PDB Chemical Component XTV
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for XTV
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| NAO |
CAU |
1.308 |
1.337 |
| NAO |
NAP |
1.245 |
1.286 |
| CAX |
CAM |
1.508 |
1.531 |
| CAX |
CAU |
1.516 |
1.506 |
| CAX |
CAL |
1.488 |
1.530 |
| CAM |
CAL |
1.508 |
1.530 |
| CAU |
CAK |
1.346 |
1.354 |
| NAP |
NAY |
1.278 |
1.287 |
| NAY |
CAK |
1.338 |
1.353 |
| NAY |
CAN |
1.470 |
1.466 |
| CAH |
CAI |
1.390 |
1.381 |
| CAH |
CAS |
1.401 |
1.383 |
| CAN |
CAS |
1.409 |
1.507 |
| CAI |
CAV |
1.382 |
1.386 |
| CAS |
CAJ |
1.392 |
1.383 |
| CAV |
OAQ |
1.393 |
1.359 |
| CAV |
CAR |
1.419 |
1.392 |
| CAG |
CAE |
1.402 |
1.380 |
| CAG |
CAW |
1.390 |
1.387 |
| CAJ |
CAR |
1.396 |
1.385 |
| CAE |
CAD |
1.394 |
1.386 |
| OAQ |
CAW |
1.375 |
1.356 |
| CAW |
CAT |
1.406 |
1.402 |
| CAR |
OAB |
1.377 |
1.360 |
| CAD |
CAF |
1.391 |
1.378 |
| CAT |
CAF |
1.393 |
1.397 |
| CAT |
CAC |
1.438 |
1.432 |
| CAC |
NAA |
1.035 |
1.136 |
| CAF |
H1 |
1.080 |
1.080 |
| CAD |
H2 |
1.079 |
1.081 |
| CAE |
H3 |
1.079 |
1.080 |
| CAG |
H4 |
1.080 |
1.080 |
| CAJ |
H5 |
1.080 |
1.080 |
| OAB |
H6 |
0.950 |
0.967 |
| CAI |
H7 |
1.080 |
1.080 |
| CAH |
H8 |
1.080 |
1.080 |
| CAN |
H9 |
1.100 |
1.090 |
| CAN |
H10 |
1.100 |
1.090 |
| CAK |
H11 |
1.080 |
1.080 |
| CAX |
H12 |
1.100 |
1.090 |
| CAL |
H13 |
1.100 |
1.091 |
| CAL |
H14 |
1.100 |
1.089 |
| CAM |
H15 |
1.100 |
1.090 |
| CAM |
H16 |
1.100 |
1.090 |
Bond Angles for XTV
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CAL |
CAX |
CAM |
60.4 |
60.0 |
| CAX |
CAM |
CAL |
59.1 |
60.0 |
| CAM |
CAX |
H12 |
116.0 |
117.5 |
| CAX |
CAM |
H15 |
120.2 |
117.5 |
| CAX |
CAM |
H16 |
120.2 |
117.5 |
| CAL |
CAX |
H12 |
116.3 |
117.5 |
| CAX |
CAL |
H13 |
119.9 |
117.5 |
| CAX |
CAL |
H14 |
119.9 |
117.6 |
| CAM |
CAL |
H13 |
119.9 |
117.4 |
| CAM |
CAL |
H14 |
119.9 |
117.5 |
| CAU |
CAK |
H11 |
128.5 |
127.0 |
| NAY |
CAK |
H11 |
128.5 |
126.9 |
| NAY |
CAN |
H9 |
109.0 |
109.4 |
| NAY |
CAN |
H10 |
109.0 |
109.4 |
| CAH |
CAI |
H7 |
118.9 |
120.0 |
| CAS |
CAH |
H8 |
120.5 |
119.9 |
| CAS |
CAJ |
H5 |
118.5 |
120.0 |
| CAV |
CAR |
OAB |
119.9 |
120.1 |
| CAG |
CAE |
H3 |
117.1 |
119.8 |
| CAW |
CAG |
H4 |
121.7 |
119.9 |
| CAJ |
CAR |
OAB |
122.5 |
120.1 |
| CAE |
CAD |
H2 |
122.1 |
119.8 |
| CAR |
OAB |
H6 |
109.5 |
114.0 |
| CAD |
CAF |
H1 |
119.8 |
120.0 |
| CAT |
CAF |
H1 |
119.8 |
120.1 |
| H9 |
CAN |
H10 |
109.5 |
109.5 |
| H13 |
CAL |
H14 |
109.5 |
115.6 |
| H15 |
CAM |
H16 |
109.5 |
115.5 |
Torsion Angles for XTV
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| NAO |
CAU |
CAK |
H11 |
180.8 |
179.6 |
| CAL |
CAX |
CAM |
H12 |
106.9 |
107.4 |
| CAM |
CAX |
CAL |
H13 |
109.6 |
107.4 |
| CAM |
CAX |
CAL |
H14 |
250.4 |
252.5 |
| CAX |
CAM |
CAL |
H13 |
250.4 |
252.5 |
| CAX |
CAM |
CAL |
H14 |
109.6 |
107.6 |
| H15 |
CAM |
CAX |
H16 |
218.5 |
215.0 |
| CAX |
CAU |
CAK |
H11 |
2.3 |
360.0 |
| CAL |
CAX |
CAM |
CAL |
-0.0 |
-0.0 |
| CAM |
CAX |
CAL |
H12 |
253.7 |
252.5 |
| CAL |
CAX |
CAM |
H15 |
109.2 |
107.5 |
| CAL |
CAX |
CAM |
H16 |
250.8 |
252.4 |
| CAM |
CAL |
CAX |
H13 |
250.4 |
252.6 |
| CAM |
CAL |
CAX |
H14 |
109.6 |
107.5 |
| H13 |
CAL |
CAX |
H14 |
219.2 |
214.9 |
| CAL |
CAM |
CAX |
H12 |
253.1 |
252.6 |
| CAX |
CAM |
CAL |
H15 |
109.2 |
107.5 |
| CAX |
CAM |
CAL |
H16 |
250.7 |
252.5 |
| CAM |
CAL |
CAX |
H12 |
106.3 |
107.5 |
| CAX |
CAL |
CAM |
H13 |
109.6 |
107.5 |
| CAX |
CAL |
CAM |
H14 |
250.4 |
252.4 |
| H13 |
CAL |
CAM |
H14 |
140.8 |
144.9 |
| NAY |
CAK |
CAU |
H11 |
180.0 |
180.0 |
| NAP |
NAY |
CAK |
H11 |
180.5 |
180.3 |
| NAP |
NAY |
CAN |
H9 |
7.5 |
184.7 |
| NAP |
NAY |
CAN |
H10 |
127.0 |
64.7 |
| CAU |
CAK |
NAY |
H11 |
180.0 |
180.0 |
| CAK |
NAY |
CAN |
H9 |
185.8 |
4.9 |
| CAK |
NAY |
CAN |
H10 |
305.3 |
244.9 |
| H9 |
CAN |
NAY |
H10 |
240.5 |
120.0 |
| CAS |
CAH |
CAI |
H7 |
175.8 |
180.0 |
| CAH |
CAS |
CAJ |
H5 |
179.2 |
179.7 |
| CAN |
CAS |
CAH |
H8 |
359.3 |
360.0 |
| CAN |
CAS |
CAJ |
H5 |
3.4 |
0.1 |
| CAJ |
CAR |
CAV |
OAB |
184.3 |
180.0 |
| CAV |
CAR |
OAB |
H6 |
180.0 |
89.9 |
| CAG |
CAE |
CAD |
H2 |
184.0 |
180.0 |
| CAW |
CAG |
CAE |
H3 |
174.1 |
179.8 |
| CAV |
CAR |
CAJ |
OAB |
175.6 |
180.0 |
| CAJ |
CAR |
OAB |
H6 |
355.5 |
269.9 |
| CAE |
CAD |
CAF |
H1 |
179.3 |
180.1 |
| OAQ |
CAW |
CAG |
H4 |
1.5 |
359.8 |
| CAW |
CAT |
CAF |
H1 |
179.8 |
180.2 |
| CAT |
CAF |
CAD |
H1 |
180.0 |
180.0 |
| CAD |
CAF |
CAT |
H1 |
180.0 |
180.0 |
| H2 |
CAD |
CAF |
H1 |
359.3 |
0.0 |
| H3 |
CAE |
CAD |
H2 |
4.0 |
0.0 |
| H4 |
CAG |
CAE |
H3 |
354.1 |
360.0 |
| H5 |
CAJ |
CAR |
OAB |
3.0 |
0.0 |
| H8 |
CAH |
CAI |
H7 |
355.8 |
360.0 |
| NAY |
CAN |
H9 |
H10 |
119.2 |
240.1 |
| NAY |
CAN |
H10 |
H9 |
240.8 |
120.0 |
| CAL |
CAX |
H12 |
CAM |
291.8 |
291.4 |
| H12 |
CAX |
CAM |
CAL |
253.1 |
252.6 |
| H12 |
CAX |
CAM |
H15 |
2.3 |
0.0 |
| H12 |
CAX |
CAM |
H16 |
143.9 |
145.0 |
| H12 |
CAX |
CAL |
H13 |
215.9 |
214.9 |
| H12 |
CAX |
CAL |
H14 |
356.7 |
0.0 |
| H13 |
CAL |
CAX |
CAM |
109.6 |
107.4 |
| H13 |
CAL |
CAX |
H12 |
215.9 |
214.9 |
| CAX |
CAL |
H13 |
H14 |
144.5 |
145.8 |
| CAM |
CAL |
H13 |
H14 |
215.5 |
214.4 |
| H14 |
CAL |
CAX |
CAM |
250.4 |
252.5 |
| H14 |
CAL |
CAX |
H12 |
356.7 |
0.0 |
| CAX |
CAL |
H14 |
H13 |
215.5 |
214.2 |
| CAM |
CAL |
H14 |
H13 |
144.5 |
145.6 |
| CAX |
CAM |
H15 |
CAL |
290.4 |
291.4 |
| H15 |
CAM |
CAX |
H12 |
2.3 |
0.0 |
| CAX |
CAM |
H15 |
H16 |
145.2 |
145.6 |
| H15 |
CAM |
CAL |
H13 |
141.2 |
145.0 |
| H15 |
CAM |
CAL |
H14 |
0.4 |
0.1 |
| CAX |
CAM |
H16 |
CAL |
69.6 |
68.7 |
| H16 |
CAM |
CAX |
H12 |
143.9 |
145.0 |
| CAX |
CAM |
H16 |
H15 |
214.8 |
214.4 |
| H16 |
CAM |
CAL |
H13 |
359.7 |
360.0 |
| H16 |
CAM |
CAL |
H14 |
218.9 |
215.0 |