PDB Chemical Component XU2

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for XU2

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C5	C6	1.378	1.378
C5	C1	1.365	1.388
C6	C7	1.368	1.394
C1	C2	1.392	1.379
C7	C8	1.447	1.469
C7	C3	1.322	1.410
C2	C3	1.376	1.392
O12	C8	1.160	1.217
C8	N1	1.279	1.345
C3	C4	1.422	1.472
N1	C9	1.342	1.381
C4	C9	1.351	1.402
C4	C12	1.332	1.403
N3	C12	1.366	1.388
N3	C13	1.421	1.399
C9	N2	1.337	1.329
C12	C11	1.366	1.394
C13	C18	1.387	1.390
C13	C14	1.398	1.390
C18	C17	1.366	1.380
C14	C15	1.407	1.380
N2	C10	1.295	1.318
C17	C16	1.377	1.388
C11	C10	1.345	1.380
C15	C16	1.394	1.389
C16	N4	1.426	1.401
O38	C19	1.281	1.215
N4	C19	1.450	1.348
C19	C20	1.499	1.478
C20	C21	1.423	1.396
C20	C25	1.409	1.396
C21	C22	1.391	1.379
C25	C24	1.389	1.380
C22	C23	1.390	1.384
C24	C23	1.397	1.383
C6	H1	1.080	1.080
C5	H2	1.080	1.080
C1	H3	1.080	1.079
C2	H4	1.080	1.080
N1	H5	1.000	0.970
C10	H6	1.080	1.080
C11	H7	1.080	1.080
N3	H8	1.000	0.970
C14	H9	1.080	1.079
C15	H10	1.079	1.081
C18	H11	1.081	1.080
C17	H12	1.080	1.081
N4	H13	1.000	0.971
C21	H14	1.080	1.080
C22	H15	1.080	1.080
C23	H16	1.080	1.080
C24	H17	1.080	1.080
C25	H18	1.080	1.079

Bond Angles for XU2

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C5	C6	H1	118.3	120.2
C5	C1	C2	118.1	120.6
C1	C5	H2	121.4	119.6
C5	C1	H3	121.0	119.7
C6	C7	C3	120.1	119.6
C1	C2	C3	123.3	119.6
C2	C1	H3	121.0	119.7
C1	C2	H4	118.4	120.2
C7	C8	N1	124.0	120.5
C7	C3	C2	117.8	119.9
C7	C3	C4	117.1	118.3
C2	C3	C4	125.1	121.8
C3	C2	H4	118.3	120.2
O12	C8	N1	109.0	119.7
C8	N1	C9	120.2	122.4
C8	N1	H5	119.9	118.8
C3	C4	C9	123.2	119.5
C3	C4	C12	123.2	121.0
C4	C9	N1	118.4	120.6
N1	C9	N2	113.8	119.8
C9	N1	H5	119.9	118.8
C9	C4	C12	113.4	119.5
C4	C9	N2	127.8	119.7
C4	C12	C11	121.7	118.0
N3	C13	C18	113.0	120.0
N3	C13	C14	129.4	120.0
C13	N3	H8	119.8	119.9
C9	N2	C10	115.6	122.1
C12	C11	H7	120.3	120.4
C14	C13	C18	117.6	120.0
C13	C18	C17	124.2	120.0
C13	C18	H11	117.9	120.0
C13	C14	C15	118.7	120.0
C13	C14	H9	120.6	120.0
C18	C17	C16	118.5	120.0
C17	C18	H11	117.9	120.1
C18	C17	H12	120.8	119.9
C14	C15	C16	121.3	120.0
C15	C14	H9	120.7	120.1
C14	C15	H10	119.3	120.0
N2	C10	H6	119.0	119.2
C15	C16	C17	119.6	120.0
C17	C16	N4	111.9	120.0
C16	C17	H12	120.7	120.0
C11	C10	H6	119.0	119.2
C15	C16	N4	128.5	120.0
C16	C15	H10	119.3	120.0
C16	N4	C19	132.0	120.0
C16	N4	H13	113.9	120.0
O38	C19	C20	119.8	120.1
N4	C19	C20	104.1	120.0
C19	N4	H13	114.0	120.0
C19	C20	C21	120.8	120.1
C19	C20	C25	118.0	120.2
C21	C20	C25	120.8	119.7
C20	C21	C22	121.5	119.9
C20	C21	H14	119.3	120.0
C20	C25	C24	117.0	119.8
C20	C25	H18	121.5	120.1
C21	C22	C23	116.4	120.2
C22	C21	H14	119.2	120.1
C21	C22	H15	121.8	119.9
C25	C24	H17	119.4	119.9
C23	C22	H15	121.8	119.9
C22	C23	H16	118.5	119.9
C24	C23	H16	118.5	119.8

Torsion Angles for XU2

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C5	C6	C7	C3	0.2	360.0
C1	C5	C6	H1	179.7	180.0
C5	C1	C2	C3	356.2	359.9
C2	C1	C5	H3	180.0	180.0
C5	C1	C2	H4	176.2	179.9
C6	C7	C8	N1	179.4	180.2
C6	C7	C3	C2	358.2	360.0
C6	C7	C3	C4	180.1	180.0
C2	C1	C5	H2	182.0	180.0
C5	C1	C2	H3	180.0	180.0
C7	C3	C2	C1	3.7	0.1
C1	C2	C3	C4	181.6	180.0
C3	C2	C1	H4	180.0	180.0
O12	C8	C7	N1	179.9	179.7
C7	C8	N1	C9	0.9	359.4
C7	C8	N1	H5	180.9	179.8
C1	C2	C3	C7	3.7	0.1
C3	C7	C8	N1	357.4	0.2
C2	C3	C7	C4	178.1	179.9
C7	C3	C2	H4	183.7	180.1
C7	C3	C4	C9	359.9	0.0
C7	C3	C4	C12	174.2	179.9
C3	C2	C1	H3	176.2	179.9
C1	C2	C3	H4	180.0	180.0
C7	C3	C2	C4	182.0	180.1
C2	C3	C4	C9	181.9	180.1
C2	C3	C4	C12	356.2	0.0
C7	C8	O12	N1	180.1	180.3
O12	C8	N1	C9	181.0	179.7
O12	C8	N1	H5	1.0	0.1
C4	C9	N1	C8	1.2	0.6
C8	N1	C9	N2	181.4	180.3
C9	N1	C8	H5	180.0	179.7
C7	C3	C4	C2	178.0	179.9
C4	C3	C2	H4	1.6	360.0
C3	C4	C9	N1	358.3	359.7
C9	C4	C3	C12	185.7	180.1
C3	C4	C9	N2	178.1	180.0
C3	C4	C12	C11	183.3	180.0
C8	N1	C9	H5	180.0	180.3
N1	C9	C4	C12	183.5	179.8
C4	C9	N1	N2	179.8	180.3
N1	C9	N2	C10	176.1	180.2
C8	N1	C9	C4	1.2	0.6
C3	C4	C9	C12	174.8	179.9
N1	C9	C4	N2	180.2	179.7
C4	C9	N1	H5	181.2	180.3
C9	C4	C12	C11	358.1	359.9
C4	C9	N2	C10	356.3	359.9
C3	C4	C12	C9	185.2	180.1
C12	C4	C9	N1	183.5	179.8
C12	C4	C9	N2	3.3	0.1
C4	C12	C11	H7	181.1	180.1
N3	C12	C11	H7	356.8	0.1
C14	C13	N3	C18	182.2	180.2
N3	C13	C18	C17	182.9	180.0
N3	C13	C18	H11	2.9	360.0
N3	C13	C14	C15	177.9	180.0
N3	C13	C14	H9	357.9	0.0
C4	C9	N2	N1	180.2	179.7
N2	C9	N1	H5	1.4	360.0
N2	C9	C4	C12	3.3	0.1
C9	N2	C10	H6	182.5	180.0
C12	C11	C10	H6	178.5	180.0
N3	C13	C18	C14	181.9	180.2
C18	C13	N3	H8	304.7	5.2
C18	C13	C14	C15	0.2	0.3
C18	C13	C14	H9	180.2	180.3
C13	C18	C17	C16	359.7	0.0
C17	C18	C13	H11	180.0	180.0
C13	C18	C17	H12	179.7	180.0
N3	C13	C14	C18	177.7	179.8
C14	C13	N3	H8	126.9	185.4
C14	C13	C18	C17	1.0	359.7
C14	C13	C18	H11	181.0	179.7
C13	C14	C15	C16	358.0	360.0
C15	C14	C13	H9	180.0	180.0
C13	C14	C15	H10	178.0	180.0
C13	C18	C17	H11	180.0	180.0
C15	C16	C17	C18	358.4	0.2
C18	C17	C16	N4	180.7	180.0
C16	C17	C18	H12	180.0	180.0
C15	C14	C13	C18	0.2	0.3
C13	C14	C15	H9	180.0	180.0
C14	C15	C16	C17	2.7	359.8
C14	C15	C16	N4	180.0	180.0
C16	C15	C14	H10	180.0	180.0
C11	C10	N2	H6	180.0	180.0
C16	C17	C18	H11	179.7	180.0
C18	C17	C16	H12	180.0	180.0
C15	C16	C17	N4	177.7	180.2
C17	C16	C15	H10	182.8	179.7
C17	C16	N4	C19	2.3	215.5
C17	C16	N4	H13	182.2	35.4
C4	C12	C11	C10	1.1	0.1
N2	C10	C11	H6	180.0	180.0
C18	C17	C16	C15	358.4	0.2
C16	C15	C14	H9	178.0	180.0
C14	C15	C16	H10	180.0	180.0
C17	C16	C15	N4	182.7	179.8
C15	C16	C17	H12	178.4	180.3
C15	C16	N4	C19	184.8	35.3
C15	C16	N4	H13	4.8	215.2
C15	C16	N4	C17	182.5	179.8
N4	C16	C17	H12	0.7	0.1
N4	C16	C15	H10	0.1	359.9
C16	N4	C19	C20	207.1	175.4
C19	N4	C16	H13	180.0	180.1
N4	C19	O38	C20	171.3	180.1
O38	C19	N4	H13	214.8	175.4
O38	C19	C20	C21	24.2	0.1
O38	C19	C20	C25	197.9	179.7
C16	N4	C19	H13	180.0	179.9
O38	C19	N4	C20	187.7	179.9
N4	C19	C20	C21	210.4	180.0
N4	C19	C20	C25	24.1	359.7
C20	C19	N4	H13	27.1	355.5
C21	C20	C19	C25	186.3	180.3
C19	C20	C21	C22	175.3	180.0
C19	C20	C21	H14	355.3	359.9
C19	C20	C25	C24	182.5	179.7
C19	C20	C25	H18	2.5	0.0
C19	C20	C21	C25	173.5	179.7
C21	C20	C25	C24	356.2	359.4
C21	C20	C25	H18	176.2	179.7
C20	C21	C22	C23	0.2	359.9
C22	C21	C20	H14	180.0	180.1
C20	C21	C22	H15	180.2	180.0
C19	C20	C25	C21	186.3	180.3
C25	C20	C21	C22	1.8	0.3
C25	C20	C21	H14	181.8	180.2
C20	C25	C24	H17	183.9	180.3
C22	C21	C20	C25	1.8	0.3
C20	C21	C22	H14	180.0	179.9
C23	C22	C21	H15	180.0	180.0
C21	C22	C23	H16	180.0	180.0
C20	C25	C24	H18	180.0	180.3
C25	C24	C23	H16	177.9	179.8
C23	C22	C21	H14	180.2	180.0
C21	C22	C23	H15	180.0	180.0
C24	C23	C22	H16	180.0	180.1
C20	C25	C24	C23	3.9	0.6
C24	C23	C22	H15	180.0	180.1
C22	C23	C24	H16	180.0	179.9
H1	C6	C7	C3	180.2	180.0
H2	C5	C6	H1	359.7	360.0
H2	C5	C1	C2	182.0	180.0
H2	C5	C1	H3	2.0	0.0
C5	C1	H3	C2	180.0	180.0
H3	C1	C5	H2	2.0	0.0
H3	C1	C2	C3	176.2	179.9
H3	C1	C2	H4	356.2	360.0
C1	C2	H4	C3	180.0	180.0
H4	C2	C1	H3	356.2	360.0
H4	C2	C3	C4	1.6	360.0
C8	N1	H5	C9	180.0	179.7
H5	N1	C9	N2	1.4	360.0
H7	C11	C10	H6	358.5	360.0
H8	N3	C13	C18	304.7	5.2
H8	N3	C13	C14	126.9	185.4
H9	C14	C13	C18	180.2	180.3
C13	C14	H9	C15	180.0	180.0
H9	C14	C15	C16	178.0	180.0
H9	C14	C15	H10	358.0	0.0
C14	C15	H10	C16	180.0	180.0
H10	C15	C14	H9	358.0	0.0
H10	C15	C16	C17	182.8	179.7
H10	C15	C16	N4	0.1	359.9
C13	C18	H11	C17	180.0	180.0
H11	C18	C17	C16	179.7	180.0
H11	C18	C17	H12	359.7	360.0
C18	C17	H12	C16	180.0	180.0
H12	C17	C18	H11	359.7	360.0
H12	C17	C16	N4	0.7	0.1
C16	N4	H13	C19	180.0	180.1
H13	N4	C19	C20	27.1	355.5
H14	C21	C20	C25	181.8	180.2
C20	C21	H14	C22	180.0	180.1
H14	C21	C22	C23	180.2	180.0
H14	C21	C22	H15	0.2	0.0
C21	C22	H15	C23	180.0	180.0
H15	C22	C21	H14	0.2	0.0
H15	C22	C23	H16	360.0	359.9
H16	C23	C22	H15	360.0	359.9
H17	C24	C23	H16	357.9	0.1
C20	C25	H18	C24	180.0	179.7
H18	C25	C24	H17	3.9	360.0