PDB Chemical Component XAN

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for XAN

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N9 C4 1.375 1.359
N9 C8 1.364 1.364
N9 HN9 1.020 0.970
C4 N3 1.346 1.375
C4 C5 1.372 1.389
N3 C2 1.365 1.344
N3 HN3 1.020 0.969
C2 O2 1.239 1.216
C2 N1 1.403 1.343
N1 C6 1.385 1.351
N1 HN1 1.020 0.970
C6 O6 1.232 1.217
C6 C5 1.424 1.463
C5 N7 1.380 1.355
N7 C8 1.306 1.301
C8 H8 1.103 1.080

Bond Angles for XAN

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C4 N9 C8 105.3 107.6
C4 N9 HN9 127.6 126.2
N9 C4 N3 124.7 134.4
N9 C4 C5 106.8 106.4
C8 N9 HN9 127.1 126.2
N9 C8 N7 113.4 109.5
N9 C8 H8 125.2 125.2
N3 C4 C5 128.4 119.2
C4 N3 C2 112.8 120.8
C4 N3 HN3 111.0 119.6
C4 C5 C6 120.6 118.4
C4 C5 N7 109.6 107.4
C2 N3 HN3 111.0 119.6
N3 C2 O2 119.8 118.9
N3 C2 N1 120.7 122.3
O2 C2 N1 119.5 118.8
C2 N1 C6 127.3 120.9
C2 N1 HN1 117.1 119.5
C6 N1 HN1 115.6 119.5
N1 C6 O6 120.9 120.7
N1 C6 C5 110.2 118.4
O6 C6 C5 128.9 120.8
C6 C5 N7 129.7 134.2
C5 N7 C8 105.0 109.1
N7 C8 H8 121.4 125.3

Torsion Angles for XAN

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C8 N9 C4 HN9 179.9 180.1
C4 N9 C8 N7 359.9 359.9
C4 N9 C8 H8 180.0 180.0
N3 C4 N9 C5 182.9 180.1
N9 C4 N3 C2 175.3 180.2
N9 C4 N3 HN3 50.0 0.2
N9 C4 C5 C6 184.4 180.0
N9 C4 C5 N7 0.8 360.0
C4 N9 C8 HN9 180.1 179.9
C8 N9 C4 N3 182.4 180.2
C8 N9 C4 C5 359.5 0.1
C5 N7 C8 N9 0.5 0.0
N7 C8 N9 H8 180.0 180.0
C4 N9 HN9 C8 179.9 180.1
HN9 N9 C4 N3 2.5 0.1
HN9 N9 C4 C5 179.6 180.0
HN9 N9 C8 N7 179.9 180.0
HN9 N9 C8 H8 359.9 0.1
N3 C4 N9 C8 182.4 180.2
N3 C4 N9 HN9 2.5 0.1
N9 C4 N3 C5 176.5 179.9
N3 C4 C5 C6 1.4 359.9
N3 C4 C5 N7 177.8 179.9
C2 N3 C4 HN3 125.3 180.0
C4 N3 C2 O2 182.4 179.8
C4 N3 C2 N1 1.2 359.6
C5 C4 N9 C8 359.5 0.1
C5 C4 N9 HN9 179.6 180.0
N9 C4 C5 N3 183.0 180.1
C5 C4 N3 C2 358.8 0.3
C5 C4 N3 HN3 233.5 180.3
N1 C6 C5 C4 358.6 360.0
O6 C6 C5 C4 177.5 180.0
C6 C5 C4 N7 183.6 180.0
C4 C5 N7 C8 359.2 360.0
C2 N3 C4 C5 358.8 0.3
C4 N3 C2 HN3 234.7 180.0
O2 C2 N3 N1 181.2 180.3
N3 C2 N1 C6 358.4 0.3
N3 C2 N1 HN1 178.4 180.2
HN3 N3 C4 C5 233.5 180.3
C4 N3 HN3 C2 126.3 180.0
HN3 N3 C2 O2 307.7 359.9
HN3 N3 C2 N1 126.5 179.6
O2 C2 N3 HN3 307.7 359.9
N3 C2 O2 N1 178.8 179.8
O2 C2 N1 C6 177.2 180.0
O2 C2 N1 HN1 357.2 360.0
N1 C2 N3 HN3 126.5 179.6
N3 C2 N1 O2 181.2 180.3
C6 N1 C2 HN1 180.0 180.0
C2 N1 C6 O6 182.6 180.0
C2 N1 C6 C5 1.6 360.0
C4 C5 C6 N1 358.6 360.0
C2 N1 C6 HN1 180.0 180.0
O6 C6 N1 C5 181.0 180.0
N1 C6 C5 N7 183.1 180.0
C2 N1 HN1 C6 180.0 180.0
HN1 N1 C6 O6 2.6 360.0
HN1 N1 C6 C5 181.6 180.0
C4 C5 C6 O6 177.5 180.0
O6 C6 N1 HN1 2.6 -0.0
N1 C6 O6 C5 178.8 180.0
O6 C6 C5 N7 1.9 -0.0
C4 C5 C6 N7 175.6 180.0
C5 C6 N1 HN1 181.6 180.0
N1 C6 C5 O6 181.1 180.0
C6 C5 N7 C8 175.1 180.0
N9 C8 N7 C5 0.5 0.0
C4 C5 N7 C6 184.1 180.0
C5 N7 C8 H8 180.5 180.0
N7 C8 N9 HN9 179.9 180.0
N9 C8 N7 H8 180.0 180.0
H8 C8 N9 HN9 359.9 0.1
N9 C8 H8 N7 180.0 179.9