C4	N9	C10	115.4	111.6
C4	N9	HN9	110.1	110.0
C6	C5	HC51	107.9	107.2
C6	C5	HC52	107.9	109.2
C5	C6	C7	107.5	109.2
C5	C6	C8	111.5	113.9
C5	C6	HC6	108.6	109.1
HC51	C5	HC52	101.9	105.9
C7	C6	C8	106.9	109.4
C7	C6	HC6	113.1	107.0
C6	C7	HC71	112.9	110.9
C6	C7	HC72	107.5	111.2
C6	C7	HC73	112.9	110.9
C8	C6	HC6	109.3	108.0
C6	C8	HC81	111.5	111.4
C6	C8	HC82	111.5	111.1
C6	C8	HC83	111.5	111.0
HC71	C7	HC72	112.9	108.1
HC71	C7	HC73	97.5	107.6
HC72	C7	HC73	113.0	108.0
HC81	C8	HC82	111.5	108.7
HC81	C8	HC83	98.9	107.8
HC82	C8	HC83	111.5	106.6
C10	N9	HN9	110.1	108.4
N9	C10	C11	115.5	111.1
N9	C10	C14	110.3	111.2
N9	C10	H10	104.8	106.2
C11	C10	C14	110.0	109.9
C11	C10	H10	105.1	106.9
C10	C11	O12	117.8	114.8
C10	C11	O13	120.0	123.0
C14	C10	H10	110.9	111.4
C10	C14	C15	109.8	113.0
C10	C14	H141	112.1	110.4
C10	C14	H142	112.1	110.1
O12	C11	O13	122.2	122.2
C11	O12	H12	117.9	114.8
C15	C14	H141	112.1	108.1
C15	C14	H142	112.1	109.8
C14	C15	C16	124.9	130.5
C14	C15	N19	125.3	122.3
H141	C14	H142	98.3	105.2
C16	C15	N19	109.9	107.3
C15	C16	N17	106.9	110.0
C15	C16	H16	128.9	128.9
C15	N19	C18	101.6	106.2
C15	N19	C20	129.0	128.2
N17	C16	H16	124.3	121.1
C16	N17	C18	106.6	104.7
N17	C18	N19	115.1	111.8
N17	C18	H18	122.8	125.7
N19	C18	H18	122.0	122.5
C18	N19	C20	129.4	125.6
N19	C20	C21	121.8	111.4
N19	C20	H201	107.8	108.2
N19	C20	H202	107.8	108.2
C21	C20	H201	107.8	111.2
C21	C20	H202	107.8	111.2
C20	C21	C22	120.1	119.5
C20	C21	C26	123.0	119.6
H201	C20	H202	102.0	106.5
C22	C21	C26	116.9	120.9
C21	C22	C23	120.9	119.5
C21	C22	H22	118.9	120.2
C21	C26	C27	121.9	119.6
C21	C26	H26	118.7	120.2
C23	C22	H22	120.2	120.2
C22	C23	CL24	121.2	120.0
C22	C23	C25	121.2	120.0
CL24	C23	C25	117.6	120.0
C23	C25	C27	119.6	120.0
C23	C25	H25	120.6	120.0
C27	C25	H25	119.8	120.0
C25	C27	C26	119.5	120.0
C25	C27	CL28	118.3	120.0
C27	C26	H26	119.4	120.3
C26	C27	CL28	122.2	120.0

Torsion Angles for XX5

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O3	C2	O1	C4	179.7	177.2
O1	C2	C4	C5	261.7	92.2
O1	C2	C4	N9	136.3	323.2
O1	C2	C4	HC4	17.6	210.0
O1	C2	O3	C4	180.3	182.6
O3	C2	C4	C5	81.9	274.8
O3	C2	C4	N9	316.6	145.8
O3	C2	C4	HC4	197.9	32.6
O1	C2	C4	O3	179.7	177.4
C5	C4	C2	N9	125.4	129.0
C5	C4	C2	HC4	244.0	242.2
C2	C4	C5	C6	3.1	179.1
C2	C4	C5	HC51	237.9	300.0
C2	C4	C5	HC52	128.4	54.2
N9	C4	C2	HC4	118.7	113.2
C2	C4	N9	C10	273.6	299.6
C2	C4	N9	HN9	148.4	60.0
C2	C4	C5	N9	231.5	230.5
C2	C4	C5	HC4	111.9	116.3
N9	C4	C5	HC4	240.4	245.7
C5	C4	N9	C10	143.5	170.3
C5	C4	N9	HN9	18.2	290.7
C6	C5	C4	HC51	125.3	239.1
C6	C5	C4	HC52	234.7	124.9
C4	C5	C6	C7	183.5	300.9
C4	C5	C6	C8	66.6	63.5
C4	C5	C6	HC6	306.2	184.2
HC51	C5	C4	HC52	109.5	245.8
C2	C4	N9	C5	130.1	129.4
C2	C4	N9	HC4	247.6	246.0
C5	C4	N9	HC4	117.4	116.7
N9	C4	C5	C6	131.6	308.6
N9	C4	C5	HC51	6.3	69.4
N9	C4	C5	HC52	256.9	183.7
C10	N9	C4	HN9	125.3	239.6
C4	N9	C10	C11	312.3	301.4
C4	N9	C10	C14	186.8	178.6
C4	N9	C10	H10	67.4	57.3
C2	C4	HC4	C5	237.6	238.9
C2	C4	HC4	N9	120.5	119.4
C5	C4	HC4	N9	242.8	240.4
HC4	C4	C5	C6	251.2	62.9
HC4	C4	C5	HC51	125.9	183.7
HC4	C4	C5	HC52	16.5	297.9
HC4	C4	N9	C10	26.1	53.6
HC4	C4	N9	HN9	260.8	174.0
C6	C5	C4	N9	131.6	308.6
C6	C5	C4	HC4	251.2	62.9
C4	C5	C6	HC51	234.7	120.9
C4	C5	C6	HC52	125.2	235.2
HC51	C5	C6	HC52	250.5	114.3
C7	C6	C5	C8	116.8	237.4
C7	C6	C5	HC6	237.3	116.7
C5	C6	C7	HC71	54.7	302.8
C5	C6	C7	HC72	180.0	63.2
C5	C6	C7	HC73	305.3	183.4
C8	C6	C5	HC6	120.4	239.3
C5	C6	C8	HC81	54.7	309.6
C5	C6	C8	HC82	180.0	71.0
C5	C6	C8	HC83	305.3	189.4
HC51	C5	C4	N9	6.3	69.4
HC51	C5	C4	HC4	125.9	183.7
C4	C5	HC51	C6	133.0	232.7
C4	C5	HC51	HC52	246.5	116.2
C6	C5	HC51	HC52	113.5	243.5
HC51	C5	C6	C7	308.8	180.0
HC51	C5	C6	C8	191.9	302.6
HC51	C5	C6	HC6	71.5	63.3
HC52	C5	C4	N9	256.9	183.7
HC52	C5	C4	HC4	16.5	297.9
C4	C5	HC52	C6	227.1	129.8
C4	C5	HC52	HC51	113.5	244.9
C6	C5	HC52	HC51	246.5	115.1
HC52	C5	C6	C7	58.2	65.7
HC52	C5	C6	C8	301.4	188.3
HC52	C5	C6	HC6	181.0	309.0
C7	C6	C5	HC51	308.8	180.0
C7	C6	C5	HC52	58.2	65.7
C5	C6	C7	C8	240.2	125.2
C5	C6	C7	HC6	119.9	242.0
C8	C6	C7	HC6	239.7	116.8
C7	C6	C8	HC81	297.5	72.0
C7	C6	C8	HC82	62.8	193.4
C7	C6	C8	HC83	188.0	311.8
HC71	C7	C6	HC72	234.8	239.6
HC71	C7	C6	HC73	109.5	119.4
HC72	C7	C6	HC73	234.7	239.8
C8	C6	C5	HC51	191.9	302.6
C8	C6	C5	HC52	301.4	188.3
C5	C6	C8	C7	117.2	237.5
C5	C6	C8	HC6	240.0	121.4
C7	C6	C8	HC6	122.7	243.9
C8	C6	C7	HC71	174.6	177.6
C8	C6	C7	HC72	299.8	297.9
C8	C6	C7	HC73	65.1	58.1
HC81	C8	C6	HC82	234.7	238.6
HC81	C8	C6	HC83	109.4	120.2
HC82	C8	C6	HC83	234.7	241.6
HC6	C6	C5	HC51	71.5	63.3
HC6	C6	C5	HC52	181.0	309.0
C5	C6	HC6	C7	240.7	118.0
C5	C6	HC6	C8	121.8	235.7
C7	C6	HC6	C8	241.1	117.7
HC6	C6	C7	HC71	294.8	60.8
HC6	C6	C7	HC72	60.1	181.2
HC6	C6	C7	HC73	185.4	301.4
HC6	C6	C8	HC81	174.7	188.2
HC6	C6	C8	HC82	300.0	309.6
HC6	C6	C8	HC83	65.3	68.0
HC71	C7	C6	C8	174.6	177.6
HC71	C7	C6	HC6	294.8	60.8
C6	C7	HC71	HC72	122.3	122.2
C6	C7	HC71	HC73	241.2	238.6
HC72	C7	HC71	HC73	118.9	116.4
HC72	C7	C6	C8	299.8	297.9
HC72	C7	C6	HC6	60.1	181.2
C6	C7	HC72	HC71	234.7	238.0
C6	C7	HC72	HC73	125.3	121.9
HC71	C7	HC72	HC73	250.5	243.9
HC73	C7	C6	C8	65.1	58.1
HC73	C7	C6	HC6	185.4	301.4
C6	C7	HC73	HC71	118.9	121.4
C6	C7	HC73	HC72	237.7	237.9
HC71	C7	HC73	HC72	118.8	116.5
HC81	C8	C6	HC6	174.7	188.2
C6	C8	HC81	HC82	125.3	122.8
C6	C8	HC81	HC83	242.7	238.0
HC82	C8	HC81	HC83	117.4	115.2
HC82	C8	C6	HC6	300.0	309.6
C6	C8	HC82	HC81	234.7	237.0
C6	C8	HC82	HC83	125.3	121.0
HC81	C8	HC82	HC83	250.5	244.0
HC83	C8	C6	HC6	65.3	68.0
C6	C8	HC83	HC81	117.3	122.3
C6	C8	HC83	HC82	234.7	238.9
HC81	C8	HC83	HC82	117.4	116.6
C10	N9	C4	HC4	26.1	53.6
C4	N9	C10	HN9	234.7	121.3
C11	C10	N9	C14	125.5	122.8
C11	C10	N9	H10	244.9	244.1
N9	C10	C11	O12	111.1	115.1
N9	C10	C11	O13	290.6	295.5
C14	C10	N9	H10	119.4	121.3
N9	C10	C14	C15	188.5	201.8
N9	C10	C14	H141	63.2	322.9
N9	C10	C14	H142	313.7	78.7
HN9	N9	C4	HC4	260.8	174.0
C4	N9	HN9	C10	128.3	237.7
HN9	N9	C10	C11	77.7	180.0
HN9	N9	C10	C14	312.1	57.2
HN9	N9	C10	H10	192.7	295.9
C11	C10	N9	HN9	77.7	180.0
N9	C10	C11	C14	234.3	236.5
N9	C10	C11	H10	114.9	115.5
C14	C10	C11	H10	240.6	239.0
C11	C10	C14	C15	59.9	78.3
C11	C10	C14	H141	294.6	199.4
C11	C10	C14	H142	185.1	315.2
O12	C11	C10	O13	180.5	179.6
C10	C11	O12	H12	180.0	180.4
C14	C10	N9	HN9	312.1	57.2
N9	C10	C14	C11	128.6	123.5
N9	C10	C14	H10	244.4	241.8
C11	C10	C14	H10	115.8	118.3
C14	C10	C11	O12	236.8	238.6
C14	C10	C11	O13	56.3	59.0
C15	C14	C10	H141	125.3	238.9
C15	C14	C10	H142	234.7	123.1
C10	C14	C15	C16	53.7	269.9
C10	C14	C15	N19	234.0	90.0
H141	C14	C10	H142	109.5	244.2
H10	C10	N9	HN9	192.7	295.9
N9	C10	H10	C11	237.8	241.3
N9	C10	H10	C14	119.0	121.2
C11	C10	H10	C14	241.2	239.9
H10	C10	C11	O12	356.2	359.6
H10	C10	C11	O13	175.7	180.0
H10	C10	C14	C15	304.1	320.0
H10	C10	C14	H141	178.8	81.1
H10	C10	C14	H142	69.3	196.9
O12	C11	C10	C14	236.8	238.6
O12	C11	C10	H10	356.2	359.6
C10	C11	O12	O13	179.5	180.4
O13	C11	C10	C14	56.3	59.0
O13	C11	C10	H10	175.7	180.0
C10	C11	O13	O12	180.5	179.5
O13	C11	O12	H12	0.5	360.0
H12	O12	C11	O13	0.5	360.0
C15	C14	C10	H10	304.1	320.0
C10	C14	C15	H141	234.7	122.4
C10	C14	C15	H142	125.3	236.6
H141	C14	C15	H142	250.5	114.3
C16	C15	C14	N19	179.7	179.9
C14	C15	C16	N17	180.5	180.1
C14	C15	C16	H16	0.5	0.0
C14	C15	N19	C18	179.5	180.0
C14	C15	N19	C20	359.6	360.0
H141	C14	C10	H10	178.8	81.1
C10	C14	H141	C15	124.0	236.0
C10	C14	H141	H142	242.0	118.8
C15	C14	H141	H142	118.0	242.8
H141	C14	C15	C16	178.9	147.5
H141	C14	C15	N19	359.3	327.6
H142	C14	C10	H10	69.3	196.9
C10	C14	H142	C15	236.0	125.0
C10	C14	H142	H141	118.0	241.1
C15	C14	H142	H141	242.0	116.1
H142	C14	C15	C16	288.4	33.2
H142	C14	C15	N19	108.7	213.3
C16	C15	C14	H141	178.9	147.5
C16	C15	C14	H142	288.4	33.2
C14	C15	C16	N19	180.3	180.1
C16	C15	N19	C18	359.8	0.0
C16	C15	N19	C20	179.9	180.0
N17	C16	C15	H16	180.0	180.1
C15	C16	N17	C18	359.9	360.0
N19	C15	C14	H141	359.3	327.6
N19	C15	C14	H142	108.7	213.3
C14	C15	N19	C16	179.7	179.9
N19	C15	C16	N17	0.2	0.0
N19	C15	C16	H16	180.2	179.9
N17	C18	N19	C15	0.2	360.0
C15	N19	C18	H18	180.2	180.0
C18	N19	C15	C20	179.8	180.0
C15	N19	C20	C21	280.9	90.0
C15	N19	C20	H201	155.7	327.5
C15	N19	C20	H202	46.2	212.5
N17	C16	C15	N19	0.2	0.0
C15	C16	N17	H16	180.0	179.9
C16	N17	C18	N19	360.0	0.0
C16	N17	C18	H18	180.0	180.0
H16	C16	C15	N19	180.2	179.9
C15	C16	H16	N17	180.0	180.1
H16	C16	N17	C18	179.9	180.0
C15	N19	C18	N17	0.2	360.0
C18	N17	C16	H16	179.9	180.0
N19	C18	N17	H18	180.0	180.0
N17	C18	N19	C20	180.0	179.9
C15	N19	C18	C20	180.2	180.0
N17	C18	N19	H18	180.0	180.0
C18	N19	C20	C21	101.1	270.0
C18	N19	C20	H201	335.9	147.5
C18	N19	C20	H202	226.4	32.5
N17	C18	H18	N19	180.0	180.0
H18	C18	N19	C20	0.0	360.0
C15	N19	C20	C18	179.8	180.0
C20	N19	C18	H18	0.0	360.0
C21	C20	N19	H201	125.3	122.5
C21	C20	N19	H202	234.7	237.5
N19	C20	C21	C22	331.0	45.0
N19	C20	C21	C26	150.9	224.9
H201	C20	N19	H202	109.5	115.0
N19	C20	C21	H201	234.8	239.2
N19	C20	C21	H202	125.3	120.8
H201	C20	C21	H202	250.5	241.6
C22	C21	C20	C26	180.1	180.1
C20	C21	C22	C23	180.0	179.9
C20	C21	C22	H22	359.9	360.0
C20	C21	C26	C27	180.1	180.1
C20	C21	C26	H26	0.1	0.1
N19	C20	H201	C21	133.2	122.7
N19	C20	H201	H202	246.6	243.9
C21	C20	H201	H202	113.4	121.2
H201	C20	C21	C22	96.3	165.8
H201	C20	C21	C26	276.2	345.7
N19	C20	H202	C21	226.8	237.3
N19	C20	H202	H201	113.4	116.1
C21	C20	H202	H201	246.6	238.8
H202	C20	C21	C22	205.8	284.2
H202	C20	C21	C26	25.7	104.1
C22	C21	C20	H201	96.3	165.8
C22	C21	C20	H202	205.8	284.2
C20	C21	C22	C26	179.9	179.9
C22	C21	C26	C27	0.0	360.0
C22	C21	C26	H26	180.0	180.0
C23	C22	C21	H22	180.0	180.0
C21	C22	C23	CL24	180.1	180.0
C21	C22	C23	C25	359.9	0.0
C26	C21	C20	H201	276.2	345.7
C26	C21	C20	H202	25.7	104.1
C20	C21	C26	C22	180.1	180.1
C26	C21	C22	C23	0.1	0.0
C26	C21	C22	H22	180.0	180.0
C25	C27	C26	C21	359.9	0.0
C27	C26	C21	H26	180.0	179.9
C21	C26	C27	CL28	179.8	179.9
C23	C22	C21	C26	0.1	0.0
C21	C22	C23	H22	180.0	180.0
CL24	C23	C22	C25	180.2	180.0
C22	C23	C25	C27	0.1	0.0
C22	C23	C25	H25	180.1	180.0
H22	C22	C21	C26	180.0	180.0
C21	C22	H22	C23	180.0	180.0
H22	C22	C23	CL24	0.1	359.9
H22	C22	C23	C25	179.9	180.0
CL24	C23	C22	H22	0.1	359.9
C22	C23	CL24	C25	179.8	180.0
CL24	C23	C25	C27	179.9	180.0
CL24	C23	C25	H25	359.9	0.0
C25	C23	C22	H22	179.9	180.0
C22	C23	C25	CL24	180.2	180.0
C27	C25	C23	H25	180.0	180.0
C23	C25	C27	C26	360.0	360.0
C23	C25	C27	CL28	180.1	180.1
C21	C26	C27	C25	359.9	0.0
C23	C25	C27	H25	180.0	180.0
C25	C27	C26	H26	179.9	180.0
C26	C27	C25	CL28	179.9	179.9
C23	C25	H25	C27	180.0	180.0
H25	C25	C27	C26	180.0	180.0
H25	C25	C27	CL28	0.1	0.1
C21	C26	C27	H26	180.0	180.1
C26	C27	C25	H25	180.0	180.0
C25	C27	C26	CL28	180.1	180.1
C21	C26	H26	C27	180.0	179.9
H26	C26	C27	CL28	359.8	359.9
CL28	C27	C25	H25	0.1	0.1
C25	C27	CL28	C26	179.9	179.9
CL28	C27	C26	H26	359.8	359.9