PDB Chemical Component XCZ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for XCZ
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C11 |
C10 |
1.369 |
1.387 |
C11 |
C2 |
1.365 |
1.385 |
C10 |
N9 |
1.334 |
1.323 |
C2 |
C1 |
1.447 |
1.507 |
C2 |
N3 |
1.315 |
1.324 |
C4 |
N9 |
1.330 |
1.319 |
C4 |
N3 |
1.341 |
1.318 |
C4 |
S5 |
1.793 |
1.762 |
N6 |
S5 |
1.618 |
1.655 |
O7 |
S5 |
1.483 |
1.420 |
O8 |
S5 |
1.476 |
1.421 |
C11 |
H11 |
1.080 |
1.080 |
C10 |
H10 |
1.080 |
1.080 |
C1 |
H11C |
1.100 |
1.090 |
C1 |
H12C |
1.100 |
1.090 |
C1 |
H13C |
1.100 |
1.090 |
N6 |
H61 |
1.000 |
0.970 |
N6 |
H62 |
1.000 |
0.970 |
Bond Angles for XCZ
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C10 |
C11 |
C2 |
115.4 |
118.4 |
C11 |
C10 |
N9 |
124.3 |
119.1 |
C10 |
C11 |
H11 |
122.3 |
120.8 |
C11 |
C10 |
H10 |
117.9 |
120.5 |
C11 |
C2 |
C1 |
124.0 |
120.5 |
C11 |
C2 |
N3 |
124.8 |
119.1 |
C2 |
C11 |
H11 |
122.3 |
120.8 |
C10 |
N9 |
C4 |
112.9 |
120.8 |
N9 |
C10 |
H10 |
117.8 |
120.4 |
C1 |
C2 |
N3 |
111.2 |
120.4 |
C2 |
C1 |
H11C |
109.5 |
109.5 |
C2 |
C1 |
H12C |
109.5 |
109.5 |
C2 |
C1 |
H13C |
109.4 |
109.4 |
C2 |
N3 |
C4 |
113.2 |
120.8 |
N9 |
C4 |
N3 |
129.4 |
121.7 |
N9 |
C4 |
S5 |
112.8 |
119.1 |
N3 |
C4 |
S5 |
117.8 |
119.1 |
C4 |
S5 |
N6 |
103.9 |
107.2 |
C4 |
S5 |
O7 |
106.7 |
106.4 |
C4 |
S5 |
O8 |
109.5 |
106.4 |
N6 |
S5 |
O7 |
108.4 |
106.4 |
N6 |
S5 |
O8 |
107.0 |
106.4 |
S5 |
N6 |
H61 |
109.5 |
120.1 |
S5 |
N6 |
H62 |
109.5 |
120.0 |
O7 |
S5 |
O8 |
120.2 |
123.2 |
H11C |
C1 |
H12C |
109.5 |
109.5 |
H11C |
C1 |
H13C |
109.5 |
109.5 |
H12C |
C1 |
H13C |
109.5 |
109.5 |
H61 |
N6 |
H62 |
109.4 |
119.9 |
Torsion Angles for XCZ
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C10 |
C11 |
C2 |
C1 |
181.3 |
180.0 |
C10 |
C11 |
C2 |
N3 |
3.2 |
0.1 |
C2 |
C11 |
C10 |
H11 |
180.0 |
180.2 |
C11 |
C10 |
N9 |
C4 |
359.8 |
360.0 |
N9 |
C10 |
C11 |
H10 |
180.0 |
180.1 |
C2 |
C11 |
C10 |
N9 |
358.0 |
0.0 |
C10 |
C11 |
C2 |
H11 |
180.0 |
179.8 |
C2 |
C11 |
C10 |
H10 |
178.0 |
179.9 |
C1 |
C2 |
C11 |
N3 |
178.2 |
179.9 |
C11 |
C2 |
C1 |
H11C |
181.6 |
90.0 |
C11 |
C2 |
C1 |
H12C |
301.6 |
210.0 |
C11 |
C2 |
C1 |
H13C |
61.6 |
330.0 |
C11 |
C2 |
N3 |
C4 |
358.1 |
359.9 |
N9 |
C10 |
C11 |
C2 |
358.0 |
0.0 |
N9 |
C10 |
C11 |
H11 |
178.0 |
179.8 |
C11 |
C10 |
N9 |
H10 |
180.0 |
179.9 |
C10 |
N9 |
C4 |
N3 |
1.6 |
360.0 |
C10 |
N9 |
C4 |
S5 |
181.2 |
180.0 |
C11 |
C2 |
C1 |
N3 |
181.6 |
180.1 |
C1 |
C2 |
C11 |
H11 |
1.3 |
0.2 |
C1 |
C2 |
N3 |
C4 |
179.7 |
179.9 |
H11C |
C1 |
C2 |
H12C |
240.0 |
240.0 |
H11C |
C1 |
C2 |
H13C |
120.0 |
120.0 |
H12C |
C1 |
C2 |
H13C |
240.0 |
240.0 |
C11 |
C2 |
N3 |
C1 |
178.4 |
179.9 |
N3 |
C2 |
C11 |
H11 |
183.2 |
180.3 |
N3 |
C2 |
C1 |
H11C |
0.0 |
270.0 |
N3 |
C2 |
C1 |
H12C |
120.0 |
30.0 |
N3 |
C2 |
C1 |
H13C |
240.0 |
150.0 |
N9 |
C4 |
N3 |
C2 |
359.3 |
0.1 |
C2 |
N3 |
C4 |
S5 |
179.8 |
180.0 |
C4 |
N9 |
C10 |
H10 |
179.8 |
180.1 |
C2 |
N3 |
C4 |
N9 |
359.3 |
0.1 |
N3 |
C4 |
N9 |
S5 |
180.4 |
179.9 |
N9 |
C4 |
S5 |
N6 |
299.1 |
90.0 |
N9 |
C4 |
S5 |
O7 |
53.5 |
203.5 |
N9 |
C4 |
S5 |
O8 |
185.1 |
336.4 |
N9 |
C4 |
N3 |
S5 |
179.6 |
180.1 |
N3 |
C4 |
S5 |
N6 |
118.7 |
270.0 |
N3 |
C4 |
S5 |
O7 |
233.1 |
23.6 |
N3 |
C4 |
S5 |
O8 |
4.8 |
156.5 |
N9 |
C4 |
S5 |
N3 |
180.4 |
179.9 |
N6 |
S5 |
C4 |
O7 |
245.6 |
246.4 |
N6 |
S5 |
C4 |
O8 |
114.0 |
113.6 |
C4 |
S5 |
N6 |
H61 |
180.0 |
0.0 |
C4 |
S5 |
N6 |
H62 |
300.0 |
180.0 |
O7 |
S5 |
C4 |
O8 |
228.4 |
227.1 |
C4 |
S5 |
N6 |
O7 |
113.2 |
113.5 |
C4 |
S5 |
N6 |
O8 |
244.3 |
246.5 |
O7 |
S5 |
N6 |
O8 |
131.0 |
133.0 |
H61 |
N6 |
S5 |
H62 |
240.0 |
180.0 |
C4 |
S5 |
O7 |
N6 |
248.7 |
245.9 |
C4 |
S5 |
O7 |
O8 |
125.3 |
122.9 |
N6 |
S5 |
O7 |
O8 |
236.7 |
237.0 |
O7 |
S5 |
N6 |
H61 |
66.8 |
246.5 |
O7 |
S5 |
N6 |
H62 |
186.8 |
66.5 |
C4 |
S5 |
O8 |
N6 |
112.0 |
114.1 |
C4 |
S5 |
O8 |
O7 |
236.0 |
237.1 |
N6 |
S5 |
O8 |
O7 |
124.0 |
123.0 |
O8 |
S5 |
N6 |
H61 |
295.8 |
113.5 |
O8 |
S5 |
N6 |
H62 |
55.8 |
293.5 |
C10 |
C11 |
H11 |
C2 |
180.0 |
180.2 |
H11 |
C11 |
C10 |
N9 |
178.0 |
179.8 |
H11 |
C11 |
C10 |
H10 |
358.0 |
359.7 |
H11 |
C11 |
C2 |
C1 |
1.3 |
0.2 |
H11 |
C11 |
C2 |
N3 |
183.2 |
180.3 |
H10 |
C10 |
C11 |
C2 |
178.0 |
179.9 |
C11 |
C10 |
H10 |
N9 |
180.0 |
180.1 |
H10 |
C10 |
C11 |
H11 |
358.0 |
359.7 |
H10 |
C10 |
N9 |
C4 |
179.8 |
180.1 |
H11C |
C1 |
C2 |
N3 |
0.0 |
270.0 |
C2 |
C1 |
H11C |
H12C |
120.0 |
120.0 |
C2 |
C1 |
H11C |
H13C |
240.0 |
240.0 |
H12C |
C1 |
H11C |
H13C |
120.0 |
120.0 |
H12C |
C1 |
C2 |
N3 |
120.0 |
30.0 |
C2 |
C1 |
H12C |
H11C |
240.0 |
240.0 |
C2 |
C1 |
H12C |
H13C |
120.0 |
120.0 |
H11C |
C1 |
H12C |
H13C |
240.0 |
240.0 |
H13C |
C1 |
C2 |
N3 |
240.0 |
150.0 |
C2 |
C1 |
H13C |
H11C |
120.0 |
120.0 |
C2 |
C1 |
H13C |
H12C |
240.0 |
240.0 |
H11C |
C1 |
H13C |
H12C |
120.0 |
120.0 |
H61 |
N6 |
S5 |
O7 |
66.8 |
246.5 |
H61 |
N6 |
S5 |
O8 |
295.8 |
113.5 |
S5 |
N6 |
H61 |
H62 |
120.0 |
180.0 |
H62 |
N6 |
S5 |
O7 |
186.8 |
66.5 |
H62 |
N6 |
S5 |
O8 |
55.8 |
293.5 |
S5 |
N6 |
H62 |
H61 |
240.0 |
180.0 |