PDB Chemical Component XQK
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for XQK
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C1 |
C5 |
1.323 |
1.410 |
| C1 |
NAF |
1.330 |
1.302 |
| C4 |
C5 |
1.328 |
1.371 |
| C4 |
C6 |
1.390 |
1.471 |
| C4 |
O3 |
1.233 |
1.347 |
| C6 |
C10 |
1.378 |
1.397 |
| C6 |
N7 |
1.339 |
1.360 |
| C9 |
C10 |
1.376 |
1.410 |
| C9 |
C15 |
1.529 |
1.507 |
| C9 |
N8 |
1.334 |
1.305 |
| C10 |
C11 |
1.530 |
1.471 |
| C11 |
O14 |
1.250 |
1.215 |
| C11 |
O12 |
1.360 |
1.347 |
| C13 |
O12 |
1.430 |
1.452 |
| N8 |
N7 |
1.242 |
1.399 |
| O3 |
NAF |
1.235 |
1.209 |
| C1 |
H1 |
1.080 |
1.080 |
| C5 |
H5 |
1.080 |
1.080 |
| N7 |
H7 |
0.999 |
0.970 |
| C15 |
H151 |
1.100 |
1.090 |
| C15 |
H152 |
1.100 |
1.090 |
| C15 |
H153 |
1.100 |
1.091 |
| C13 |
H131 |
1.100 |
1.090 |
| C13 |
H132 |
1.101 |
1.089 |
| C13 |
H133 |
1.099 |
1.090 |
Bond Angles for XQK
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C5 |
C1 |
NAF |
105.7 |
106.6 |
| C1 |
C5 |
C4 |
104.9 |
103.9 |
| C5 |
C1 |
H1 |
127.1 |
126.7 |
| C1 |
C5 |
H5 |
127.5 |
128.1 |
| NAF |
C1 |
H1 |
127.1 |
126.7 |
| C5 |
C4 |
C6 |
128.0 |
127.0 |
| C5 |
C4 |
O3 |
109.9 |
106.1 |
| C4 |
C5 |
H5 |
127.6 |
128.1 |
| C6 |
C4 |
O3 |
122.1 |
127.0 |
| C4 |
C6 |
C10 |
123.6 |
126.6 |
| C4 |
C6 |
N7 |
129.6 |
126.5 |
| C4 |
O3 |
NAF |
110.3 |
111.4 |
| C10 |
C6 |
N7 |
106.8 |
106.9 |
| C6 |
C10 |
C9 |
104.5 |
107.0 |
| C6 |
C10 |
C11 |
127.7 |
126.5 |
| C6 |
N7 |
N8 |
111.0 |
108.3 |
| C6 |
N7 |
H7 |
124.5 |
125.8 |
| C10 |
C9 |
C15 |
126.2 |
125.7 |
| C10 |
C9 |
N8 |
107.6 |
108.5 |
| C9 |
C10 |
C11 |
127.7 |
126.5 |
| C15 |
C9 |
N8 |
126.2 |
125.8 |
| C9 |
C15 |
H151 |
109.5 |
109.5 |
| C9 |
C15 |
H152 |
109.5 |
109.5 |
| C9 |
C15 |
H153 |
109.5 |
109.5 |
| C9 |
N8 |
N7 |
110.0 |
109.3 |
| C10 |
C11 |
O14 |
120.0 |
120.0 |
| C10 |
C11 |
O12 |
120.0 |
120.0 |
| O14 |
C11 |
O12 |
120.0 |
120.0 |
| C11 |
O12 |
C13 |
109.5 |
117.0 |
| O12 |
C13 |
H131 |
109.5 |
109.5 |
| O12 |
C13 |
H132 |
109.5 |
109.4 |
| O12 |
C13 |
H133 |
109.5 |
109.4 |
| N8 |
N7 |
H7 |
124.5 |
125.9 |
| H151 |
C15 |
H152 |
109.4 |
109.4 |
| H151 |
C15 |
H153 |
109.4 |
109.5 |
| H152 |
C15 |
H153 |
109.5 |
109.4 |
| H131 |
C13 |
H132 |
109.5 |
109.6 |
| H131 |
C13 |
H133 |
109.5 |
109.5 |
| H132 |
C13 |
H133 |
109.5 |
109.4 |
Torsion Angles for XQK
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| NAF |
C1 |
C5 |
H1 |
180.0 |
180.3 |
| C1 |
C5 |
C4 |
C6 |
180.0 |
180.1 |
| C1 |
C5 |
C4 |
O3 |
0.0 |
360.0 |
| C4 |
C5 |
C1 |
H5 |
180.0 |
180.0 |
| NAF |
C1 |
C5 |
C4 |
0.0 |
0.0 |
| C5 |
C1 |
NAF |
H1 |
180.0 |
179.7 |
| NAF |
C1 |
C5 |
H5 |
180.0 |
180.0 |
| C4 |
O3 |
NAF |
C1 |
0.0 |
360.0 |
| C4 |
C5 |
C1 |
NAF |
0.0 |
0.0 |
| C4 |
C5 |
C1 |
H1 |
180.0 |
179.7 |
| C1 |
C5 |
C4 |
H5 |
180.0 |
180.0 |
| C6 |
C4 |
C5 |
O3 |
180.0 |
180.1 |
| C5 |
C4 |
C6 |
C10 |
12.2 |
135.0 |
| C5 |
C4 |
C6 |
N7 |
192.2 |
314.6 |
| C5 |
C4 |
O3 |
NAF |
360.0 |
0.0 |
| C5 |
C4 |
C6 |
O3 |
180.0 |
179.9 |
| C6 |
C4 |
C5 |
H5 |
360.0 |
0.1 |
| C6 |
C4 |
O3 |
NAF |
180.0 |
179.9 |
| C10 |
C6 |
C4 |
N7 |
180.0 |
180.4 |
| C4 |
C6 |
C10 |
C9 |
180.0 |
179.9 |
| C4 |
C6 |
C10 |
C11 |
0.1 |
359.8 |
| C4 |
C6 |
N7 |
N8 |
180.0 |
180.1 |
| C4 |
C6 |
N7 |
H7 |
360.0 |
0.1 |
| C5 |
C4 |
O3 |
C6 |
180.0 |
180.1 |
| O3 |
C4 |
C5 |
H5 |
180.0 |
179.9 |
| O3 |
C4 |
C6 |
C10 |
192.2 |
315.2 |
| O3 |
C4 |
C6 |
N7 |
12.2 |
134.7 |
| C10 |
C6 |
C4 |
O3 |
192.2 |
315.2 |
| C4 |
C6 |
C10 |
N7 |
180.0 |
179.6 |
| C10 |
C6 |
N7 |
N8 |
0.0 |
359.7 |
| C10 |
C6 |
N7 |
H7 |
180.0 |
179.7 |
| C6 |
C10 |
C9 |
C15 |
180.0 |
180.0 |
| C6 |
C10 |
C9 |
N8 |
0.1 |
359.8 |
| C9 |
C10 |
C6 |
C11 |
179.9 |
180.1 |
| C6 |
C10 |
C11 |
O14 |
30.5 |
90.1 |
| C6 |
C10 |
C11 |
O12 |
210.5 |
270.1 |
| N7 |
C6 |
C4 |
O3 |
12.2 |
134.7 |
| C4 |
C6 |
N7 |
C10 |
180.0 |
180.4 |
| N7 |
C6 |
C10 |
C9 |
359.9 |
0.3 |
| N7 |
C6 |
C10 |
C11 |
180.0 |
180.2 |
| C9 |
N8 |
N7 |
C6 |
0.0 |
0.1 |
| N8 |
N7 |
C6 |
H7 |
180.0 |
180.0 |
| C9 |
C10 |
C6 |
N7 |
359.9 |
0.3 |
| C6 |
C10 |
C9 |
C11 |
180.1 |
179.9 |
| C15 |
C9 |
C10 |
N8 |
179.9 |
180.2 |
| C10 |
C9 |
C15 |
H151 |
180.1 |
90.0 |
| C10 |
C9 |
C15 |
H152 |
300.1 |
210.0 |
| C10 |
C9 |
C15 |
H153 |
60.1 |
329.9 |
| C10 |
C9 |
N8 |
N7 |
359.9 |
0.0 |
| C9 |
C10 |
C11 |
O14 |
210.6 |
269.9 |
| C9 |
C10 |
C11 |
O12 |
30.6 |
90.0 |
| C10 |
C9 |
C15 |
N8 |
180.1 |
179.8 |
| C15 |
C9 |
C10 |
C11 |
359.9 |
0.1 |
| C15 |
C9 |
N8 |
N7 |
180.0 |
179.8 |
| H151 |
C15 |
C9 |
H152 |
240.0 |
240.0 |
| H151 |
C15 |
C9 |
H153 |
120.0 |
120.0 |
| H152 |
C15 |
C9 |
H153 |
240.0 |
240.0 |
| C6 |
N7 |
N8 |
C9 |
0.0 |
0.1 |
| C10 |
C9 |
N8 |
C15 |
179.9 |
180.2 |
| N8 |
C9 |
C10 |
C11 |
180.0 |
179.9 |
| N8 |
C9 |
C15 |
H151 |
0.0 |
270.2 |
| N8 |
C9 |
C15 |
H152 |
120.0 |
30.2 |
| N8 |
C9 |
C15 |
H153 |
240.0 |
150.2 |
| C9 |
N8 |
N7 |
H7 |
180.0 |
180.1 |
| C11 |
C10 |
C6 |
N7 |
180.0 |
180.2 |
| C6 |
C10 |
C11 |
C9 |
179.9 |
180.1 |
| C11 |
C10 |
C9 |
C15 |
359.9 |
0.1 |
| C11 |
C10 |
C9 |
N8 |
180.0 |
179.9 |
| O14 |
C11 |
C10 |
O12 |
180.0 |
180.0 |
| C10 |
C11 |
O12 |
C13 |
218.5 |
180.0 |
| C10 |
C11 |
O14 |
O12 |
180.0 |
180.0 |
| O14 |
C11 |
O12 |
C13 |
38.6 |
0.0 |
| C10 |
C11 |
O12 |
O14 |
180.0 |
180.0 |
| C11 |
O12 |
C13 |
H131 |
180.0 |
180.0 |
| C11 |
O12 |
C13 |
H132 |
300.0 |
300.0 |
| C11 |
O12 |
C13 |
H133 |
60.0 |
59.9 |
| H131 |
C13 |
O12 |
H132 |
240.0 |
239.9 |
| H131 |
C13 |
O12 |
H133 |
120.0 |
120.0 |
| H132 |
C13 |
O12 |
H133 |
240.0 |
240.1 |
| C6 |
N7 |
N8 |
H7 |
180.0 |
180.0 |
| O3 |
NAF |
C1 |
H1 |
180.0 |
180.3 |
| C5 |
C1 |
H1 |
NAF |
180.0 |
180.3 |
| H1 |
C1 |
C5 |
C4 |
180.0 |
179.7 |
| H1 |
C1 |
C5 |
H5 |
0.0 |
359.8 |
| H5 |
C5 |
C1 |
NAF |
180.0 |
180.0 |
| C1 |
C5 |
H5 |
C4 |
180.0 |
180.0 |
| H5 |
C5 |
C1 |
H1 |
0.0 |
359.8 |
| H5 |
C5 |
C4 |
C6 |
360.0 |
0.1 |
| H5 |
C5 |
C4 |
O3 |
180.0 |
179.9 |
| C6 |
N7 |
H7 |
N8 |
180.0 |
180.0 |
| H151 |
C15 |
C9 |
N8 |
0.0 |
270.2 |
| C9 |
C15 |
H151 |
H152 |
120.0 |
120.0 |
| C9 |
C15 |
H151 |
H153 |
240.0 |
240.0 |
| H152 |
C15 |
H151 |
H153 |
120.0 |
119.9 |
| H152 |
C15 |
C9 |
N8 |
120.0 |
30.2 |
| C9 |
C15 |
H152 |
H151 |
240.0 |
239.9 |
| C9 |
C15 |
H152 |
H153 |
120.0 |
120.0 |
| H151 |
C15 |
H152 |
H153 |
240.1 |
240.1 |
| H153 |
C15 |
C9 |
N8 |
240.0 |
150.2 |
| C9 |
C15 |
H153 |
H151 |
120.0 |
120.1 |
| C9 |
C15 |
H153 |
H152 |
240.0 |
240.0 |
| H151 |
C15 |
H153 |
H152 |
120.0 |
119.9 |
| O12 |
C13 |
H131 |
H132 |
120.0 |
120.0 |
| O12 |
C13 |
H131 |
H133 |
240.0 |
240.0 |
| H132 |
C13 |
H131 |
H133 |
120.0 |
120.0 |
| O12 |
C13 |
H132 |
H131 |
240.0 |
240.0 |
| O12 |
C13 |
H132 |
H133 |
120.0 |
119.9 |
| H131 |
C13 |
H132 |
H133 |
240.0 |
239.9 |
| O12 |
C13 |
H133 |
H131 |
120.0 |
120.0 |
| O12 |
C13 |
H133 |
H132 |
240.0 |
240.1 |
| H131 |
C13 |
H133 |
H132 |
120.0 |
120.1 |