PDB Chemical Component XEZ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for XEZ
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
CAC |
NAH |
1.327 |
1.307 |
CAC |
CAN |
1.320 |
1.409 |
NAH |
NAM |
1.231 |
1.400 |
NAM |
CAF |
1.327 |
1.349 |
CAF |
CAN |
1.321 |
1.364 |
CAN |
CAP |
1.385 |
1.485 |
CAP |
CAG |
1.383 |
1.362 |
CAP |
NAI |
1.339 |
1.342 |
CAG |
NAS |
1.380 |
1.365 |
NAS |
CAR |
1.378 |
1.374 |
NAS |
CAQ |
1.372 |
1.369 |
NAI |
CAE |
1.321 |
1.311 |
CAE |
CAR |
1.388 |
1.410 |
CAR |
NAJ |
1.331 |
1.325 |
NAJ |
CAD |
1.334 |
1.329 |
CAD |
CAQ |
1.327 |
1.379 |
CAQ |
CAO |
1.380 |
1.478 |
CAO |
CAB |
1.319 |
1.411 |
CAO |
NAK |
1.322 |
1.319 |
CAB |
CAA |
1.320 |
1.350 |
CAA |
NAL |
1.325 |
1.350 |
NAL |
NAK |
1.228 |
1.400 |
CAC |
HAC |
1.080 |
1.080 |
NAM |
HAM |
1.000 |
0.970 |
CAF |
HAF |
1.080 |
1.080 |
CAG |
HAG |
1.080 |
1.079 |
CAE |
HAE |
1.080 |
1.080 |
CAD |
HAD |
1.080 |
1.080 |
CAB |
HAB |
1.080 |
1.080 |
NAL |
HAK |
1.000 |
0.970 |
CAA |
HAA |
1.080 |
1.080 |
Bond Angles for XEZ
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
NAH |
CAC |
CAN |
107.1 |
108.1 |
CAC |
NAH |
NAM |
109.6 |
108.6 |
NAH |
CAC |
HAC |
126.4 |
126.0 |
CAC |
CAN |
CAF |
106.6 |
107.6 |
CAC |
CAN |
CAP |
126.4 |
126.2 |
CAN |
CAC |
HAC |
126.4 |
125.9 |
NAH |
NAM |
CAF |
109.5 |
108.2 |
NAH |
NAM |
HAM |
125.3 |
126.0 |
NAM |
CAF |
CAN |
107.1 |
107.6 |
CAF |
NAM |
HAM |
125.2 |
125.8 |
NAM |
CAF |
HAF |
126.4 |
126.2 |
CAF |
CAN |
CAP |
126.9 |
126.2 |
CAN |
CAF |
HAF |
126.4 |
126.2 |
CAN |
CAP |
CAG |
119.1 |
119.5 |
CAN |
CAP |
NAI |
120.3 |
119.6 |
CAG |
CAP |
NAI |
120.5 |
120.9 |
CAP |
CAG |
NAS |
118.6 |
119.6 |
CAP |
CAG |
HAG |
120.7 |
120.2 |
CAP |
NAI |
CAE |
121.6 |
121.3 |
CAG |
NAS |
CAR |
119.9 |
119.4 |
CAG |
NAS |
CAQ |
133.8 |
133.5 |
NAS |
CAG |
HAG |
120.7 |
120.2 |
CAR |
NAS |
CAQ |
106.2 |
107.1 |
NAS |
CAR |
CAE |
118.8 |
118.9 |
NAS |
CAR |
NAJ |
107.5 |
108.4 |
NAS |
CAQ |
CAD |
108.3 |
106.6 |
NAS |
CAQ |
CAO |
121.5 |
126.7 |
NAI |
CAE |
CAR |
120.6 |
119.9 |
NAI |
CAE |
HAE |
119.7 |
120.0 |
CAE |
CAR |
NAJ |
133.8 |
132.8 |
CAR |
CAE |
HAE |
119.7 |
120.1 |
CAR |
NAJ |
CAD |
109.3 |
109.5 |
NAJ |
CAD |
CAQ |
108.7 |
108.3 |
NAJ |
CAD |
HAD |
125.7 |
125.8 |
CAD |
CAQ |
CAO |
130.2 |
126.7 |
CAQ |
CAD |
HAD |
125.7 |
125.8 |
CAQ |
CAO |
CAB |
125.5 |
126.1 |
CAQ |
CAO |
NAK |
126.8 |
126.1 |
CAB |
CAO |
NAK |
107.6 |
107.8 |
CAO |
CAB |
CAA |
106.1 |
107.8 |
CAO |
CAB |
HAB |
126.9 |
126.1 |
CAO |
NAK |
NAL |
109.3 |
108.1 |
CAB |
CAA |
NAL |
107.3 |
108.1 |
CAA |
CAB |
HAB |
126.9 |
126.1 |
CAB |
CAA |
HAA |
126.4 |
125.9 |
CAA |
NAL |
NAK |
109.6 |
108.2 |
CAA |
NAL |
HAK |
125.2 |
125.9 |
NAL |
CAA |
HAA |
126.4 |
126.0 |
NAK |
NAL |
HAK |
125.2 |
125.9 |
Torsion Angles for XEZ
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
NAH |
CAC |
CAN |
CAF |
0.1 |
0.0 |
NAH |
CAC |
CAN |
CAP |
180.0 |
180.0 |
CAN |
CAC |
NAH |
HAC |
180.0 |
180.2 |
CAC |
NAH |
NAM |
CAF |
0.0 |
360.0 |
CAC |
NAH |
NAM |
HAM |
180.0 |
180.0 |
CAN |
CAC |
NAH |
NAM |
359.9 |
-0.0 |
NAH |
CAC |
CAN |
HAC |
180.0 |
179.8 |
NAM |
CAF |
CAN |
CAC |
359.9 |
359.9 |
CAF |
CAN |
CAC |
CAP |
180.0 |
180.1 |
CAC |
CAN |
CAF |
HAF |
179.9 |
180.0 |
CAC |
CAN |
CAP |
CAG |
359.5 |
0.1 |
CAC |
CAN |
CAP |
NAI |
179.9 |
179.8 |
NAM |
NAH |
CAC |
CAN |
359.9 |
360.0 |
NAM |
NAH |
CAC |
HAC |
180.0 |
179.8 |
NAH |
NAM |
CAF |
CAN |
0.0 |
0.1 |
CAF |
NAM |
NAH |
HAM |
180.0 |
180.0 |
NAH |
NAM |
CAF |
HAF |
180.0 |
180.0 |
CAC |
CAN |
CAF |
NAM |
359.9 |
359.9 |
NAH |
NAM |
CAF |
HAM |
180.0 |
180.0 |
NAM |
CAF |
CAN |
CAP |
180.0 |
180.0 |
CAN |
CAF |
NAM |
HAF |
180.0 |
180.1 |
CAC |
CAN |
CAF |
CAP |
180.0 |
179.9 |
CAF |
CAN |
CAC |
HAC |
180.1 |
180.2 |
CAN |
CAF |
NAM |
HAM |
180.0 |
180.0 |
NAM |
CAF |
CAN |
HAF |
180.0 |
179.9 |
CAF |
CAN |
CAP |
CAG |
179.5 |
179.9 |
CAF |
CAN |
CAP |
NAI |
359.9 |
359.7 |
CAC |
CAN |
CAP |
CAF |
180.1 |
180.1 |
CAP |
CAN |
CAC |
HAC |
0.0 |
0.1 |
CAP |
CAN |
CAF |
HAF |
360.0 |
0.1 |
CAG |
CAP |
CAN |
NAI |
179.6 |
180.2 |
CAN |
CAP |
CAG |
NAS |
180.0 |
180.0 |
CAN |
CAP |
CAG |
HAG |
360.0 |
0.0 |
CAN |
CAP |
NAI |
CAE |
180.1 |
180.0 |
CAN |
CAP |
CAG |
NAI |
180.4 |
179.8 |
CAG |
CAP |
NAI |
CAE |
0.5 |
359.8 |
CAP |
CAG |
NAS |
CAR |
0.1 |
0.0 |
CAP |
CAG |
NAS |
CAQ |
180.0 |
180.0 |
NAS |
CAG |
CAP |
HAG |
180.0 |
179.9 |
CAN |
CAP |
NAI |
CAG |
179.6 |
180.2 |
NAI |
CAP |
CAG |
NAS |
359.6 |
0.2 |
NAI |
CAP |
CAG |
HAG |
179.6 |
180.3 |
CAP |
NAI |
CAE |
CAR |
359.6 |
360.0 |
CAP |
NAI |
CAE |
HAE |
179.6 |
180.0 |
NAS |
CAG |
CAP |
NAI |
359.6 |
0.2 |
CAP |
CAG |
NAS |
HAG |
180.0 |
180.1 |
CAR |
NAS |
CAG |
CAQ |
180.2 |
180.0 |
CAG |
NAS |
CAR |
CAE |
360.0 |
359.7 |
CAG |
NAS |
CAR |
NAJ |
179.9 |
180.0 |
CAG |
NAS |
CAQ |
CAD |
180.2 |
180.0 |
CAG |
NAS |
CAQ |
CAO |
359.3 |
-0.0 |
CAG |
NAS |
CAR |
CAQ |
179.9 |
180.0 |
CAR |
NAS |
CAG |
HAG |
180.1 |
180.0 |
CAR |
NAS |
CAQ |
CAD |
0.0 |
360.0 |
CAR |
NAS |
CAQ |
CAO |
179.1 |
180.0 |
NAI |
CAE |
CAR |
NAS |
0.2 |
0.3 |
CAE |
CAR |
NAS |
NAJ |
180.1 |
179.7 |
NAS |
CAR |
CAE |
HAE |
180.2 |
180.3 |
NAS |
CAR |
NAJ |
CAD |
359.9 |
360.0 |
CAG |
NAS |
CAQ |
CAR |
180.2 |
180.0 |
CAQ |
NAS |
CAG |
HAG |
360.0 |
359.9 |
CAQ |
NAS |
CAR |
CAE |
180.1 |
179.8 |
CAQ |
NAS |
CAR |
NAJ |
0.1 |
0.0 |
NAJ |
CAD |
CAQ |
NAS |
359.9 |
360.0 |
CAD |
CAQ |
NAS |
CAO |
180.9 |
180.0 |
NAS |
CAQ |
CAD |
HAD |
179.9 |
180.0 |
NAS |
CAQ |
CAO |
CAB |
359.5 |
-0.0 |
NAS |
CAQ |
CAO |
NAK |
180.9 |
179.7 |
NAS |
CAR |
CAE |
NAI |
0.2 |
0.3 |
NAI |
CAE |
CAR |
NAJ |
180.2 |
179.9 |
CAR |
CAE |
NAI |
HAE |
180.0 |
180.0 |
CAE |
CAR |
NAS |
CAQ |
180.1 |
179.8 |
NAS |
CAR |
CAE |
NAJ |
179.9 |
180.3 |
NAI |
CAE |
CAR |
HAE |
180.0 |
180.0 |
CAE |
CAR |
NAJ |
CAD |
179.8 |
180.3 |
NAJ |
CAR |
NAS |
CAQ |
0.1 |
0.0 |
NAS |
CAR |
NAJ |
CAE |
180.1 |
179.7 |
NAJ |
CAR |
CAE |
HAE |
0.2 |
359.9 |
CAR |
NAJ |
CAD |
CAQ |
0.1 |
0.0 |
CAR |
NAJ |
CAD |
HAD |
180.1 |
180.0 |
NAS |
CAQ |
CAD |
NAJ |
359.9 |
360.0 |
NAJ |
CAD |
CAQ |
CAO |
180.9 |
180.0 |
CAQ |
CAD |
NAJ |
HAD |
180.0 |
180.0 |
NAS |
CAQ |
CAD |
CAO |
179.0 |
180.0 |
NAJ |
CAD |
CAQ |
HAD |
180.0 |
180.0 |
CAD |
CAQ |
CAO |
CAB |
178.4 |
179.9 |
CAD |
CAQ |
CAO |
NAK |
359.8 |
359.6 |
NAS |
CAQ |
CAO |
CAD |
181.1 |
180.1 |
CAO |
CAQ |
CAD |
HAD |
0.9 |
0.1 |
CAB |
CAO |
CAQ |
NAK |
178.6 |
180.3 |
CAQ |
CAO |
CAB |
CAA |
180.8 |
180.0 |
CAQ |
CAO |
CAB |
HAB |
0.8 |
-0.0 |
CAQ |
CAO |
NAK |
NAL |
179.1 |
179.9 |
CAQ |
CAO |
CAB |
NAK |
181.2 |
179.7 |
CAB |
CAO |
NAK |
NAL |
0.3 |
359.6 |
CAO |
CAB |
CAA |
NAL |
0.3 |
0.0 |
CAA |
CAB |
CAO |
HAB |
180.0 |
180.0 |
CAO |
CAB |
CAA |
HAA |
180.3 |
180.0 |
CAQ |
CAO |
NAK |
CAB |
178.8 |
180.3 |
NAK |
CAO |
CAB |
CAA |
359.6 |
0.2 |
NAK |
CAO |
CAB |
HAB |
179.6 |
180.3 |
CAA |
NAL |
NAK |
CAO |
360.0 |
0.4 |
CAO |
NAK |
NAL |
HAK |
180.0 |
180.2 |
CAA |
CAB |
CAO |
NAK |
359.6 |
0.2 |
CAO |
CAB |
CAA |
HAB |
180.0 |
180.0 |
CAB |
CAA |
NAL |
NAK |
359.8 |
359.7 |
CAB |
CAA |
NAL |
HAK |
179.8 |
180.0 |
NAL |
CAA |
CAB |
HAA |
180.0 |
180.0 |
CAO |
NAK |
NAL |
CAA |
360.0 |
0.4 |
NAL |
CAA |
CAB |
HAB |
180.3 |
180.0 |
CAB |
CAA |
NAL |
HAA |
180.0 |
180.0 |
NAK |
NAL |
CAA |
HAK |
180.0 |
179.8 |
CAA |
NAL |
NAK |
HAK |
180.0 |
180.2 |
NAK |
NAL |
CAA |
HAA |
179.8 |
179.8 |
NAH |
CAC |
HAC |
CAN |
180.0 |
180.2 |
HAC |
CAC |
NAH |
NAM |
180.0 |
179.8 |
HAC |
CAC |
CAN |
CAF |
180.1 |
180.2 |
HAC |
CAC |
CAN |
CAP |
0.0 |
0.1 |
NAH |
NAM |
HAM |
CAF |
180.0 |
179.9 |
HAM |
NAM |
CAF |
CAN |
180.0 |
180.0 |
HAM |
NAM |
CAF |
HAF |
0.0 |
359.9 |
NAM |
CAF |
HAF |
CAN |
180.0 |
180.1 |
HAF |
CAF |
NAM |
HAM |
0.0 |
359.9 |
HAF |
CAF |
CAN |
CAP |
360.0 |
0.1 |
HAG |
CAG |
CAP |
NAI |
179.6 |
180.3 |
CAP |
CAG |
HAG |
NAS |
180.0 |
179.9 |
HAG |
CAG |
NAS |
CAR |
180.1 |
180.0 |
HAG |
CAG |
NAS |
CAQ |
360.0 |
359.9 |
NAI |
CAE |
HAE |
CAR |
180.0 |
180.0 |
HAE |
CAE |
CAR |
NAJ |
0.2 |
359.9 |
NAJ |
CAD |
HAD |
CAQ |
180.0 |
180.1 |
HAD |
CAD |
CAQ |
CAO |
0.9 |
0.1 |
HAB |
CAB |
CAO |
NAK |
179.6 |
180.3 |
CAO |
CAB |
HAB |
CAA |
180.0 |
179.9 |
HAB |
CAB |
CAA |
NAL |
180.3 |
180.0 |
HAB |
CAB |
CAA |
HAA |
0.3 |
359.9 |
CAA |
NAL |
HAK |
NAK |
180.0 |
179.7 |
HAK |
NAL |
CAA |
HAA |
359.8 |
360.0 |
CAB |
CAA |
HAA |
NAL |
180.0 |
180.1 |
HAA |
CAA |
CAB |
HAB |
0.3 |
359.9 |
HAA |
CAA |
NAL |
NAK |
179.8 |
179.8 |
HAA |
CAA |
NAL |
HAK |
359.8 |
-0.0 |