PDB Chemical Component X88

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for X88

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.418	1.379
C1	C6	1.459	1.390
C1	H1	1.080	1.080
C2	C3	1.434	1.387
C2	H2	1.080	1.080
C3	C4	1.445	1.377
C3	N11	1.355	1.481
C4	C5	1.456	1.397
C4	H4	1.080	1.080
C5	C6	1.482	1.403
C5	C8	1.402	1.475
C6	N7	1.340	1.389
N7	C14	1.481	1.465
N7	HN7	1.000	0.970
C8	N9	1.370	1.347
C8	O10	1.347	1.216
N9	HN9	1.000	0.971
N9	HN9A	1.000	0.971
N11	O12	1.349	1.218
N11	O13	1.219	1.217
C14	C18	1.526	1.507
C14	H14	1.100	1.090
C14	H14A	1.100	1.091
C15	N16	1.380	1.322
C15	C20	1.411	1.383
C15	H15	1.080	1.080
N16	C17	1.379	1.321
C17	C18	1.427	1.383
C17	H17	1.080	1.080
C18	N19	1.393	1.322
N19	C20	1.383	1.321
C20	H20	1.080	1.080

Bond Angles for X88

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C6	122.3	120.1
C2	C1	H1	118.9	120.0
C1	C2	C3	121.6	120.4
C1	C2	H2	119.2	119.8
C6	C1	H1	118.9	120.0
C1	C6	C5	117.5	119.6
C1	C6	N7	121.9	120.1
C3	C2	H2	119.2	119.8
C2	C3	C4	117.4	120.4
C2	C3	N11	121.4	119.8
C4	C3	N11	121.2	119.8
C3	C4	C5	123.2	119.9
C3	C4	H4	118.4	120.1
C3	N11	O12	121.8	120.0
C3	N11	O13	121.6	120.0
C5	C4	H4	118.4	120.1
C4	C5	C6	118.1	119.6
C4	C5	C8	118.4	120.2
C6	C5	C8	123.4	120.2
C5	C6	N7	120.6	120.2
C5	C8	N9	122.9	120.0
C5	C8	O10	120.6	120.0
C6	N7	C14	127.4	120.0
C6	N7	HN7	103.9	119.9
C14	N7	HN7	103.9	120.0
N7	C14	C18	114.0	109.5
N7	C14	H14	108.0	109.4
N7	C14	H14A	108.0	109.5
N9	C8	O10	116.4	120.0
C8	N9	HN9	120.0	120.0
C8	N9	HN9A	120.0	120.0
HN9	N9	HN9A	120.0	119.9
O12	N11	O13	116.6	120.0
C18	C14	H14	108.0	109.5
C18	C14	H14A	108.0	109.5
C14	C18	C17	122.6	120.0
C14	C18	N19	119.5	120.0
H14	C14	H14A	110.9	109.4
N16	C15	C20	119.0	120.0
N16	C15	H15	120.5	120.0
C15	N16	C17	122.7	120.0
C20	C15	H15	120.5	120.0
C15	C20	N19	118.8	120.0
C15	C20	H20	120.6	120.0
N16	C17	C18	118.9	120.0
N16	C17	H17	120.5	120.0
C18	C17	H17	120.6	120.0
C17	C18	N19	117.9	120.0
C18	N19	C20	122.7	120.0
N19	C20	H20	120.6	120.0

Torsion Angles for X88

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C6	C1	C2	H1	180.0	180.3
C2	C1	C6	C5	359.7	360.0
C2	C1	C6	N7	179.0	180.0
C3	C2	C1	H2	180.0	180.0
C1	C2	C3	C4	0.2	0.1
C1	C2	C3	N11	180.3	180.0
C2	C1	C6	H1	180.0	179.7
C6	C1	C2	C3	0.0	360.0
C6	C1	C2	H2	180.0	180.0
C4	C5	C6	C1	0.4	360.0
C1	C6	C5	C8	178.4	180.1
C5	C6	C1	N7	180.7	180.0
C1	C6	N7	C14	359.9	5.6
C1	C6	N7	HN7	119.9	185.5
C2	C1	H1	C6	180.0	180.3
H1	C1	C2	C3	180.0	179.7
H1	C1	C2	H2	0.0	359.7
H1	C1	C6	C5	179.7	180.3
H1	C1	C6	N7	359.0	0.3
C3	C2	C1	C6	0.0	360.0
C3	C2	C1	H1	180.0	179.7
C1	C2	C3	H2	180.0	180.0
C4	C3	C2	N11	179.9	180.1
C2	C3	C4	C5	359.8	359.9
C2	C3	C4	H4	179.9	179.9
C2	C3	N11	O12	179.8	0.1
C2	C3	N11	O13	359.8	180.0
H2	C2	C1	C6	180.0	180.0
H2	C2	C1	H1	0.0	359.7
C1	C2	H2	C3	180.0	180.0
H2	C2	C3	C4	180.2	180.1
H2	C2	C3	N11	0.3	360.0
C4	C3	C2	H2	180.2	180.1
C2	C3	C4	N11	180.1	179.9
C4	C3	N11	O12	359.9	180.0
C4	C3	N11	O13	180.0	359.9
C5	C4	C3	H4	180.0	180.0
C3	C4	C5	C6	359.9	0.1
C3	C4	C5	C8	181.7	180.0
N11	C3	C2	H2	0.3	360.0
C2	C3	N11	C4	179.9	180.1
N11	C3	C4	C5	179.7	180.0
N11	C3	C4	H4	359.7	360.0
O12	N11	C3	O13	179.9	180.1
C1	C6	C5	C4	0.4	360.0
C5	C4	C3	N11	179.7	180.0
C3	C4	C5	H4	180.0	180.0
C6	C5	C4	C8	178.2	180.1
C4	C5	C6	N7	181.0	180.0
C4	C5	C8	N9	26.4	354.1
C4	C5	C8	O10	205.4	174.1
H4	C4	C3	N11	359.7	360.0
C3	C4	H4	C5	180.0	180.0
H4	C4	C5	C6	179.9	180.1
H4	C4	C5	C8	1.7	0.0
C5	C6	C1	H1	179.7	180.3
C1	C6	C5	N7	179.4	180.0
C6	C5	C4	H4	179.9	180.1
C4	C5	C6	C8	181.9	179.9
C6	C5	C8	N9	208.4	174.1
C6	C5	C8	O10	27.3	354.1
C5	C6	N7	C14	179.2	185.6
C5	C6	N7	HN7	299.2	5.6
C8	C5	C4	H4	1.7	0.0
C4	C5	C8	C6	178.1	180.1
C8	C5	C6	N7	359.1	0.1
N9	C8	C5	O10	181.1	180.0
C5	C8	N9	HN9	179.0	360.0
C5	C8	N9	HN9A	359.0	180.0
N7	C6	C1	H1	359.0	0.3
C1	C6	N7	C5	180.7	180.0
N7	C6	C5	C8	359.1	0.1
C14	N7	C6	HN7	240.0	180.0
C6	N7	C14	C18	86.3	180.0
C6	N7	C14	H14	206.2	300.0
C6	N7	C14	H14A	326.3	60.0
C6	N7	C14	HN7	120.0	180.0
C18	C14	N7	H14	240.0	240.0
C18	C14	N7	H14A	120.0	120.0
N7	C14	C18	C17	19.3	95.0
N7	C14	C18	N19	199.3	275.0
H14	C14	N7	H14A	240.0	240.0
C6	N7	HN7	C14	225.1	180.0
HN7	N7	C14	C18	326.3	0.0
HN7	N7	C14	H14	86.2	120.0
HN7	N7	C14	H14A	206.3	240.0
C5	C8	N9	O10	179.0	180.0
HN9	N9	C8	HN9A	180.0	180.0
C5	C8	O10	N9	181.0	180.0
O10	C8	N9	HN9	0.0	180.0
O10	C8	N9	HN9A	180.0	360.0
HN9	N9	C8	O10	0.0	180.0
C8	N9	HN9	HN9A	180.0	180.0
HN9A	N9	C8	O10	180.0	360.0
C8	N9	HN9A	HN9	180.0	180.0
C3	N11	O12	O13	180.1	179.9
C3	N11	O13	O12	179.9	180.1
C18	C14	N7	HN7	326.3	0.0
N7	C14	C18	H14	120.0	120.0
N7	C14	C18	H14A	240.0	240.0
H14	C14	C18	H14A	120.0	120.0
N16	C17	C18	C14	180.1	180.0
C14	C18	C17	H17	0.1	0.0
C17	C18	C14	N19	180.0	180.0
C14	C18	N19	C20	180.0	180.0
H14	C14	N7	HN7	86.2	120.0
N7	C14	H14	C18	236.3	240.0
N7	C14	H14	H14A	118.2	120.0
C18	C14	H14	H14A	241.9	240.0
H14	C14	C18	C17	259.3	335.0
H14	C14	C18	N19	79.3	155.0
H14A	C14	N7	HN7	206.3	240.0
N7	C14	H14A	C18	123.7	120.1
N7	C14	H14A	H14	241.8	240.0
C18	C14	H14A	H14	118.1	120.0
H14A	C14	C18	C17	139.3	215.0
H14A	C14	C18	N19	319.3	35.0
C20	C15	N16	H15	180.0	180.2
N16	C15	C20	N19	360.0	360.0
N16	C15	C20	H20	180.0	180.0
C15	N16	C17	C18	359.9	360.0
C15	N16	C17	H17	179.9	180.0
N16	C15	C20	H15	180.0	179.8
C20	C15	N16	C17	0.1	0.0
C18	N19	C20	C15	0.0	0.0
N19	C20	C15	H20	180.0	180.0
N16	C15	H15	C20	180.0	180.2
H15	C15	N16	C17	180.0	179.8
H15	C15	C20	N19	180.0	180.2
H15	C15	C20	H20	360.0	0.3
C14	C18	C17	N16	180.1	180.0
C17	N16	C15	C20	0.1	0.0
C17	N16	C15	H15	180.0	179.8
C18	C17	N16	H17	180.0	180.0
N16	C17	C18	N19	0.1	0.0
C17	C18	C14	H14	259.3	335.0
C17	C18	C14	H14A	139.3	215.0
C14	C18	C17	N19	180.0	180.0
N16	C17	C18	H17	180.0	180.0
C17	C18	N19	C20	359.9	360.0
N16	C17	H17	C18	180.0	180.0
H17	C17	C18	N19	180.1	180.0
N19	C18	C14	H14	79.3	155.0
N19	C18	C14	H14A	319.3	35.0
C14	C18	N19	C17	180.0	180.0
C15	C20	N19	C18	0.0	0.0
N19	C18	C17	H17	180.1	180.0
C18	N19	C20	H20	180.1	180.0
N19	C20	C15	H15	180.0	180.2
C15	C20	N19	H20	180.0	180.0
H20	C20	C15	H15	360.0	0.3
C15	C20	H20	N19	180.0	180.0