PDB Chemical Component XDN

Ideal Model

Chemical Description

Name PIPERIDINE-3,4,5-TRIOL
Synonyms XYLOSE-DERIVED 1-DEOXY-NOJIRIMYCIN
Formula C5 H11 N O3
Formal charge 0
Molecular weight 133.146 g/mol
Component type NON-POLYMER

Chemical features

Atom count 20
Chiral atom count 3
Chiral atoms C2 C3 C4
Bond count 20
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) (3R,4r,5S)-piperidine-3,4,5-triol
Systematic name (OpenEye OEToolkits) (3R,5S)-piperidine-3,4,5-triol

Chemical Descriptors

Stereo SMILES (CACTVS) O[C@H]1CNC[C@@H](O)[C@@H]1O
SMILES (CACTVS) O[CH]1CNC[CH](O)[CH]1O
Stereo SMILES (OpenEye) C1[C@H](C([C@H](CN1)O)O)O
InChI descriptor InChI=1S/C5H11NO3/c7-3-1-6-2-4(8)5(3)9/h3-9H,1-2H2/t3-,4+,5+
InChIKey descriptor RMCNETIHECSPMZ-SCDXWVJYSA-N

Status Information

Last modified 2021-03-01
Created 2000-08-16
Release status REL
Model PDB code 1FH7
Processing site RCSB