PDB Chemical Component X8D

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for X8D

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C13	C14	1.371	1.386
C13	C12	1.381	1.377
C14	C15	1.380	1.380
C12	C11	1.384	1.398
C15	C10	1.379	1.389
C11	C10	1.376	1.402
C11	C2	1.469	1.468
C10	N9	1.411	1.391
C3	C2	1.338	1.349
C3	C4	1.483	1.466
C2	C1	1.481	1.506
C4	N5	1.303	1.312
C4	N9	1.285	1.382
C7	N6	1.355	1.348
C7	N9	1.535	1.349
C7	O8	1.224	1.218
N5	N6	1.371	1.400
C13	H13	1.080	1.080
C14	H14	1.080	1.079
C12	H12	1.080	1.080
C15	H15	1.080	1.080
C3	H3	1.080	1.080
C1	H11C	1.100	1.090
C1	H12C	1.100	1.090
C1	H13C	1.101	1.090
N6	H6	1.000	0.971

Bond Angles for X8D

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C14	C13	C12	119.9	120.4
C13	C14	C15	119.8	120.5
C14	C13	H13	120.0	119.8
C13	C14	H14	120.1	119.7
C13	C12	C11	120.9	119.7
C12	C13	H13	120.0	119.8
C13	C12	H12	119.5	120.1
C14	C15	C10	119.9	120.0
C15	C14	H14	120.1	119.8
C14	C15	H15	120.1	120.0
C12	C11	C10	118.3	119.8
C12	C11	C2	121.6	120.4
C11	C12	H12	119.5	120.2
C15	C10	C11	121.1	119.6
C15	C10	N9	121.1	120.2
C10	C15	H15	120.1	120.0
C10	C11	C2	120.0	119.8
C11	C10	N9	117.8	120.3
C11	C2	C3	120.5	119.3
C11	C2	C1	118.7	120.3
C10	N9	C4	122.8	120.4
C10	N9	C7	131.9	131.3
C2	C3	C4	116.8	119.8
C3	C2	C1	120.8	120.3
C2	C3	H3	121.6	120.1
C3	C4	N5	124.5	131.3
C3	C4	N9	122.0	120.3
C4	C3	H3	121.6	120.1
C2	C1	H11C	109.5	109.5
C2	C1	H12C	109.4	109.5
C2	C1	H13C	109.4	109.5
N5	C4	N9	113.5	108.4
C4	N5	N6	108.9	108.0
C4	N9	C7	105.2	108.2
N6	C7	N9	102.9	107.8
N6	C7	O8	132.9	126.1
C7	N6	N5	109.5	107.6
C7	N6	H6	125.3	126.2
N9	C7	O8	124.2	126.1
N5	N6	H6	125.2	126.2
H11C	C1	H12C	109.5	109.4
H11C	C1	H13C	109.5	109.5
H12C	C1	H13C	109.5	109.5

Torsion Angles for X8D

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C14	C13	C12	C11	359.9	359.9
C12	C13	C14	H13	180.0	180.4
C14	C13	C12	H12	179.9	180.0
C13	C14	C15	C10	0.4	360.0
C15	C14	C13	H14	180.0	180.0
C13	C14	C15	H15	180.4	180.0
C12	C13	C14	C15	360.0	0.1
C14	C13	C12	H13	180.0	179.6
C12	C13	C14	H14	180.0	180.0
C13	C12	C11	C10	359.8	0.0
C13	C12	C11	C2	180.1	180.0
C11	C12	C13	H12	180.0	180.0
C15	C14	C13	C12	360.0	0.1
C15	C14	C13	H13	180.0	179.7
C13	C14	C15	H14	180.0	180.0
C14	C15	C10	C11	359.3	-0.0
C14	C15	C10	N9	180.4	180.0
C10	C15	C14	H15	180.0	180.0
C11	C12	C13	H13	179.9	180.3
C13	C12	C11	H12	180.0	180.0
C15	C10	C11	C12	0.6	-0.0
C10	C11	C12	C2	179.7	180.0
C12	C11	C10	N9	179.5	180.0
C12	C11	C2	C3	178.8	180.0
C12	C11	C2	C1	0.1	-0.0
C10	C15	C14	H14	180.4	180.0
C14	C15	C10	H15	180.0	180.0
C12	C11	C10	C15	0.6	-0.0
C15	C10	C11	C2	180.3	180.0
C11	C10	C15	N9	178.9	180.0
C15	C10	N9	C4	179.7	180.0
C15	C10	N9	C7	2.1	-0.0
C12	C11	C10	C2	180.3	180.0
C10	C11	C12	H12	179.8	180.0
C15	C10	C11	N9	181.1	180.0
C11	C10	C15	H15	179.3	180.0
C10	C11	C2	C3	359.2	-0.0
C10	C11	C2	C1	180.4	180.0
C11	C10	N9	C4	0.8	-0.0
C11	C10	N9	C7	183.1	180.0
C12	C11	C2	C10	179.6	180.0
C2	C11	C12	H12	0.1	-0.0
C2	C11	C10	N9	359.2	-0.0
C11	C2	C3	C4	2.3	360.0
C3	C2	C11	C1	178.7	180.0
C11	C2	C3	H3	182.3	180.0
C11	C2	C1	H11C	123.0	90.0
C11	C2	C1	H12C	243.0	209.9
C11	C2	C1	H13C	3.0	330.0
C15	C10	N9	C11	178.9	180.0
N9	C10	C15	H15	0.4	360.0
N9	C10	C11	C2	359.2	-0.0
C3	C4	N9	C10	0.8	-0.0
N5	C4	N9	C10	181.9	180.0
C4	N9	C10	C7	177.6	180.0
N6	C7	N9	C10	177.7	180.0
C10	N9	C7	O8	357.4	-0.0
C11	C2	C3	C1	181.3	180.0
C2	C3	C4	N5	176.4	180.0
C2	C3	C4	N9	357.6	-0.0
C4	C3	C2	H3	180.0	180.0
C3	C2	C1	H11C	304.2	270.0
C3	C2	C1	H12C	64.2	29.9
C3	C2	C1	H13C	184.2	150.0
C10	N9	C4	C3	0.8	-0.0
C4	C3	C2	C1	181.0	180.0
C2	C3	C4	H3	180.0	180.0
N5	C4	C3	N9	178.8	180.0
C3	C4	N5	N6	181.2	180.0
C3	C4	N9	C7	179.0	180.0
C11	C2	C1	C3	178.7	180.0
C1	C2	C3	C4	181.0	180.0
C1	C2	C3	H3	1.0	-0.0
H11C	C1	C2	H12C	240.0	240.1
H11C	C1	C2	H13C	120.0	120.0
H12C	C1	C2	H13C	240.0	240.0
C10	N9	C4	N5	181.9	180.0
C3	C4	N5	N9	181.1	180.0
N5	C4	C3	H3	356.4	360.0
N5	C4	N9	C7	0.0	-0.0
C7	N6	N5	C4	359.7	-0.0
C4	N5	N6	H6	179.7	180.0
C10	N9	C4	C7	181.8	180.0
C3	C4	N9	N5	179.0	180.0
N9	C4	C3	H3	177.6	180.0
N9	C4	N5	N6	0.2	-0.0
N6	C7	N9	C4	359.8	-0.0
C4	N9	C7	O8	179.4	180.0
C10	N9	C7	N6	177.7	180.0
C4	N5	N6	C7	359.7	-0.0
C4	N9	C7	N6	359.8	-0.0
N9	C7	N6	O8	179.6	180.0
N5	N6	C7	H6	180.0	180.0
C10	N9	C7	C4	177.9	180.0
N6	C7	N9	O8	180.4	180.0
N9	C7	N6	N5	0.3	360.0
N9	C7	N6	H6	180.3	180.0
N6	C7	O8	N9	179.5	180.0
O8	C7	N6	N5	180.7	180.0
O8	C7	N6	H6	0.7	-0.0
N6	N5	C4	N9	0.2	-0.0
N5	N6	C7	N9	0.3	360.0
N5	N6	C7	O8	180.7	180.0
C7	N6	N5	H6	180.0	180.0
C14	C13	H13	C12	180.0	180.4
H13	C13	C14	C15	180.0	179.7
H13	C13	C14	H14	0.0	359.6
H13	C13	C12	C11	179.9	180.3
H13	C13	C12	H12	359.9	0.4
H14	C14	C13	C12	180.0	180.0
C13	C14	H14	C15	180.0	180.0
H14	C14	C13	H13	0.0	359.6
H14	C14	C15	C10	180.4	180.0
H14	C14	C15	H15	0.4	360.0
C13	C12	H12	C11	180.0	180.0
H12	C12	C13	H13	359.9	0.4
H12	C12	C11	C10	179.8	180.0
H12	C12	C11	C2	0.1	-0.0
C14	C15	H15	C10	180.0	180.0
H15	C15	C14	H14	0.4	360.0
H15	C15	C10	C11	179.3	180.0
H15	C15	C10	N9	0.4	360.0
C2	C3	H3	C4	180.0	180.0
H3	C3	C2	C1	1.0	-0.0
H3	C3	C4	N5	356.4	360.0
H3	C3	C4	N9	177.6	180.0
C2	C1	H11C	H12C	120.0	120.0
C2	C1	H11C	H13C	240.0	240.0
H12C	C1	H11C	H13C	120.0	120.0
C2	C1	H12C	H11C	240.0	240.0
C2	C1	H12C	H13C	120.0	120.0
H11C	C1	H12C	H13C	240.0	240.0
C2	C1	H13C	H11C	120.0	120.0
C2	C1	H13C	H12C	240.0	240.0
H11C	C1	H13C	H12C	120.0	119.9
H6	N6	C7	N9	180.3	180.0
H6	N6	C7	O8	0.7	-0.0
C7	N6	H6	N5	180.0	180.0