PDB Chemical Component XFH
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for XFH
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C02 |
N01 |
1.371 |
1.324 |
| C06 |
N01 |
1.368 |
1.320 |
| C03 |
C02 |
1.401 |
1.391 |
| C02 |
N02 |
1.361 |
1.390 |
| N02 |
HN02 |
1.000 |
0.970 |
| N02 |
HN0A |
1.000 |
0.970 |
| C04 |
C03 |
1.390 |
1.383 |
| C03 |
H03 |
1.080 |
1.080 |
| C07 |
C04 |
1.501 |
1.507 |
| C04 |
C05 |
1.397 |
1.389 |
| C05 |
C06 |
1.407 |
1.381 |
| C05 |
H05 |
1.080 |
1.080 |
| C06 |
C08 |
1.530 |
1.507 |
| C07 |
H07 |
1.100 |
1.090 |
| C07 |
H07A |
1.100 |
1.090 |
| C07 |
H07B |
1.100 |
1.091 |
| C08 |
C09 |
1.552 |
1.530 |
| C08 |
H08 |
1.100 |
1.090 |
| C08 |
H08A |
1.100 |
1.090 |
| C09 |
C13 |
1.528 |
1.507 |
| C09 |
H09 |
1.100 |
1.090 |
| C09 |
H09A |
1.100 |
1.090 |
| C12 |
C11 |
1.404 |
1.382 |
| C11 |
C16 |
1.396 |
1.382 |
| C11 |
H11 |
1.080 |
1.079 |
| C13 |
C12 |
1.399 |
1.383 |
| C12 |
H12 |
1.080 |
1.080 |
| C13 |
C14 |
1.422 |
1.382 |
| C14 |
C15 |
1.421 |
1.384 |
| C14 |
H14 |
1.080 |
1.080 |
| C15 |
C17 |
1.515 |
1.507 |
| C15 |
C16 |
1.403 |
1.382 |
| C16 |
H16 |
1.080 |
1.080 |
| C17 |
C18 |
1.542 |
1.530 |
| C17 |
H17 |
1.100 |
1.090 |
| C17 |
H17A |
1.100 |
1.090 |
| C26 |
C18 |
1.526 |
1.507 |
| C18 |
H18 |
1.100 |
1.089 |
| C18 |
H18A |
1.099 |
1.091 |
| C26 |
C21 |
1.397 |
1.383 |
| C22 |
C21 |
1.406 |
1.391 |
| C21 |
H21 |
1.080 |
1.080 |
| N23 |
C22 |
1.358 |
1.323 |
| C22 |
N22 |
1.363 |
1.390 |
| N22 |
HN22 |
1.000 |
0.970 |
| N22 |
HN2A |
1.000 |
0.969 |
| C24 |
N23 |
1.356 |
1.320 |
| C27 |
C24 |
1.514 |
1.508 |
| C24 |
C25 |
1.401 |
1.380 |
| C25 |
C26 |
1.401 |
1.389 |
| C25 |
H25 |
1.080 |
1.079 |
| C27 |
H27 |
1.100 |
1.089 |
| C27 |
H27A |
1.100 |
1.089 |
| C27 |
H27B |
1.100 |
1.090 |
Bond Angles for XFH
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C02 |
N02 |
HN02 |
109.5 |
120.0 |
| C02 |
N02 |
HN0A |
109.4 |
119.9 |
| HN02 |
N02 |
HN0A |
109.5 |
120.0 |
| C04 |
C03 |
H03 |
120.7 |
120.5 |
| C04 |
C05 |
C06 |
120.7 |
119.3 |
| C04 |
C05 |
H05 |
119.6 |
120.3 |
| C06 |
C05 |
H05 |
119.6 |
120.4 |
| C05 |
C06 |
C08 |
120.1 |
119.5 |
| C06 |
C08 |
C09 |
109.2 |
109.4 |
| C06 |
C08 |
H08 |
109.6 |
109.5 |
| C06 |
C08 |
H08A |
109.6 |
109.5 |
| H07 |
C07 |
H07A |
109.5 |
109.5 |
| H07 |
C07 |
H07B |
109.5 |
109.5 |
| H07A |
C07 |
H07B |
109.5 |
109.4 |
| C09 |
C08 |
H08 |
109.6 |
109.4 |
| C09 |
C08 |
H08A |
109.6 |
109.5 |
| C08 |
C09 |
C13 |
113.8 |
109.5 |
| C08 |
C09 |
H09 |
108.0 |
109.5 |
| C08 |
C09 |
H09A |
108.0 |
109.5 |
| H08 |
C08 |
H08A |
109.4 |
109.5 |
| C13 |
C09 |
H09 |
108.0 |
109.5 |
| C13 |
C09 |
H09A |
108.0 |
109.5 |
| C09 |
C13 |
C12 |
116.9 |
120.0 |
| C09 |
C13 |
C14 |
124.6 |
120.0 |
| H09 |
C09 |
H09A |
110.9 |
109.4 |
| C12 |
C11 |
C16 |
118.6 |
120.0 |
| C12 |
C11 |
H11 |
120.7 |
120.0 |
| C16 |
C11 |
H11 |
120.7 |
120.0 |
| C11 |
C16 |
C15 |
121.0 |
120.1 |
| C11 |
C16 |
H16 |
119.5 |
120.0 |
| C13 |
C12 |
H12 |
118.7 |
120.0 |
| C13 |
C14 |
C15 |
119.4 |
120.0 |
| C13 |
C14 |
H14 |
120.3 |
120.0 |
| C15 |
C14 |
H14 |
120.3 |
120.0 |
| C14 |
C15 |
C17 |
124.9 |
120.0 |
| C14 |
C15 |
C16 |
120.0 |
120.0 |
| C16 |
C15 |
C17 |
115.1 |
120.1 |
| C15 |
C17 |
C18 |
108.4 |
109.4 |
| C15 |
C17 |
H17 |
109.8 |
109.4 |
| C15 |
C17 |
H17A |
109.8 |
109.5 |
| C15 |
C16 |
H16 |
119.5 |
119.9 |
| C18 |
C17 |
H17 |
109.8 |
109.5 |
| C18 |
C17 |
H17A |
109.8 |
109.5 |
| C17 |
C18 |
H18 |
107.2 |
109.5 |
| C17 |
C18 |
H18A |
107.2 |
109.5 |
| H17 |
C17 |
H17A |
109.1 |
109.5 |
| C26 |
C18 |
H18 |
107.2 |
109.5 |
| C26 |
C18 |
H18A |
107.2 |
109.5 |
| H18 |
C18 |
H18A |
111.6 |
109.5 |
| C26 |
C21 |
H21 |
120.4 |
120.4 |
| C22 |
C21 |
H21 |
120.4 |
120.5 |
| C22 |
N22 |
HN22 |
109.5 |
120.0 |
| C22 |
N22 |
HN2A |
109.5 |
120.0 |
| HN22 |
N22 |
HN2A |
109.4 |
120.0 |
| C24 |
C25 |
C26 |
120.8 |
119.3 |
| C24 |
C25 |
H25 |
119.6 |
120.3 |
| C26 |
C25 |
H25 |
119.6 |
120.4 |
| H27 |
C27 |
H27A |
109.4 |
109.5 |
| H27 |
C27 |
H27B |
109.5 |
109.5 |
| H27A |
C27 |
H27B |
109.5 |
109.5 |
Torsion Angles for XFH
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C03 |
C02 |
N02 |
HN02 |
179.9 |
180.0 |
| C03 |
C02 |
N02 |
HN0A |
299.9 |
0.1 |
| HN02 |
N02 |
C02 |
HN0A |
240.0 |
180.0 |
| C02 |
N02 |
HN02 |
HN0A |
120.0 |
180.0 |
| C02 |
N02 |
HN0A |
HN02 |
240.0 |
180.0 |
| C07 |
C04 |
C03 |
H03 |
0.6 |
0.1 |
| C07 |
C04 |
C05 |
H05 |
0.2 |
0.1 |
| C05 |
C04 |
C03 |
H03 |
180.7 |
180.1 |
| C06 |
C05 |
C04 |
H05 |
180.0 |
179.9 |
| C04 |
C05 |
C06 |
C08 |
177.9 |
180.0 |
| C04 |
C05 |
C06 |
H05 |
180.0 |
180.1 |
| C05 |
C06 |
C08 |
C09 |
298.5 |
125.1 |
| C05 |
C06 |
C08 |
H08 |
58.4 |
245.0 |
| C05 |
C06 |
C08 |
H08A |
178.5 |
5.1 |
| C04 |
C05 |
H05 |
C06 |
180.0 |
179.9 |
| H05 |
C05 |
C06 |
C08 |
357.9 |
359.9 |
| C08 |
C06 |
C05 |
H05 |
357.9 |
359.9 |
| C09 |
C08 |
C06 |
H08 |
240.0 |
240.0 |
| C09 |
C08 |
C06 |
H08A |
120.0 |
120.0 |
| C06 |
C08 |
C09 |
C13 |
155.8 |
180.0 |
| C06 |
C08 |
C09 |
H09 |
275.8 |
300.0 |
| C06 |
C08 |
C09 |
H09A |
35.8 |
60.0 |
| H08 |
C08 |
C06 |
H08A |
240.0 |
240.0 |
| H07A |
C07 |
H07 |
H07B |
120.0 |
119.9 |
| H07 |
C07 |
H07A |
H07B |
240.0 |
240.0 |
| H07 |
C07 |
H07B |
H07A |
120.0 |
120.0 |
| C06 |
C08 |
C09 |
H08 |
120.0 |
120.0 |
| C06 |
C08 |
C09 |
H08A |
240.0 |
240.0 |
| H08 |
C08 |
C09 |
H08A |
120.1 |
120.0 |
| C13 |
C09 |
C08 |
H09 |
240.0 |
240.0 |
| C13 |
C09 |
C08 |
H09A |
120.0 |
120.0 |
| C08 |
C09 |
C13 |
C12 |
30.5 |
90.0 |
| C08 |
C09 |
C13 |
C14 |
210.8 |
270.0 |
| H09 |
C09 |
C08 |
H09A |
240.0 |
240.0 |
| C06 |
C08 |
H08 |
C09 |
240.3 |
240.1 |
| C06 |
C08 |
H08 |
H08A |
120.1 |
120.0 |
| C09 |
C08 |
H08 |
H08A |
239.9 |
240.0 |
| H08 |
C08 |
C09 |
C13 |
35.8 |
60.0 |
| H08 |
C08 |
C09 |
H09 |
155.8 |
180.0 |
| H08 |
C08 |
C09 |
H09A |
275.8 |
300.0 |
| C06 |
C08 |
H08A |
C09 |
119.7 |
120.0 |
| C06 |
C08 |
H08A |
H08 |
239.9 |
240.0 |
| C09 |
C08 |
H08A |
H08 |
120.1 |
120.0 |
| H08A |
C08 |
C09 |
C13 |
275.7 |
300.0 |
| H08A |
C08 |
C09 |
H09 |
35.7 |
60.0 |
| H08A |
C08 |
C09 |
H09A |
155.8 |
180.0 |
| C13 |
C09 |
C08 |
H08 |
35.8 |
60.0 |
| C13 |
C09 |
C08 |
H08A |
275.7 |
300.0 |
| C08 |
C09 |
C13 |
H09 |
120.0 |
120.0 |
| C08 |
C09 |
C13 |
H09A |
240.0 |
240.0 |
| H09 |
C09 |
C13 |
H09A |
120.0 |
120.0 |
| C09 |
C13 |
C12 |
H12 |
0.8 |
360.0 |
| C09 |
C13 |
C14 |
C15 |
179.2 |
180.0 |
| C09 |
C13 |
C14 |
H14 |
359.2 |
360.0 |
| H09 |
C09 |
C08 |
H08 |
155.8 |
180.0 |
| H09 |
C09 |
C08 |
H08A |
35.7 |
60.0 |
| C08 |
C09 |
H09 |
C13 |
236.4 |
240.0 |
| C08 |
C09 |
H09 |
H09A |
118.2 |
120.0 |
| C13 |
C09 |
H09 |
H09A |
241.8 |
240.0 |
| H09 |
C09 |
C13 |
C12 |
270.5 |
330.0 |
| H09 |
C09 |
C13 |
C14 |
90.8 |
149.9 |
| H09A |
C09 |
C08 |
H08 |
275.8 |
300.0 |
| H09A |
C09 |
C08 |
H08A |
155.8 |
180.0 |
| C08 |
C09 |
H09A |
C13 |
123.6 |
120.0 |
| C08 |
C09 |
H09A |
H09 |
241.8 |
240.0 |
| C13 |
C09 |
H09A |
H09 |
118.2 |
120.0 |
| H09A |
C09 |
C13 |
C12 |
150.5 |
210.0 |
| H09A |
C09 |
C13 |
C14 |
330.8 |
30.0 |
| C09 |
C13 |
C12 |
C11 |
180.8 |
180.1 |
| C16 |
C11 |
C12 |
H11 |
180.0 |
180.1 |
| C12 |
C11 |
C16 |
C15 |
359.9 |
0.1 |
| C12 |
C11 |
C16 |
H16 |
179.9 |
179.7 |
| C12 |
C11 |
C16 |
H11 |
180.0 |
179.9 |
| C14 |
C15 |
C16 |
C11 |
0.1 |
359.9 |
| C11 |
C16 |
C15 |
C17 |
180.6 |
179.9 |
| C15 |
C16 |
C11 |
H16 |
180.0 |
180.4 |
| C12 |
C11 |
H11 |
C16 |
180.0 |
180.1 |
| H11 |
C11 |
C16 |
C15 |
179.9 |
180.3 |
| H11 |
C11 |
C16 |
H16 |
360.0 |
359.8 |
| C12 |
C13 |
C09 |
H09 |
270.5 |
330.0 |
| C12 |
C13 |
C09 |
H09A |
150.5 |
210.0 |
| C09 |
C13 |
C12 |
C14 |
180.3 |
180.0 |
| C13 |
C12 |
C11 |
C16 |
359.7 |
359.8 |
| C13 |
C12 |
C11 |
H11 |
179.7 |
179.7 |
| H12 |
C12 |
C11 |
C16 |
179.7 |
179.9 |
| H12 |
C12 |
C11 |
H11 |
359.7 |
359.8 |
| C14 |
C13 |
C09 |
H09 |
90.8 |
149.9 |
| C14 |
C13 |
C09 |
H09A |
330.8 |
30.0 |
| C09 |
C13 |
C14 |
C12 |
179.7 |
180.0 |
| C14 |
C13 |
C12 |
H12 |
180.6 |
180.0 |
| C15 |
C14 |
C13 |
H14 |
180.0 |
180.0 |
| C13 |
C14 |
C15 |
C17 |
179.7 |
180.0 |
| C13 |
C14 |
C15 |
C16 |
0.1 |
0.0 |
| C11 |
C16 |
C15 |
C14 |
0.1 |
359.9 |
| C13 |
C14 |
C15 |
H14 |
180.0 |
180.0 |
| C16 |
C15 |
C14 |
C17 |
180.5 |
180.0 |
| C14 |
C15 |
C17 |
C18 |
221.9 |
90.0 |
| C14 |
C15 |
C17 |
H17 |
341.9 |
210.0 |
| C14 |
C15 |
C17 |
H17A |
101.9 |
330.0 |
| C14 |
C15 |
C16 |
H16 |
180.1 |
180.4 |
| C13 |
C14 |
H14 |
C15 |
180.0 |
180.0 |
| H14 |
C14 |
C15 |
C17 |
359.7 |
360.0 |
| H14 |
C14 |
C15 |
C16 |
180.1 |
180.0 |
| C17 |
C15 |
C14 |
H14 |
359.7 |
360.0 |
| C14 |
C15 |
C17 |
C16 |
180.5 |
180.0 |
| C17 |
C15 |
C16 |
H16 |
0.6 |
0.4 |
| C18 |
C17 |
C15 |
H17 |
240.0 |
240.0 |
| C18 |
C17 |
C15 |
H17A |
120.0 |
120.0 |
| C15 |
C17 |
C18 |
H18 |
344.3 |
300.0 |
| C15 |
C17 |
C18 |
H18A |
104.3 |
60.0 |
| H17 |
C17 |
C15 |
H17A |
240.0 |
240.0 |
| C15 |
C16 |
C11 |
H11 |
179.9 |
180.3 |
| C11 |
C16 |
C15 |
H16 |
180.0 |
179.6 |
| C16 |
C15 |
C14 |
H14 |
180.1 |
180.0 |
| C14 |
C15 |
C16 |
C17 |
179.6 |
180.0 |
| C16 |
C15 |
C17 |
C18 |
41.4 |
270.0 |
| C16 |
C15 |
C17 |
H17 |
161.4 |
30.0 |
| C16 |
C15 |
C17 |
H17A |
281.4 |
150.0 |
| H16 |
C16 |
C11 |
H11 |
360.0 |
359.8 |
| C11 |
C16 |
H16 |
C15 |
180.0 |
180.4 |
| H16 |
C16 |
C15 |
C17 |
0.6 |
0.4 |
| C15 |
C17 |
C18 |
H17 |
120.0 |
119.9 |
| C15 |
C17 |
C18 |
H17A |
240.0 |
240.0 |
| H17 |
C17 |
C18 |
H17A |
120.0 |
120.0 |
| C26 |
C18 |
C17 |
H18 |
240.0 |
240.0 |
| C26 |
C18 |
C17 |
H18A |
120.0 |
120.0 |
| H18 |
C18 |
C17 |
H18A |
240.0 |
240.0 |
| C15 |
C17 |
H17 |
C18 |
240.8 |
240.0 |
| C15 |
C17 |
H17 |
H17A |
120.4 |
120.0 |
| C18 |
C17 |
H17 |
H17A |
239.6 |
240.0 |
| H17 |
C17 |
C18 |
H18 |
224.3 |
180.0 |
| H17 |
C17 |
C18 |
H18A |
344.3 |
300.1 |
| C15 |
C17 |
H17A |
C18 |
119.2 |
120.0 |
| C15 |
C17 |
H17A |
H17 |
239.6 |
240.0 |
| C18 |
C17 |
H17A |
H17 |
120.4 |
120.0 |
| H17A |
C17 |
C18 |
H18 |
104.3 |
60.0 |
| H17A |
C17 |
C18 |
H18A |
224.3 |
180.0 |
| C26 |
C18 |
C17 |
H17 |
104.3 |
60.0 |
| C26 |
C18 |
C17 |
H17A |
344.3 |
300.0 |
| C17 |
C18 |
C26 |
H18 |
120.0 |
120.0 |
| C17 |
C18 |
C26 |
H18A |
240.0 |
240.0 |
| H18 |
C18 |
C26 |
H18A |
120.0 |
120.0 |
| H18 |
C18 |
C17 |
H17 |
224.3 |
180.0 |
| H18 |
C18 |
C17 |
H17A |
104.3 |
60.0 |
| C17 |
C18 |
H18 |
H18A |
117.1 |
120.0 |
| C26 |
C18 |
H18 |
H18A |
242.9 |
240.0 |
| H18A |
C18 |
C17 |
H17 |
344.3 |
300.1 |
| H18A |
C18 |
C17 |
H17A |
224.3 |
180.0 |
| C17 |
C18 |
H18A |
H18 |
242.9 |
240.0 |
| C26 |
C18 |
H18A |
H18 |
117.1 |
120.1 |
| C21 |
C26 |
C18 |
H18 |
38.4 |
149.5 |
| C21 |
C26 |
C18 |
H18A |
278.4 |
29.5 |
| C22 |
C21 |
C26 |
H21 |
180.0 |
179.7 |
| C26 |
C21 |
C22 |
H21 |
180.0 |
180.3 |
| N23 |
C22 |
C21 |
H21 |
179.4 |
179.9 |
| N23 |
C22 |
N22 |
HN22 |
0.0 |
180.1 |
| N23 |
C22 |
N22 |
HN2A |
120.0 |
0.0 |
| N22 |
C22 |
C21 |
H21 |
359.9 |
360.0 |
| HN22 |
N22 |
C22 |
HN2A |
240.0 |
180.1 |
| C22 |
N22 |
HN22 |
HN2A |
120.0 |
179.9 |
| C22 |
N22 |
HN2A |
HN22 |
240.0 |
180.1 |
| C27 |
C24 |
C25 |
H25 |
359.7 |
360.0 |
| C26 |
C25 |
C24 |
H25 |
180.0 |
179.7 |
| C25 |
C26 |
C18 |
H18 |
217.7 |
330.0 |
| C25 |
C26 |
C18 |
H18A |
97.7 |
210.0 |
| C25 |
C26 |
C21 |
H21 |
180.3 |
179.8 |
| C24 |
C25 |
C26 |
H25 |
180.0 |
180.3 |
| C24 |
C25 |
H25 |
C26 |
180.0 |
179.7 |
| H27A |
C27 |
H27 |
H27B |
120.0 |
120.0 |
| H27 |
C27 |
H27A |
H27B |
240.0 |
240.0 |
| H27 |
C27 |
H27B |
H27A |
120.0 |
120.1 |