PDB Chemical Component XU1
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for XU1
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C10 |
C9 |
1.396 |
1.379 |
C10 |
C11 |
1.419 |
1.387 |
C9 |
C7 |
1.366 |
1.394 |
C11 |
C12 |
1.402 |
1.379 |
C7 |
C8 |
1.372 |
1.410 |
C7 |
C6 |
1.485 |
1.470 |
C12 |
C8 |
1.357 |
1.391 |
O1 |
C6 |
1.241 |
1.217 |
C8 |
C1 |
1.447 |
1.474 |
C6 |
N2 |
1.318 |
1.345 |
C1 |
C2 |
1.360 |
1.395 |
C1 |
C5 |
1.371 |
1.405 |
N2 |
C5 |
1.314 |
1.382 |
C2 |
C3 |
1.352 |
1.385 |
C5 |
N1 |
1.337 |
1.327 |
C3 |
C4 |
1.387 |
1.383 |
N1 |
C4 |
1.332 |
1.317 |
C11 |
H1 |
1.080 |
1.080 |
C12 |
H2 |
1.080 |
1.080 |
C10 |
H3 |
1.080 |
1.080 |
C9 |
H4 |
1.080 |
1.081 |
N2 |
H5 |
1.001 |
0.970 |
C4 |
H6 |
1.080 |
1.081 |
C3 |
H7 |
1.080 |
1.080 |
C2 |
H8 |
1.079 |
1.080 |
Bond Angles for XU1
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C10 |
C9 |
C7 |
116.1 |
119.7 |
C9 |
C10 |
H3 |
119.6 |
119.7 |
C10 |
C9 |
H4 |
122.0 |
120.2 |
C10 |
C11 |
H1 |
119.0 |
119.7 |
C9 |
C7 |
C6 |
123.1 |
121.6 |
C7 |
C9 |
H4 |
121.9 |
120.1 |
C11 |
C12 |
C8 |
113.7 |
119.6 |
C12 |
C11 |
H1 |
119.0 |
119.7 |
C11 |
C12 |
H2 |
123.2 |
120.2 |
C7 |
C6 |
N2 |
121.3 |
120.5 |
C12 |
C8 |
C1 |
115.1 |
121.8 |
C8 |
C12 |
H2 |
123.1 |
120.1 |
O1 |
C6 |
N2 |
113.3 |
119.7 |
C8 |
C1 |
C2 |
118.2 |
121.0 |
C8 |
C1 |
C5 |
121.1 |
119.5 |
C6 |
N2 |
C5 |
123.7 |
122.4 |
C6 |
N2 |
H5 |
118.2 |
118.9 |
C5 |
C1 |
C2 |
120.7 |
119.5 |
C1 |
C2 |
C3 |
117.0 |
118.2 |
C1 |
C2 |
H8 |
121.5 |
120.9 |
C1 |
C5 |
N2 |
119.3 |
120.5 |
C1 |
C5 |
N1 |
121.8 |
119.7 |
N2 |
C5 |
N1 |
119.0 |
119.8 |
C5 |
N2 |
H5 |
118.2 |
118.7 |
C2 |
C3 |
H7 |
119.3 |
120.3 |
C5 |
N1 |
C4 |
118.6 |
121.9 |
C3 |
C4 |
H6 |
119.8 |
119.3 |
N1 |
C4 |
H6 |
119.8 |
119.2 |
Torsion Angles for XU1
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C9 |
C10 |
C11 |
H1 |
180.4 |
180.3 |
C10 |
C9 |
C7 |
C6 |
180.3 |
180.1 |
C7 |
C9 |
C10 |
H4 |
180.0 |
179.4 |
C12 |
C11 |
C10 |
H1 |
180.0 |
179.8 |
C10 |
C11 |
C12 |
H2 |
179.2 |
180.2 |
C7 |
C9 |
C10 |
H3 |
179.7 |
180.0 |
C10 |
C9 |
C7 |
H4 |
180.0 |
180.6 |
C9 |
C7 |
C6 |
N2 |
181.9 |
179.9 |
C10 |
C11 |
C12 |
H1 |
180.0 |
180.2 |
C11 |
C12 |
C8 |
C1 |
181.6 |
180.0 |
C8 |
C12 |
C11 |
H2 |
180.0 |
180.0 |
C7 |
C8 |
C12 |
H2 |
181.4 |
180.0 |
C7 |
C8 |
C1 |
C2 |
179.8 |
180.1 |
C7 |
C8 |
C1 |
C5 |
0.4 |
0.0 |
C6 |
C7 |
C9 |
H4 |
0.3 |
359.5 |
O1 |
C6 |
C7 |
N2 |
180.4 |
180.0 |
C7 |
C6 |
N2 |
C5 |
359.1 |
1.2 |
C7 |
C6 |
N2 |
H5 |
179.1 |
180.0 |
C8 |
C12 |
C11 |
H1 |
179.2 |
180.0 |
C11 |
C12 |
C8 |
H2 |
180.0 |
180.0 |
C12 |
C8 |
C1 |
C2 |
359.6 |
360.0 |
C12 |
C8 |
C1 |
C5 |
180.2 |
179.9 |
C7 |
C6 |
O1 |
N2 |
179.7 |
180.0 |
O1 |
C6 |
N2 |
C5 |
178.8 |
181.3 |
O1 |
C6 |
N2 |
H5 |
358.8 |
360.0 |
C1 |
C8 |
C12 |
H2 |
1.6 |
0.1 |
C5 |
C1 |
C8 |
C2 |
180.6 |
179.9 |
C8 |
C1 |
C2 |
C3 |
180.2 |
180.0 |
C8 |
C1 |
C2 |
H8 |
0.2 |
359.9 |
C8 |
C1 |
C5 |
N2 |
0.3 |
0.4 |
C8 |
C1 |
C5 |
N1 |
178.8 |
180.0 |
C1 |
C5 |
N2 |
C6 |
360.0 |
358.9 |
C6 |
N2 |
C5 |
N1 |
181.4 |
179.3 |
C5 |
N2 |
C6 |
H5 |
180.0 |
181.3 |
C8 |
C1 |
C2 |
C5 |
180.6 |
179.9 |
C2 |
C1 |
C5 |
N2 |
180.9 |
180.3 |
C2 |
C1 |
C5 |
N1 |
359.4 |
360.0 |
C1 |
C2 |
C3 |
H7 |
180.6 |
180.1 |
C8 |
C1 |
C5 |
C2 |
179.4 |
180.1 |
C6 |
N2 |
C5 |
C1 |
360.0 |
358.9 |
C5 |
C1 |
C2 |
C3 |
359.6 |
0.1 |
C5 |
C1 |
C2 |
H8 |
179.6 |
179.9 |
N2 |
C5 |
C1 |
N1 |
181.5 |
180.4 |
C1 |
C5 |
N2 |
H5 |
180.0 |
180.2 |
C1 |
C5 |
N1 |
C4 |
1.4 |
0.0 |
C6 |
N2 |
C5 |
H5 |
180.0 |
178.7 |
N2 |
C5 |
C1 |
C2 |
180.9 |
180.3 |
C1 |
C5 |
N2 |
N1 |
178.6 |
179.6 |
N2 |
C5 |
N1 |
C4 |
180.0 |
179.6 |
C1 |
C2 |
C3 |
H8 |
180.0 |
179.9 |
C2 |
C3 |
C4 |
H6 |
180.2 |
180.0 |
N1 |
C5 |
C1 |
C2 |
359.4 |
360.0 |
C1 |
C5 |
N1 |
N2 |
181.5 |
180.4 |
N1 |
C5 |
N2 |
H5 |
1.4 |
0.6 |
C5 |
N1 |
C4 |
H6 |
178.8 |
180.0 |
C1 |
C2 |
C3 |
C4 |
0.6 |
359.9 |
N1 |
C4 |
C3 |
H6 |
180.0 |
180.0 |
C3 |
C4 |
N1 |
H6 |
180.0 |
180.0 |
H1 |
C11 |
C12 |
C8 |
179.2 |
180.0 |
H1 |
C11 |
C12 |
H2 |
359.1 |
0.0 |
C11 |
C12 |
H2 |
C8 |
180.0 |
180.0 |
H2 |
C12 |
C11 |
H1 |
359.1 |
0.0 |
H2 |
C12 |
C8 |
C1 |
1.6 |
0.1 |
H3 |
C10 |
C9 |
C7 |
179.7 |
180.0 |
H3 |
C10 |
C9 |
H4 |
359.7 |
0.6 |
H3 |
C10 |
C11 |
H1 |
0.4 |
359.7 |
C10 |
C9 |
H4 |
C7 |
180.0 |
179.4 |
H4 |
C9 |
C10 |
H3 |
359.7 |
0.6 |
H4 |
C9 |
C7 |
C6 |
0.3 |
359.5 |
C6 |
N2 |
H5 |
C5 |
180.0 |
181.3 |
H5 |
N2 |
C5 |
N1 |
1.4 |
0.6 |
H7 |
C3 |
C4 |
H6 |
0.2 |
359.9 |
C1 |
C2 |
H8 |
C3 |
180.0 |
180.1 |
H8 |
C2 |
C3 |
H7 |
0.6 |
0.2 |