PDB Chemical Component XG1
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for XG1
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| NAR |
CAG |
1.346 |
1.381 |
| CAG |
NAI |
1.344 |
1.309 |
| CAG |
CAH |
1.459 |
1.464 |
| NAI |
CAA |
1.360 |
1.353 |
| CAQ |
CAP |
1.522 |
1.531 |
| CAH |
NAK |
1.335 |
1.311 |
| CAH |
CAJ |
1.457 |
1.474 |
| CAC |
CAA |
1.389 |
1.402 |
| CAC |
CAE |
1.387 |
1.374 |
| CAA |
CAB |
1.394 |
1.413 |
| NAK |
NAL |
1.410 |
1.286 |
| CAP |
CAO |
1.529 |
1.530 |
| CAE |
CAF |
1.381 |
1.388 |
| CAJ |
CAB |
1.387 |
1.468 |
| CAJ |
CAM |
1.410 |
1.368 |
| CAB |
CAD |
1.378 |
1.392 |
| NAL |
CAN |
1.466 |
1.465 |
| NAL |
CAM |
1.335 |
1.348 |
| CAO |
CAN |
1.523 |
1.531 |
| CAF |
CAD |
1.392 |
1.378 |
| NAR |
H1 |
1.000 |
0.970 |
| NAR |
H2 |
1.000 |
0.970 |
| CAC |
H3 |
1.080 |
1.080 |
| CAE |
H4 |
1.080 |
1.079 |
| CAF |
H5 |
1.080 |
1.080 |
| CAD |
H6 |
1.080 |
1.080 |
| CAM |
H7 |
1.081 |
1.080 |
| CAN |
H8 |
1.100 |
1.090 |
| CAN |
H9 |
1.100 |
1.090 |
| CAO |
H10 |
1.100 |
1.090 |
| CAO |
H11 |
1.100 |
1.091 |
| CAP |
H12 |
1.100 |
1.090 |
| CAP |
H13 |
1.100 |
1.090 |
| CAQ |
H14 |
1.100 |
1.089 |
| CAQ |
H15 |
1.100 |
1.090 |
| CAQ |
H16 |
1.100 |
1.090 |
Bond Angles for XG1
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| NAR |
CAG |
NAI |
124.3 |
119.7 |
| NAR |
CAG |
CAH |
118.2 |
119.6 |
| CAG |
NAR |
H1 |
109.5 |
120.0 |
| CAG |
NAR |
H2 |
109.5 |
120.0 |
| NAI |
CAG |
CAH |
117.5 |
120.7 |
| CAG |
NAI |
CAA |
124.5 |
124.3 |
| CAG |
CAH |
NAK |
135.8 |
136.6 |
| CAG |
CAH |
CAJ |
117.6 |
117.6 |
| NAI |
CAA |
CAB |
121.4 |
121.4 |
| CAQ |
CAP |
H12 |
108.3 |
109.4 |
| CAQ |
CAP |
H13 |
108.3 |
109.4 |
| CAH |
NAK |
NAL |
107.4 |
110.8 |
| CAC |
CAA |
CAB |
119.9 |
118.8 |
| CAC |
CAE |
CAF |
118.6 |
120.7 |
| CAE |
CAC |
H3 |
119.6 |
120.0 |
| CAC |
CAE |
H4 |
120.7 |
119.7 |
| CAA |
CAB |
CAD |
119.8 |
120.1 |
| NAK |
NAL |
CAN |
115.0 |
124.2 |
| CAP |
CAO |
H10 |
108.2 |
109.5 |
| CAP |
CAO |
H11 |
108.2 |
109.5 |
| CAE |
CAF |
CAD |
121.4 |
120.3 |
| CAF |
CAE |
H4 |
120.7 |
119.6 |
| CAE |
CAF |
H5 |
119.3 |
119.9 |
| CAJ |
CAM |
H7 |
127.6 |
126.6 |
| CAB |
CAD |
H6 |
120.2 |
120.1 |
| NAL |
CAN |
H8 |
110.1 |
109.5 |
| NAL |
CAN |
H9 |
110.1 |
109.5 |
| NAL |
CAM |
H7 |
127.6 |
126.6 |
| CAO |
CAN |
H8 |
110.1 |
109.5 |
| CAO |
CAN |
H9 |
110.1 |
109.5 |
| CAD |
CAF |
H5 |
119.3 |
119.8 |
| CAF |
CAD |
H6 |
120.2 |
120.0 |
| H1 |
NAR |
H2 |
109.4 |
120.0 |
| H8 |
CAN |
H9 |
109.5 |
109.5 |
| H10 |
CAO |
H11 |
109.5 |
109.5 |
| H12 |
CAP |
H13 |
109.5 |
109.5 |
| H14 |
CAQ |
H15 |
109.5 |
109.5 |
| H14 |
CAQ |
H16 |
109.5 |
109.4 |
| H15 |
CAQ |
H16 |
109.5 |
109.5 |
Torsion Angles for XG1
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| NAI |
CAG |
NAR |
CAH |
178.8 |
180.3 |
| NAR |
CAG |
NAI |
CAA |
183.2 |
180.0 |
| NAR |
CAG |
CAH |
NAK |
1.3 |
0.0 |
| NAR |
CAG |
CAH |
CAJ |
179.9 |
179.8 |
| H1 |
NAR |
CAG |
H2 |
240.0 |
180.3 |
| NAR |
CAG |
NAI |
CAH |
181.2 |
179.7 |
| NAI |
CAG |
NAR |
H1 |
360.0 |
360.0 |
| NAI |
CAG |
NAR |
H2 |
120.0 |
179.7 |
| NAI |
CAG |
CAH |
NAK |
182.4 |
179.7 |
| NAI |
CAG |
CAH |
CAJ |
1.0 |
359.5 |
| CAG |
NAI |
CAA |
CAB |
355.6 |
360.0 |
| NAR |
CAG |
CAH |
NAI |
178.9 |
180.3 |
| CAH |
CAG |
NAR |
H1 |
181.2 |
179.7 |
| CAH |
CAG |
NAR |
H2 |
301.1 |
359.4 |
| CAH |
CAG |
NAI |
CAA |
2.0 |
0.3 |
| CAG |
CAH |
NAK |
NAL |
180.6 |
179.2 |
| CAA |
NAI |
CAG |
CAH |
2.0 |
0.3 |
| CAC |
CAA |
NAI |
CAB |
185.0 |
180.0 |
| NAI |
CAA |
CAB |
CAD |
182.3 |
180.0 |
| CAQ |
CAP |
CAO |
H10 |
326.1 |
60.0 |
| CAQ |
CAP |
CAO |
H11 |
84.6 |
300.0 |
| H12 |
CAP |
CAQ |
H13 |
241.3 |
120.0 |
| CAG |
CAH |
NAK |
CAJ |
178.7 |
179.8 |
| CAH |
NAK |
NAL |
CAN |
178.8 |
180.0 |
| CAG |
CAH |
CAJ |
NAK |
181.0 |
180.2 |
| CAH |
CAJ |
CAM |
H7 |
179.9 |
180.3 |
| NAI |
CAA |
CAC |
CAB |
175.1 |
180.0 |
| CAC |
CAA |
CAB |
CAD |
357.2 |
360.0 |
| CAE |
CAC |
CAA |
CAB |
2.2 |
0.0 |
| CAC |
CAE |
CAF |
CAD |
357.5 |
0.1 |
| CAF |
CAE |
CAC |
H4 |
180.0 |
180.0 |
| CAC |
CAE |
CAF |
H5 |
177.5 |
180.0 |
| CAA |
CAB |
CAD |
H6 |
180.7 |
180.0 |
| NAK |
NAL |
CAN |
H8 |
239.1 |
65.0 |
| NAK |
NAL |
CAN |
H9 |
359.9 |
185.0 |
| NAK |
NAL |
CAM |
H7 |
181.3 |
179.4 |
| CAP |
CAO |
CAN |
H8 |
212.1 |
60.0 |
| CAP |
CAO |
CAN |
H9 |
91.3 |
300.0 |
| H10 |
CAO |
CAP |
H11 |
241.4 |
120.0 |
| CAF |
CAE |
CAC |
H3 |
180.4 |
180.0 |
| CAC |
CAE |
CAF |
H4 |
180.0 |
180.0 |
| CAD |
CAF |
CAE |
H5 |
180.0 |
180.1 |
| CAE |
CAF |
CAD |
H6 |
181.9 |
179.9 |
| CAG |
CAH |
CAJ |
CAB |
358.3 |
0.5 |
| CAJ |
CAB |
CAD |
H6 |
359.6 |
0.0 |
| CAG |
CAH |
CAJ |
CAM |
179.9 |
180.3 |
| NAL |
CAM |
CAJ |
H7 |
180.0 |
180.0 |
| CAB |
CAD |
CAF |
H5 |
181.9 |
180.0 |
| CAF |
CAD |
CAB |
H6 |
180.0 |
180.0 |
| CAN |
NAL |
CAM |
H7 |
0.2 |
0.1 |
| CAO |
CAN |
NAL |
H8 |
240.4 |
240.0 |
| CAO |
CAN |
NAL |
H9 |
119.6 |
120.0 |
| H8 |
CAN |
NAL |
H9 |
239.2 |
240.0 |
| CAJ |
CAM |
NAL |
H7 |
180.0 |
180.0 |
| NAL |
CAN |
CAO |
H8 |
119.6 |
120.0 |
| NAL |
CAN |
CAO |
H9 |
240.4 |
240.0 |
| H8 |
CAN |
CAO |
H9 |
120.8 |
120.0 |
| CAA |
CAB |
CAD |
CAF |
0.7 |
0.1 |
| CAD |
CAF |
CAE |
H4 |
177.5 |
180.1 |
| CAE |
CAF |
CAD |
H5 |
180.0 |
179.9 |
| CAB |
CAD |
CAF |
H6 |
180.0 |
180.0 |
| H1 |
NAR |
CAG |
NAI |
360.0 |
360.0 |
| H1 |
NAR |
CAG |
CAH |
181.2 |
179.7 |
| CAG |
NAR |
H1 |
H2 |
120.0 |
179.7 |
| H2 |
NAR |
CAG |
NAI |
120.0 |
179.7 |
| H2 |
NAR |
CAG |
CAH |
301.1 |
359.4 |
| CAG |
NAR |
H2 |
H1 |
240.0 |
180.3 |
| H3 |
CAC |
CAA |
CAB |
182.2 |
180.0 |
| H3 |
CAC |
CAE |
CAF |
180.4 |
180.0 |
| H3 |
CAC |
CAE |
H4 |
0.4 |
0.0 |
| CAC |
CAE |
H4 |
CAF |
180.0 |
180.0 |
| H4 |
CAE |
CAC |
H3 |
0.4 |
0.0 |
| H4 |
CAE |
CAF |
CAD |
177.5 |
180.1 |
| H4 |
CAE |
CAF |
H5 |
357.5 |
360.0 |
| CAE |
CAF |
H5 |
CAD |
180.0 |
180.1 |
| H5 |
CAF |
CAE |
H4 |
357.5 |
360.0 |
| H5 |
CAF |
CAD |
H6 |
1.9 |
0.0 |
| H6 |
CAD |
CAF |
H5 |
1.9 |
0.0 |
| NAL |
CAN |
H8 |
H9 |
121.2 |
120.0 |
| CAO |
CAN |
H8 |
H9 |
238.8 |
240.0 |
| NAL |
CAN |
H9 |
H8 |
238.8 |
240.0 |
| CAO |
CAN |
H9 |
H8 |
121.2 |
120.0 |
| CAP |
CAO |
H10 |
H11 |
117.7 |
240.0 |
| H10 |
CAO |
CAN |
H8 |
91.3 |
180.0 |
| H10 |
CAO |
CAN |
H9 |
330.5 |
60.0 |
| CAP |
CAO |
H11 |
H10 |
242.3 |
120.0 |
| H11 |
CAO |
CAN |
H8 |
332.8 |
300.0 |
| H11 |
CAO |
CAN |
H9 |
212.0 |
180.0 |
| CAQ |
CAP |
H12 |
H13 |
118.0 |
240.1 |
| H12 |
CAP |
CAO |
H10 |
205.4 |
180.0 |
| H12 |
CAP |
CAO |
H11 |
324.0 |
60.0 |
| CAQ |
CAP |
H13 |
H12 |
242.1 |
119.9 |
| H13 |
CAP |
CAO |
H10 |
86.8 |
300.1 |
| H13 |
CAP |
CAO |
H11 |
205.3 |
180.1 |
| H14 |
CAQ |
CAP |
H12 |
300.7 |
60.0 |
| H14 |
CAQ |
CAP |
H13 |
59.4 |
300.0 |
| H15 |
CAQ |
H14 |
H16 |
120.0 |
120.0 |
| H15 |
CAQ |
CAP |
H12 |
60.7 |
180.0 |
| H15 |
CAQ |
CAP |
H13 |
179.4 |
60.0 |
| H14 |
CAQ |
H15 |
H16 |
240.0 |
240.0 |
| H16 |
CAQ |
CAP |
H12 |
180.7 |
300.0 |
| H16 |
CAQ |
CAP |
H13 |
299.4 |
180.0 |
| H14 |
CAQ |
H16 |
H15 |
120.0 |
120.0 |