PDB Chemical Component XFW
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for XFW
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| NE2 |
CD |
1.492 |
1.469 |
| O |
C |
1.227 |
1.208 |
| C |
CA |
1.532 |
1.507 |
| CD |
NE1 |
1.483 |
1.469 |
| CD |
CG |
1.546 |
1.529 |
| CA |
CB |
1.532 |
1.530 |
| CA |
N |
1.479 |
1.468 |
| CG |
CB |
1.533 |
1.530 |
| CA |
HA |
1.100 |
1.090 |
| CB |
HB2 |
1.100 |
1.090 |
| CB |
HB3 |
1.101 |
1.090 |
| CG |
HG2 |
1.099 |
1.090 |
| CG |
HG3 |
1.100 |
1.090 |
| CD |
HD2 |
1.100 |
1.090 |
| NE1 |
HE12 |
1.000 |
1.009 |
| NE1 |
HE13 |
1.000 |
1.009 |
| NE2 |
HE22 |
1.000 |
1.009 |
| NE2 |
HE23 |
1.000 |
1.009 |
| N |
H |
1.000 |
1.009 |
| C |
OXT |
1.355 |
1.343 |
| OXT |
HXT |
0.950 |
0.966 |
| N |
H2 |
1.000 |
1.009 |
Bond Angles for XFW
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| NE2 |
CD |
HD2 |
105.7 |
109.5 |
| O |
C |
CA |
119.3 |
120.0 |
| O |
C |
OXT |
125.4 |
120.0 |
| C |
CA |
CB |
109.0 |
109.4 |
| C |
CA |
N |
111.0 |
109.4 |
| C |
CA |
HA |
108.5 |
109.5 |
| CA |
C |
OXT |
115.3 |
120.0 |
| NE1 |
CD |
HD2 |
105.8 |
109.5 |
| CD |
NE1 |
HE12 |
109.5 |
111.0 |
| CD |
NE1 |
HE13 |
109.5 |
111.0 |
| CD |
CG |
HG2 |
109.3 |
109.5 |
| CD |
CG |
HG3 |
109.3 |
109.5 |
| CB |
CA |
N |
110.5 |
109.5 |
| CB |
CA |
HA |
108.5 |
109.5 |
| CA |
CB |
HB2 |
109.5 |
109.5 |
| CA |
CB |
HB3 |
109.4 |
109.4 |
| N |
CA |
HA |
109.2 |
109.5 |
| CA |
N |
H |
109.5 |
111.0 |
| CA |
N |
H2 |
109.5 |
111.0 |
| CG |
CB |
HB2 |
109.5 |
109.5 |
| CG |
CB |
HB3 |
109.5 |
109.4 |
| HB2 |
CB |
HB3 |
109.5 |
109.5 |
| HG2 |
CG |
HG3 |
109.5 |
109.4 |
| HE12 |
NE1 |
HE13 |
109.5 |
111.0 |
| HE22 |
NE2 |
HE23 |
109.5 |
111.0 |
| H |
N |
H2 |
109.5 |
111.0 |
| C |
OXT |
HXT |
109.5 |
117.0 |
Torsion Angles for XFW
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| NE1 |
CD |
NE2 |
HD2 |
114.8 |
240.0 |
| NE2 |
CD |
NE1 |
HE12 |
180.0 |
296.0 |
| NE2 |
CD |
NE1 |
HE13 |
300.0 |
60.0 |
| NE2 |
CD |
CG |
HG2 |
232.5 |
179.9 |
| NE2 |
CD |
CG |
HG3 |
352.3 |
60.0 |
| O |
C |
CA |
CB |
69.9 |
99.7 |
| O |
C |
CA |
N |
308.0 |
339.7 |
| O |
C |
CA |
HA |
187.9 |
219.7 |
| CA |
C |
O |
OXT |
178.7 |
180.3 |
| O |
C |
OXT |
HXT |
0.0 |
0.3 |
| O |
C |
CA |
OXT |
181.2 |
179.7 |
| CB |
CA |
C |
N |
121.9 |
120.0 |
| CB |
CA |
C |
HA |
242.0 |
240.0 |
| C |
CA |
CB |
HB2 |
219.0 |
295.0 |
| C |
CA |
CB |
HB3 |
339.0 |
55.0 |
| N |
CA |
C |
HA |
120.0 |
120.0 |
| C |
CA |
N |
H |
180.0 |
296.0 |
| C |
CA |
N |
H2 |
300.0 |
60.0 |
| CA |
C |
OXT |
HXT |
181.3 |
180.0 |
| NE2 |
CD |
NE1 |
HD2 |
245.2 |
120.0 |
| NE1 |
CD |
CG |
HG2 |
2.3 |
60.0 |
| NE1 |
CD |
CG |
HG3 |
122.1 |
300.0 |
| HE12 |
NE1 |
CD |
HE13 |
240.0 |
236.1 |
| CD |
CG |
CB |
HB2 |
142.0 |
60.0 |
| CD |
CG |
CB |
HB3 |
22.0 |
300.0 |
| HG2 |
CG |
CD |
HG3 |
240.2 |
120.0 |
| C |
CA |
CB |
N |
237.8 |
240.0 |
| C |
CA |
CB |
HA |
118.0 |
120.0 |
| CB |
CA |
C |
OXT |
248.7 |
280.0 |
| N |
CA |
CB |
HA |
240.3 |
239.9 |
| CB |
CA |
N |
H |
59.0 |
176.1 |
| CB |
CA |
N |
H2 |
179.0 |
300.1 |
| CG |
CB |
CA |
HB2 |
240.0 |
239.9 |
| CG |
CB |
CA |
HB3 |
120.0 |
119.9 |
| HB2 |
CB |
CA |
HB3 |
240.0 |
240.0 |
| C |
CA |
N |
CB |
121.0 |
120.0 |
| C |
CA |
N |
HA |
240.4 |
240.0 |
| N |
CA |
C |
OXT |
126.8 |
160.0 |
| CB |
CA |
N |
HA |
119.3 |
120.0 |
| N |
CA |
CB |
HB2 |
341.3 |
55.0 |
| N |
CA |
CB |
HB3 |
101.2 |
175.0 |
| H |
N |
CA |
H2 |
240.0 |
236.0 |
| CG |
CB |
CA |
N |
221.2 |
294.9 |
| CG |
CB |
CA |
HA |
341.0 |
55.0 |
| CA |
CB |
CG |
HB2 |
120.0 |
120.1 |
| CA |
CB |
CG |
HB3 |
240.0 |
240.1 |
| HB2 |
CB |
CG |
HB3 |
120.0 |
120.0 |
| C |
CA |
HA |
CB |
241.7 |
240.0 |
| C |
CA |
HA |
N |
121.1 |
120.0 |
| HA |
CA |
C |
OXT |
6.8 |
40.0 |
| CB |
CA |
HA |
N |
239.4 |
240.0 |
| HA |
CA |
CB |
HB2 |
101.0 |
175.1 |
| HA |
CA |
CB |
HB3 |
221.0 |
295.1 |
| HA |
CA |
N |
H |
299.6 |
56.0 |
| HA |
CA |
N |
H2 |
59.6 |
180.0 |
| HB2 |
CB |
CA |
N |
341.3 |
55.0 |
| HB2 |
CB |
CA |
HA |
101.0 |
175.1 |
| CA |
CB |
HB2 |
HB3 |
120.0 |
120.0 |
| CG |
CB |
HB2 |
HB3 |
240.0 |
240.0 |
| HB3 |
CB |
CA |
N |
101.2 |
175.0 |
| HB3 |
CB |
CA |
HA |
221.0 |
295.1 |
| CA |
CB |
HB3 |
HB2 |
240.0 |
240.0 |
| CG |
CB |
HB3 |
HB2 |
120.0 |
120.0 |
| CD |
CG |
HG2 |
HG3 |
119.8 |
240.0 |
| HG2 |
CG |
CB |
HB2 |
21.9 |
180.0 |
| HG2 |
CG |
CB |
HB3 |
261.9 |
60.0 |
| CD |
CG |
HG3 |
HG2 |
240.2 |
120.0 |
| HG3 |
CG |
CB |
HB2 |
262.1 |
299.9 |
| HG3 |
CG |
CB |
HB3 |
142.1 |
179.9 |
| HD2 |
CD |
NE1 |
HE12 |
294.8 |
176.1 |
| HD2 |
CD |
NE1 |
HE13 |
54.8 |
300.0 |
| HD2 |
CD |
CG |
HG2 |
117.7 |
300.0 |
| HD2 |
CD |
CG |
HG3 |
237.5 |
180.0 |
| HE12 |
NE1 |
CD |
HD2 |
294.8 |
176.1 |
| CD |
NE1 |
HE12 |
HE13 |
120.0 |
124.0 |
| HE13 |
NE1 |
CD |
HD2 |
54.8 |
300.0 |
| CD |
NE1 |
HE13 |
HE12 |
240.0 |
236.0 |
| HE22 |
NE2 |
CD |
HD2 |
65.2 |
180.0 |
| HE23 |
NE2 |
CD |
HD2 |
185.2 |
303.9 |
| H |
N |
CA |
HA |
299.6 |
56.0 |
| CA |
N |
H |
H2 |
120.1 |
124.0 |
| O |
C |
OXT |
CA |
178.7 |
180.3 |
| OXT |
C |
CA |
CB |
248.7 |
280.0 |
| OXT |
C |
CA |
N |
126.8 |
160.0 |
| OXT |
C |
CA |
HA |
6.8 |
40.0 |
| H2 |
N |
CA |
HA |
59.6 |
180.0 |
| CA |
N |
H2 |
H |
239.9 |
236.0 |