PDB Chemical Component XA0
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for XA0
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N01 |
C06 |
1.300 |
1.388 |
| N01 |
C11 |
1.493 |
1.466 |
| N01 |
HN01 |
1.000 |
0.970 |
| N02 |
C10 |
1.374 |
1.348 |
| N02 |
H102 |
1.000 |
0.970 |
| N02 |
H202 |
1.000 |
0.970 |
| N03 |
O20 |
1.323 |
1.218 |
| C04 |
C09 |
1.435 |
1.377 |
| C04 |
H04 |
1.080 |
1.080 |
| C05 |
C04 |
1.433 |
1.397 |
| C05 |
C06 |
1.441 |
1.405 |
| C06 |
C07 |
1.425 |
1.389 |
| C07 |
C08 |
1.406 |
1.381 |
| C07 |
H07 |
1.080 |
1.080 |
| C08 |
CL21 |
1.727 |
1.736 |
| C09 |
N03 |
1.291 |
1.481 |
| C09 |
C08 |
1.447 |
1.386 |
| C10 |
C05 |
1.385 |
1.473 |
| C11 |
C12 |
1.514 |
1.507 |
| C11 |
H111 |
1.100 |
1.090 |
| C11 |
H211 |
1.100 |
1.090 |
| C12 |
C13 |
1.423 |
1.383 |
| C13 |
C14 |
1.423 |
1.384 |
| C13 |
H13 |
1.080 |
1.080 |
| C14 |
F23 |
1.321 |
1.351 |
| C15 |
C14 |
1.422 |
1.387 |
| C15 |
F24 |
1.329 |
1.351 |
| C16 |
C15 |
1.421 |
1.386 |
| C17 |
C12 |
1.421 |
1.382 |
| C17 |
C16 |
1.420 |
1.384 |
| C17 |
H17 |
1.080 |
1.080 |
| O18 |
C10 |
1.216 |
1.216 |
| O19 |
N03 |
1.320 |
1.219 |
| F22 |
C16 |
1.313 |
1.351 |
Bond Angles for XA0
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C06 |
N01 |
C11 |
123.6 |
120.0 |
| C06 |
N01 |
HN01 |
105.0 |
120.0 |
| N01 |
C06 |
C05 |
120.6 |
120.2 |
| N01 |
C06 |
C07 |
120.3 |
120.2 |
| C11 |
N01 |
HN01 |
105.0 |
120.0 |
| N01 |
C11 |
C12 |
110.0 |
109.5 |
| N01 |
C11 |
H111 |
109.3 |
109.4 |
| N01 |
C11 |
H211 |
109.3 |
109.5 |
| C10 |
N02 |
H102 |
120.0 |
120.0 |
| C10 |
N02 |
H202 |
120.0 |
120.0 |
| N02 |
C10 |
C05 |
120.5 |
120.0 |
| H102 |
N02 |
H202 |
120.0 |
120.0 |
| C09 |
N03 |
O20 |
121.0 |
120.0 |
| O19 |
N03 |
O20 |
118.2 |
120.0 |
| C09 |
C04 |
H04 |
119.3 |
120.0 |
| C05 |
C04 |
C09 |
121.3 |
120.0 |
| C04 |
C09 |
C08 |
118.5 |
120.4 |
| C05 |
C04 |
H04 |
119.3 |
120.0 |
| C05 |
C06 |
C07 |
119.1 |
119.6 |
| C06 |
C07 |
C08 |
122.0 |
120.0 |
| C06 |
C07 |
H07 |
119.0 |
119.9 |
| C08 |
C07 |
H07 |
119.0 |
120.0 |
| C07 |
C08 |
CL21 |
117.1 |
119.8 |
| C09 |
C08 |
CL21 |
123.0 |
119.8 |
| C12 |
C11 |
H111 |
109.3 |
109.5 |
| C12 |
C11 |
H211 |
109.3 |
109.5 |
| C11 |
C12 |
C13 |
119.9 |
119.9 |
| H111 |
C11 |
H211 |
109.7 |
109.5 |
| C12 |
C13 |
C14 |
120.1 |
120.0 |
| C12 |
C13 |
H13 |
119.9 |
120.0 |
| C14 |
C13 |
H13 |
120.0 |
120.0 |
| C13 |
C14 |
F23 |
119.9 |
120.0 |
| C15 |
C14 |
F23 |
120.1 |
120.0 |
| C16 |
C15 |
F24 |
119.9 |
120.1 |
Torsion Angles for XA0
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C11 |
N01 |
C06 |
HN01 |
240.0 |
180.3 |
| C06 |
N01 |
C11 |
C12 |
95.4 |
180.0 |
| C06 |
N01 |
C11 |
H111 |
215.4 |
300.0 |
| C06 |
N01 |
C11 |
H211 |
335.4 |
60.0 |
| C05 |
C06 |
N01 |
C07 |
180.4 |
180.0 |
| N01 |
C06 |
C07 |
C08 |
180.0 |
180.0 |
| N01 |
C06 |
C07 |
H07 |
0.0 |
359.9 |
| C06 |
N01 |
C11 |
HN01 |
120.0 |
179.7 |
| C11 |
N01 |
C06 |
C05 |
152.1 |
174.4 |
| C11 |
N01 |
C06 |
C07 |
331.7 |
354.4 |
| C12 |
C11 |
N01 |
H111 |
240.0 |
240.0 |
| C12 |
C11 |
N01 |
H211 |
120.0 |
120.0 |
| N01 |
C11 |
C12 |
C13 |
225.3 |
90.0 |
| H111 |
C11 |
N01 |
H211 |
240.0 |
240.0 |
| C06 |
N01 |
HN01 |
C11 |
228.3 |
180.3 |
| HN01 |
N01 |
C06 |
C05 |
272.1 |
354.1 |
| HN01 |
N01 |
C06 |
C07 |
91.7 |
174.1 |
| HN01 |
N01 |
C11 |
C12 |
335.4 |
0.3 |
| HN01 |
N01 |
C11 |
H111 |
95.4 |
120.3 |
| HN01 |
N01 |
C11 |
H211 |
215.4 |
240.3 |
| H102 |
N02 |
C10 |
H202 |
180.0 |
180.1 |
| C10 |
N02 |
H102 |
H202 |
180.0 |
179.9 |
| H102 |
N02 |
C10 |
C05 |
181.3 |
0.0 |
| C10 |
N02 |
H202 |
H102 |
180.0 |
180.1 |
| H202 |
N02 |
C10 |
C05 |
1.3 |
180.0 |
| C04 |
C09 |
N03 |
O20 |
215.4 |
0.1 |
| C05 |
C04 |
C09 |
H04 |
180.0 |
179.7 |
| C04 |
C09 |
C08 |
CL21 |
180.8 |
180.0 |
| C05 |
C04 |
H04 |
C09 |
180.0 |
180.3 |
| H04 |
C04 |
C09 |
C08 |
179.7 |
180.3 |
| N01 |
C06 |
C05 |
C04 |
180.3 |
180.0 |
| N02 |
C10 |
C05 |
C04 |
24.8 |
5.9 |
| C09 |
C04 |
C05 |
H04 |
180.0 |
180.3 |
| C05 |
C04 |
C09 |
C08 |
359.7 |
0.0 |
| C05 |
C06 |
N01 |
C11 |
152.1 |
174.4 |
| C05 |
C06 |
N01 |
HN01 |
272.1 |
354.1 |
| N01 |
C06 |
C05 |
C07 |
179.6 |
180.0 |
| N02 |
C10 |
C05 |
C06 |
204.6 |
185.9 |
| C06 |
C05 |
C04 |
C09 |
359.6 |
360.0 |
| C06 |
C05 |
C04 |
H04 |
179.6 |
179.7 |
| C05 |
C06 |
C07 |
C08 |
359.6 |
0.1 |
| C05 |
C06 |
C07 |
H07 |
179.6 |
180.0 |
| C07 |
C06 |
N01 |
C11 |
331.7 |
354.4 |
| C07 |
C06 |
N01 |
HN01 |
91.7 |
174.1 |
| N01 |
C06 |
C07 |
C05 |
180.4 |
180.0 |
| C08 |
C07 |
C06 |
H07 |
180.0 |
180.1 |
| C06 |
C07 |
C08 |
CL21 |
179.6 |
180.0 |
| C04 |
C09 |
C08 |
C07 |
0.7 |
0.0 |
| C06 |
C07 |
C08 |
H07 |
180.0 |
179.9 |
| C09 |
C08 |
C07 |
CL21 |
180.1 |
179.9 |
| C06 |
C07 |
H07 |
C08 |
180.0 |
180.1 |
| H07 |
C07 |
C08 |
CL21 |
359.6 |
0.1 |
| CL21 |
C08 |
C07 |
H07 |
359.6 |
0.1 |
| O19 |
N03 |
C09 |
O20 |
177.6 |
179.9 |
| C08 |
C09 |
N03 |
O20 |
35.5 |
179.8 |
| C08 |
C09 |
C04 |
H04 |
179.7 |
180.3 |
| C09 |
C08 |
C07 |
H07 |
179.7 |
180.0 |
| C07 |
C08 |
C09 |
CL21 |
179.9 |
180.1 |
| C05 |
C10 |
N02 |
H102 |
181.3 |
0.0 |
| C05 |
C10 |
N02 |
H202 |
1.3 |
180.0 |
| C10 |
C05 |
C04 |
H04 |
359.5 |
359.7 |
| C12 |
C11 |
N01 |
HN01 |
335.4 |
0.3 |
| N01 |
C11 |
C12 |
H111 |
120.0 |
120.0 |
| N01 |
C11 |
C12 |
H211 |
240.0 |
240.0 |
| H111 |
C11 |
C12 |
H211 |
120.0 |
120.0 |
| C11 |
C12 |
C13 |
C14 |
179.6 |
180.0 |
| C11 |
C12 |
C13 |
H13 |
359.6 |
360.0 |
| H111 |
C11 |
N01 |
HN01 |
95.4 |
120.3 |
| N01 |
C11 |
H111 |
C12 |
239.6 |
240.0 |
| N01 |
C11 |
H111 |
H211 |
119.8 |
120.0 |
| C12 |
C11 |
H111 |
H211 |
240.2 |
240.0 |
| H111 |
C11 |
C12 |
C13 |
105.3 |
330.0 |
| H211 |
C11 |
N01 |
HN01 |
215.4 |
240.3 |
| N01 |
C11 |
H211 |
C12 |
120.4 |
120.0 |
| N01 |
C11 |
H211 |
H111 |
240.2 |
240.0 |
| C12 |
C11 |
H211 |
H111 |
119.8 |
120.0 |
| H211 |
C11 |
C12 |
C13 |
345.3 |
210.0 |
| C13 |
C12 |
C11 |
H111 |
105.3 |
330.0 |
| C13 |
C12 |
C11 |
H211 |
345.3 |
210.0 |
| C14 |
C13 |
C12 |
H13 |
180.0 |
180.0 |
| C12 |
C13 |
C14 |
F23 |
180.2 |
180.0 |
| C12 |
C13 |
C14 |
H13 |
180.0 |
180.0 |
| C15 |
C14 |
C13 |
F23 |
179.8 |
180.0 |
| C12 |
C13 |
H13 |
C14 |
180.0 |
180.0 |
| H13 |
C13 |
C14 |
F23 |
0.2 |
360.0 |
| F23 |
C14 |
C13 |
H13 |
0.2 |
360.0 |
| C15 |
C14 |
C13 |
H13 |
180.0 |
180.0 |
| C13 |
C14 |
C15 |
F23 |
180.2 |
180.0 |
| F24 |
C15 |
C14 |
F23 |
359.8 |
0.0 |
| C16 |
C15 |
C14 |
F23 |
179.6 |
180.0 |
| C17 |
C12 |
C11 |
H111 |
284.7 |
149.7 |
| C17 |
C12 |
C11 |
H211 |
164.7 |
29.7 |
| C17 |
C12 |
C13 |
H13 |
180.2 |
180.3 |
| C17 |
C16 |
C15 |
F24 |
180.1 |
179.7 |
| O18 |
C10 |
N02 |
H102 |
0.0 |
180.1 |
| O18 |
C10 |
N02 |
H202 |
180.0 |
0.0 |
| C09 |
N03 |
O19 |
O20 |
182.4 |
180.1 |
| F22 |
C16 |
C15 |
F24 |
0.3 |
360.0 |