PDB Chemical Component XAN
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for XAN
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N9 |
C4 |
1.375 |
1.359 |
N9 |
C8 |
1.364 |
1.364 |
N9 |
HN9 |
1.020 |
0.970 |
C4 |
N3 |
1.346 |
1.375 |
C4 |
C5 |
1.372 |
1.389 |
N3 |
C2 |
1.365 |
1.344 |
N3 |
HN3 |
1.020 |
0.969 |
C2 |
O2 |
1.239 |
1.216 |
C2 |
N1 |
1.403 |
1.343 |
N1 |
C6 |
1.385 |
1.351 |
N1 |
HN1 |
1.020 |
0.970 |
C6 |
O6 |
1.232 |
1.217 |
C6 |
C5 |
1.424 |
1.463 |
C5 |
N7 |
1.380 |
1.355 |
N7 |
C8 |
1.306 |
1.301 |
C8 |
H8 |
1.103 |
1.080 |
Bond Angles for XAN
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C4 |
N9 |
C8 |
105.3 |
107.6 |
C4 |
N9 |
HN9 |
127.6 |
126.2 |
N9 |
C4 |
N3 |
124.7 |
134.4 |
N9 |
C4 |
C5 |
106.8 |
106.4 |
C8 |
N9 |
HN9 |
127.1 |
126.2 |
N9 |
C8 |
N7 |
113.4 |
109.5 |
N9 |
C8 |
H8 |
125.2 |
125.2 |
N3 |
C4 |
C5 |
128.4 |
119.2 |
C4 |
N3 |
C2 |
112.8 |
120.8 |
C4 |
N3 |
HN3 |
111.0 |
119.6 |
C4 |
C5 |
C6 |
120.6 |
118.4 |
C4 |
C5 |
N7 |
109.6 |
107.4 |
C2 |
N3 |
HN3 |
111.0 |
119.6 |
N3 |
C2 |
O2 |
119.8 |
118.9 |
N3 |
C2 |
N1 |
120.7 |
122.3 |
O2 |
C2 |
N1 |
119.5 |
118.8 |
C2 |
N1 |
C6 |
127.3 |
120.9 |
C2 |
N1 |
HN1 |
117.1 |
119.5 |
C6 |
N1 |
HN1 |
115.6 |
119.5 |
N1 |
C6 |
O6 |
120.9 |
120.7 |
N1 |
C6 |
C5 |
110.2 |
118.4 |
O6 |
C6 |
C5 |
128.9 |
120.8 |
C6 |
C5 |
N7 |
129.7 |
134.2 |
C5 |
N7 |
C8 |
105.0 |
109.1 |
N7 |
C8 |
H8 |
121.4 |
125.3 |
Torsion Angles for XAN
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C8 |
N9 |
C4 |
HN9 |
179.9 |
180.1 |
C4 |
N9 |
C8 |
N7 |
359.9 |
359.9 |
C4 |
N9 |
C8 |
H8 |
180.0 |
180.0 |
N3 |
C4 |
N9 |
C5 |
182.9 |
180.1 |
N9 |
C4 |
N3 |
C2 |
175.3 |
180.2 |
N9 |
C4 |
N3 |
HN3 |
50.0 |
0.2 |
N9 |
C4 |
C5 |
C6 |
184.4 |
180.0 |
N9 |
C4 |
C5 |
N7 |
0.8 |
360.0 |
C4 |
N9 |
C8 |
HN9 |
180.1 |
179.9 |
C8 |
N9 |
C4 |
N3 |
182.4 |
180.2 |
C8 |
N9 |
C4 |
C5 |
359.5 |
0.1 |
C5 |
N7 |
C8 |
N9 |
0.5 |
0.0 |
N7 |
C8 |
N9 |
H8 |
180.0 |
180.0 |
C4 |
N9 |
HN9 |
C8 |
179.9 |
180.1 |
HN9 |
N9 |
C4 |
N3 |
2.5 |
0.1 |
HN9 |
N9 |
C4 |
C5 |
179.6 |
180.0 |
HN9 |
N9 |
C8 |
N7 |
179.9 |
180.0 |
HN9 |
N9 |
C8 |
H8 |
359.9 |
0.1 |
N3 |
C4 |
N9 |
C8 |
182.4 |
180.2 |
N3 |
C4 |
N9 |
HN9 |
2.5 |
0.1 |
N9 |
C4 |
N3 |
C5 |
176.5 |
179.9 |
N3 |
C4 |
C5 |
C6 |
1.4 |
359.9 |
N3 |
C4 |
C5 |
N7 |
177.8 |
179.9 |
C2 |
N3 |
C4 |
HN3 |
125.3 |
180.0 |
C4 |
N3 |
C2 |
O2 |
182.4 |
179.8 |
C4 |
N3 |
C2 |
N1 |
1.2 |
359.6 |
C5 |
C4 |
N9 |
C8 |
359.5 |
0.1 |
C5 |
C4 |
N9 |
HN9 |
179.6 |
180.0 |
N9 |
C4 |
C5 |
N3 |
183.0 |
180.1 |
C5 |
C4 |
N3 |
C2 |
358.8 |
0.3 |
C5 |
C4 |
N3 |
HN3 |
233.5 |
180.3 |
N1 |
C6 |
C5 |
C4 |
358.6 |
360.0 |
O6 |
C6 |
C5 |
C4 |
177.5 |
180.0 |
C6 |
C5 |
C4 |
N7 |
183.6 |
180.0 |
C4 |
C5 |
N7 |
C8 |
359.2 |
360.0 |
C2 |
N3 |
C4 |
C5 |
358.8 |
0.3 |
C4 |
N3 |
C2 |
HN3 |
234.7 |
180.0 |
O2 |
C2 |
N3 |
N1 |
181.2 |
180.3 |
N3 |
C2 |
N1 |
C6 |
358.4 |
0.3 |
N3 |
C2 |
N1 |
HN1 |
178.4 |
180.2 |
HN3 |
N3 |
C4 |
C5 |
233.5 |
180.3 |
C4 |
N3 |
HN3 |
C2 |
126.3 |
180.0 |
HN3 |
N3 |
C2 |
O2 |
307.7 |
359.9 |
HN3 |
N3 |
C2 |
N1 |
126.5 |
179.6 |
O2 |
C2 |
N3 |
HN3 |
307.7 |
359.9 |
N3 |
C2 |
O2 |
N1 |
178.8 |
179.8 |
O2 |
C2 |
N1 |
C6 |
177.2 |
180.0 |
O2 |
C2 |
N1 |
HN1 |
357.2 |
360.0 |
N1 |
C2 |
N3 |
HN3 |
126.5 |
179.6 |
N3 |
C2 |
N1 |
O2 |
181.2 |
180.3 |
C6 |
N1 |
C2 |
HN1 |
180.0 |
180.0 |
C2 |
N1 |
C6 |
O6 |
182.6 |
180.0 |
C2 |
N1 |
C6 |
C5 |
1.6 |
360.0 |
C4 |
C5 |
C6 |
N1 |
358.6 |
360.0 |
C2 |
N1 |
C6 |
HN1 |
180.0 |
180.0 |
O6 |
C6 |
N1 |
C5 |
181.0 |
180.0 |
N1 |
C6 |
C5 |
N7 |
183.1 |
180.0 |
C2 |
N1 |
HN1 |
C6 |
180.0 |
180.0 |
HN1 |
N1 |
C6 |
O6 |
2.6 |
360.0 |
HN1 |
N1 |
C6 |
C5 |
181.6 |
180.0 |
C4 |
C5 |
C6 |
O6 |
177.5 |
180.0 |
O6 |
C6 |
N1 |
HN1 |
2.6 |
-0.0 |
N1 |
C6 |
O6 |
C5 |
178.8 |
180.0 |
O6 |
C6 |
C5 |
N7 |
1.9 |
-0.0 |
C4 |
C5 |
C6 |
N7 |
175.6 |
180.0 |
C5 |
C6 |
N1 |
HN1 |
181.6 |
180.0 |
N1 |
C6 |
C5 |
O6 |
181.1 |
180.0 |
C6 |
C5 |
N7 |
C8 |
175.1 |
180.0 |
N9 |
C8 |
N7 |
C5 |
0.5 |
0.0 |
C4 |
C5 |
N7 |
C6 |
184.1 |
180.0 |
C5 |
N7 |
C8 |
H8 |
180.5 |
180.0 |
N7 |
C8 |
N9 |
HN9 |
179.9 |
180.0 |
N9 |
C8 |
N7 |
H8 |
180.0 |
180.0 |
H8 |
C8 |
N9 |
HN9 |
359.9 |
0.1 |
N9 |
C8 |
H8 |
N7 |
180.0 |
179.9 |