PDB Chemical Component XCF

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for XCF

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
N4	C3	1.350	1.384
C3	N5	1.405	1.324
C3	N2	1.397	1.325
N5	C6	1.399	1.329
N2	C1	1.411	1.325
C1	C8	1.365	1.382
C8	C6	1.427	1.397
C8	C9	1.511	1.506
C6	N7	1.349	1.385
C9	C10	1.506	1.507
C10	C11	1.405	1.391
C10	C21	1.388	1.381
C11	C27	1.456	1.478
C11	C12	1.404	1.402
C27	C28	1.334	1.331
C28	C14	1.501	1.506
C14	C24	1.539	1.530
C14	O13	1.436	1.428
C24	C25	1.501	1.531
C24	C26	1.502	1.530
C25	C26	1.503	1.531
O13	C12	1.384	1.358
C12	C15	1.405	1.385
C15	O16	1.388	1.361
C15	C18	1.394	1.392
O16	C17	1.427	1.429
C18	C21	1.395	1.388
C18	O19	1.378	1.359
O19	C20	1.422	1.429
N4	HN4	1.000	0.971
N4	HN4A	1.000	0.970
C1	H1	1.080	1.080
N7	HN7	1.000	0.970
N7	HN7A	1.000	0.969
C9	H9	1.100	1.091
C9	H9A	1.100	1.090
C27	H27	1.080	1.081
C28	H28	1.080	1.081
C14	H14	1.099	1.090
C24	H24	1.099	1.090
C25	H25	1.100	1.090
C25	H25A	1.100	1.089
C26	H26	1.100	1.090
C26	H26A	1.100	1.089
C17	H17	1.100	1.090
C17	H17A	1.100	1.090
C17	H17B	1.099	1.089
C21	H21	1.080	1.080
C20	H20	1.100	1.090
C20	H20A	1.100	1.089
C20	H20B	1.100	1.090

Bond Angles for XCF

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
N4	C3	N5	120.5	119.2
N4	C3	N2	120.8	119.1
C3	N4	HN4	109.5	120.0
C3	N4	HN4A	109.4	120.1
N5	C3	N2	118.7	121.6
C3	N5	C6	119.9	120.6
C3	N2	C1	121.2	120.9
N5	C6	C8	120.6	119.0
N5	C6	N7	115.0	120.5
N2	C1	C8	120.3	119.3
N2	C1	H1	119.8	120.3
C1	C8	C6	119.2	118.5
C1	C8	C9	122.5	120.7
C8	C1	H1	119.9	120.4
C6	C8	C9	118.3	120.8
C8	C6	N7	124.5	120.5
C8	C9	C10	113.0	109.5
C8	C9	H9	108.3	109.5
C8	C9	H9A	107.5	109.5
C6	N7	HN7	109.5	120.0
C6	N7	HN7A	109.5	120.0
C9	C10	C11	121.1	120.2
C9	C10	C21	119.0	120.2
C10	C9	H9	108.3	109.4
C10	C9	H9A	107.5	109.4
C11	C10	C21	119.9	119.7
C10	C11	C27	121.2	121.4
C10	C11	C12	119.8	120.2
C10	C21	C18	120.0	120.3
C10	C21	H21	120.0	119.9
C27	C11	C12	119.0	118.4
C11	C27	C28	121.2	118.1
C11	C27	H27	119.4	121.0
C11	C12	O13	119.0	118.9
C11	C12	C15	120.2	119.7
C27	C28	C14	121.5	120.1
C28	C27	H27	119.4	120.9
C27	C28	H28	119.3	120.0
C28	C14	C24	110.7	109.2
C28	C14	O13	113.5	110.6
C14	C28	H28	119.2	120.0
C28	C14	H14	106.7	109.3
C24	C14	O13	112.0	109.2
C14	C24	C25	118.9	117.5
C14	C24	C26	119.2	117.5
C24	C14	H14	108.3	109.3
C14	C24	H24	91.1	115.5
C14	O13	C12	124.0	117.1
O13	C14	H14	105.2	109.3
C25	C24	C26	60.0	60.0
C24	C25	C26	60.0	60.0
C25	C24	H24	135.1	117.5
C24	C25	H25	130.9	117.4
C24	C25	H25A	136.0	117.5
C24	C26	C25	59.9	60.0
C26	C24	H24	134.9	117.5
C24	C26	H26	130.9	117.4
C24	C26	H26A	136.0	117.5
C26	C25	H25	130.9	117.4
C26	C25	H25A	136.0	117.6
C25	C26	H26	130.9	117.4
C25	C26	H26A	136.0	117.6
O13	C12	C15	120.8	121.4
C12	C15	O16	125.3	120.1
C12	C15	C18	118.9	119.7
O16	C15	C18	115.7	120.2
C15	O16	C17	121.3	117.0
C15	C18	C21	121.1	120.4
C15	C18	O19	117.9	119.8
O16	C17	H17	109.5	109.5
O16	C17	H17A	109.5	109.4
O16	C17	H17B	109.5	109.5
C21	C18	O19	121.1	119.8
C18	C21	H21	120.0	119.8
C18	O19	C20	116.0	117.0
O19	C20	H20	109.5	109.4
O19	C20	H20A	109.5	109.5
O19	C20	H20B	109.5	109.4
HN4	N4	HN4A	109.5	119.9
HN7	N7	HN7A	109.5	120.1
H9	C9	H9A	112.3	109.5
H25	C25	H25A	74.7	115.6
H26	C26	H26A	74.7	115.6
H17	C17	H17A	109.5	109.4
H17	C17	H17B	109.5	109.5
H17A	C17	H17B	109.5	109.5
H20	C20	H20A	109.5	109.5
H20	C20	H20B	109.4	109.5
H20A	C20	H20B	109.5	109.5

Torsion Angles for XCF

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
N5	C3	N4	N2	179.9	180.2
N4	C3	N5	C6	180.9	180.1
N4	C3	N2	C1	178.6	179.9
HN4	N4	C3	HN4A	240.0	180.2
N4	C3	N5	N2	180.1	179.8
N5	C3	N4	HN4	42.5	359.9
N5	C3	N4	HN4A	162.5	179.7
N5	C3	N2	C1	358.6	359.7
C3	N5	C6	C8	0.7	359.9
C3	N5	C6	N7	180.7	180.0
N4	C3	N2	N5	179.9	180.2
N2	C3	N4	HN4	222.6	179.7
N2	C3	N4	HN4A	342.6	359.5
N2	C3	N5	C6	0.8	0.3
C3	N2	C1	C8	0.4	0.1
C3	N2	C1	H1	180.4	179.9
C6	N5	C3	N2	0.8	0.3
C1	C8	C6	N5	358.4	359.8
N5	C6	C8	C9	177.6	180.0
C8	C6	N5	N7	180.0	179.9
N5	C6	N7	HN7	136.0	360.0
N5	C6	N7	HN7A	256.0	180.0
N2	C1	C8	C6	1.1	0.2
N2	C1	C8	C9	181.9	180.0
C8	C1	N2	H1	180.0	180.1
N5	C6	C8	C1	358.4	359.8
N2	C1	C8	H1	180.0	179.9
C6	C8	C1	C9	179.2	180.2
C1	C8	C6	N7	178.3	179.8
C1	C8	C9	C10	354.2	264.8
C1	C8	C9	H9	114.2	24.8
C1	C8	C9	H9A	235.7	144.8
N5	C6	C8	N7	180.0	180.1
C1	C8	C6	C9	180.8	179.8
C6	C8	C1	H1	181.1	180.3
C6	C8	C9	C10	175.0	84.6
C6	C8	C9	H9	295.0	204.6
C6	C8	C9	H9A	56.5	324.6
C8	C6	N7	HN7	316.0	180.1
C8	C6	N7	HN7A	76.0	0.1
C1	C8	C9	C6	179.2	180.2
C9	C8	C1	H1	1.9	0.1
C9	C8	C6	N7	357.6	359.9
C8	C9	C10	C11	79.4	88.0
C8	C9	C10	C21	259.0	267.8
C10	C9	C8	H9	240.0	240.0
C10	C9	C8	H9A	118.4	120.0
H9	C9	C8	H9A	238.4	240.0
N5	C6	N7	C8	180.0	179.9
N7	C6	C8	C9	357.6	359.9
HN7	N7	C6	HN7A	240.0	180.0
C8	C9	C10	H9	120.0	120.0
C8	C9	C10	H9A	241.6	240.0
C11	C10	C9	C21	180.3	180.2
C9	C10	C11	C27	1.0	0.1
C9	C10	C11	C12	181.2	180.0
C9	C10	C21	C18	180.9	179.7
C9	C10	C21	H21	0.9	360.0
H9	C9	C10	H9A	121.6	119.9
C9	C10	C11	C21	179.7	179.8
C11	C10	C9	H9	319.4	328.0
C11	C10	C9	H9A	197.8	208.0
C11	C10	C21	C18	0.5	359.5
C11	C10	C21	H21	180.5	179.8
C27	C11	C10	C12	179.8	180.1
C10	C11	C27	C28	188.1	163.6
C10	C11	C27	H27	8.1	343.5
C10	C11	C12	O13	175.0	180.0
C10	C11	C12	C15	356.2	360.0
C9	C10	C21	C11	180.3	180.2
C21	C10	C9	H9	139.1	147.8
C21	C10	C9	H9A	17.5	27.8
C21	C10	C11	C27	181.3	180.3
C21	C10	C11	C12	1.5	0.2
C15	C18	C21	C10	359.6	0.5
C10	C21	C18	O19	178.3	180.3
C18	C21	C10	H21	180.0	179.7
C27	C11	C10	C21	181.3	180.3
C10	C11	C27	C12	180.2	179.9
C27	C11	C12	O13	355.2	360.0
C27	C11	C12	C15	176.4	179.9
C11	C27	C28	C14	0.4	359.4
C28	C27	C11	H27	180.0	180.1
C11	C27	C28	H28	180.4	179.3
C12	C11	C10	C21	1.5	0.2
C10	C11	C12	C27	179.8	180.1
C12	C11	C27	C28	7.9	343.7
C12	C11	C27	H27	187.9	163.6
C14	O13	C12	C11	353.0	33.6
O13	C12	C11	C15	178.8	180.0
C11	C12	C15	O16	181.3	180.0
C11	C12	C15	C18	3.9	0.1
C28	C27	C11	C12	7.9	343.7
C11	C27	C28	H27	180.0	179.9
C27	C28	C14	C24	222.2	270.9
C27	C28	C14	O13	349.1	31.2
C14	C28	C27	H28	180.0	180.1
C27	C28	C14	H14	104.5	151.5
C14	C28	C27	H27	180.5	179.5
C27	C28	C14	H28	180.0	179.9
C24	C14	C28	O13	233.1	239.8
C28	C14	C24	C25	168.4	294.7
C28	C14	C24	C26	98.6	226.1
C24	C14	C28	H14	117.7	119.5
C28	C14	C24	H24	313.5	80.4
C28	C14	O13	C12	14.4	312.0
O13	C14	C28	H14	244.6	239.7
C28	C14	C24	O13	127.7	121.1
C24	C14	C28	H28	42.2	91.0
C28	C14	C24	H14	243.4	240.5
C24	C14	O13	C12	140.7	72.3
O13	C14	C24	H14	115.6	119.5
C25	C24	C14	C26	69.8	68.6
C14	C24	C25	C26	251.0	252.5
C25	C24	C14	H24	214.9	214.4
C14	C24	C25	H25	11.1	359.9
C14	C24	C25	H25A	124.3	145.0
C14	C24	C26	C25	108.5	107.5
C26	C24	C14	H24	145.0	145.7
C14	C24	C26	H26	228.5	215.0
C14	C24	C26	H26A	341.8	359.9
C11	C12	O13	C14	353.0	33.6
C28	C14	O13	C24	233.8	239.7
O13	C14	C28	H28	169.1	211.3
C28	C14	O13	H14	116.3	120.3
O13	C14	C24	C25	40.7	173.7
O13	C14	C24	C26	330.8	105.0
C24	C14	O13	H14	242.5	240.5
O13	C14	C24	H24	185.8	319.3
C14	O13	C12	C15	171.8	213.7
C25	C24	C14	O13	40.7	173.7
C25	C24	C14	H14	285.1	54.2
C14	C24	C25	H24	125.9	145.0
C25	C24	C26	C25	360.0	360.0
C26	C24	C25	H24	234.9	252.5
C25	C24	C26	H26	120.0	107.4
C25	C24	C26	H26A	233.3	252.4
C26	C25	C24	H25	240.0	252.6
C26	C25	C24	H25A	126.7	107.6
C24	C25	C26	H26	240.0	252.6
C24	C25	C26	H26A	126.7	107.5
H25	C25	C24	H25A	246.8	215.0
C26	C24	C14	O13	330.8	105.0
C26	C24	C14	H14	215.2	345.6
C14	C24	C26	H24	234.0	215.0
C26	C24	C25	C26	360.0	360.0
C25	C24	C26	H24	125.5	107.4
C26	C24	C25	H25	120.0	107.4
C26	C24	C25	H25A	233.3	252.4
C24	C26	C25	H25	240.0	252.6
C24	C26	C25	H25A	126.7	107.5
C25	C26	C24	H26	240.0	252.6
C25	C26	C24	H26A	126.7	107.6
H26	C26	C24	H26A	246.7	215.0
C26	C25	C24	C26	-0.0	360.0
C26	C25	C24	H24	125.1	107.5
C24	C25	C26	H25	120.0	107.4
C24	C25	C26	H25A	233.3	252.5
C25	C26	C24	H24	234.5	252.6
C24	C26	C25	H26	120.0	107.4
C24	C26	C25	H26A	233.3	252.5
H25	C25	C26	H25A	113.3	145.1
H26	C26	C25	H26A	113.3	145.1
C11	C12	O13	C15	181.2	179.9
C12	O13	C14	H14	258.2	191.7
O13	C12	C15	O16	2.5	359.9
O13	C12	C15	C18	185.1	180.0
C11	C12	C15	O13	178.8	180.1
O16	C15	C12	C18	177.3	179.9
C12	C15	O16	C17	48.7	92.7
C12	C15	C18	C21	358.1	359.7
C12	C15	C18	O19	179.4	180.0
C12	C15	O16	C18	182.6	180.1
O16	C15	C18	C21	180.5	179.8
O16	C15	C18	O19	1.8	0.0
C15	O16	C17	H17	2.4	303.5
C15	O16	C17	H17A	122.5	63.4
C15	O16	C17	H17B	242.4	183.5
C10	C21	C18	C15	359.6	0.5
C12	C15	C18	O16	177.6	179.9
C18	C15	O16	C17	226.1	272.6
C21	C18	C15	O19	178.7	179.7
C15	C18	C21	H21	179.6	180.3
C15	C18	O19	C20	174.0	180.0
C17	O16	C15	C18	226.1	272.6
H17	C17	O16	H17A	240.0	240.0
H17	C17	O16	H17B	120.0	120.0
H17A	C17	O16	H17B	240.0	240.0
C10	C21	C18	H21	180.0	180.3
C15	C18	C21	O19	181.3	180.3
C21	C18	O19	C20	355.3	0.2
C15	C18	O19	C21	178.7	179.7
O19	C18	C21	H21	358.3	0.0
C18	O19	C20	H20	153.8	300.0
C18	O19	C20	H20A	273.8	60.0
C18	O19	C20	H20B	33.8	180.0
H20	C20	O19	H20A	240.0	240.0
H20	C20	O19	H20B	120.0	119.9
H20A	C20	O19	H20B	240.0	240.0
HN4	N4	C3	N5	42.5	359.9
HN4	N4	C3	N2	222.6	179.7
C3	N4	HN4	HN4A	120.0	179.8
HN4A	N4	C3	N5	162.5	179.7
HN4A	N4	C3	N2	342.6	359.5
C3	N4	HN4A	HN4	240.0	180.2
N2	C1	H1	C8	180.0	180.1
H1	C1	C8	C6	181.1	180.3
H1	C1	C8	C9	1.9	0.1
C6	N7	HN7	HN7A	120.0	180.0
C6	N7	HN7A	HN7	240.0	180.0
C8	C9	H9	C10	237.1	240.0
C8	C9	H9	H9A	118.6	120.1
H9	C9	C10	C11	319.4	328.0
H9	C9	C10	C21	139.1	147.8
C10	C9	H9	H9A	241.5	240.1
C8	C9	H9A	C10	122.0	120.0
C8	C9	H9A	H9	241.0	239.9
H9A	C9	C10	C11	197.8	208.0
H9A	C9	C10	C21	17.5	27.8
C10	C9	H9A	H9	119.0	119.9
H27	C27	C11	C12	187.9	163.6
C11	C27	H27	C28	180.0	180.1
H27	C27	C28	C14	180.5	179.5
H27	C27	C28	H28	0.5	359.4
C27	C28	H28	C14	180.0	180.1
H28	C28	C27	H27	0.5	359.4
H28	C28	C14	C24	42.2	91.0
H28	C28	C14	O13	169.1	211.3
H28	C28	C14	H14	284.5	331.6
C28	C14	H14	C24	119.2	119.5
C28	C14	H14	O13	239.1	238.9
H14	C14	C28	H28	284.5	331.6
C24	C14	H14	O13	119.9	119.4
H14	C14	C24	C25	285.1	54.2
H14	C14	C24	C26	215.2	345.6
H14	C14	C24	H24	70.2	199.9
H14	C14	O13	C12	258.2	191.7
H24	C24	C14	O13	185.8	319.3
C14	C24	H24	C25	225.2	214.3
C14	C24	H24	C26	135.1	145.7
H24	C24	C14	H14	70.2	199.9
C25	C24	H24	C26	269.9	291.4
H24	C24	C25	C26	125.1	107.5
H24	C24	C25	H25	245.2	215.0
H24	C24	C25	H25A	358.4	360.0
H24	C24	C26	C25	234.5	252.6
H24	C24	C26	H26	354.5	360.0
H24	C24	C26	H26A	107.8	145.0
H25	C25	C24	C26	120.0	107.4
C24	C25	H25	C26	277.1	291.4
H25	C25	C24	H24	245.2	215.0
C24	C25	H25	H25A	138.5	145.7
C26	C25	H25	H25A	221.4	214.3
H25	C25	C26	H26	120.0	145.1
H25	C25	C26	H26A	6.7	0.0
H25A	C25	C24	C26	233.3	252.4
C24	C25	H25A	C26	92.1	68.7
H25A	C25	C24	H24	358.4	360.0
C24	C25	H25A	H25	226.1	214.3
C26	C25	H25A	H25	134.0	145.7
H25A	C25	C26	H26	6.7	0.1
H25A	C25	C26	H26A	253.4	215.0
C24	C26	H26	C25	277.2	291.4
H26	C26	C24	H24	354.5	360.0
C24	C26	H26	H26A	138.6	145.6
H26	C26	C25	H25	120.0	145.1
H26	C26	C25	H25A	6.7	0.1
C25	C26	H26	H26A	221.4	214.2
C24	C26	H26A	C25	92.0	68.6
H26A	C26	C24	H24	107.8	145.0
C24	C26	H26A	H26	226.0	214.4
H26A	C26	C25	H25	6.7	0.0
H26A	C26	C25	H25A	253.4	215.0
C25	C26	H26A	H26	134.0	145.7
O16	C17	H17	H17A	120.0	120.0
O16	C17	H17	H17B	240.0	240.0
H17A	C17	H17	H17B	120.0	120.0
O16	C17	H17A	H17	240.0	240.0
O16	C17	H17A	H17B	120.0	120.0
H17	C17	H17A	H17B	240.0	240.0
O16	C17	H17B	H17	120.0	120.0
O16	C17	H17B	H17A	240.0	240.0
H17	C17	H17B	H17A	120.0	120.0
C10	C21	H21	C18	180.0	179.7
H21	C21	C18	O19	358.3	0.0
O19	C20	H20	H20A	120.0	120.0
O19	C20	H20	H20B	240.0	240.1
H20A	C20	H20	H20B	120.0	120.1
O19	C20	H20A	H20	240.0	240.0
O19	C20	H20A	H20B	120.0	120.0
H20	C20	H20A	H20B	240.0	240.0
O19	C20	H20B	H20	120.0	119.9
O19	C20	H20B	H20A	240.0	240.0
H20	C20	H20B	H20A	120.0	120.0