PDB Chemical Component X76
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for X76
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N02 |
C10 |
1.378 |
1.348 |
| O17 |
C10 |
1.213 |
1.216 |
| C10 |
C05 |
1.393 |
1.474 |
| C05 |
C04 |
1.434 |
1.397 |
| C05 |
C06 |
1.448 |
1.404 |
| C04 |
C09 |
1.423 |
1.378 |
| N01 |
C06 |
1.304 |
1.389 |
| N01 |
C11 |
1.495 |
1.465 |
| C06 |
C07 |
1.447 |
1.389 |
| C11 |
C12 |
1.510 |
1.507 |
| C09 |
C08 |
1.419 |
1.386 |
| C13 |
C12 |
1.413 |
1.382 |
| C13 |
N03 |
1.379 |
1.318 |
| C07 |
C08 |
1.419 |
1.381 |
| C12 |
C16 |
1.417 |
1.387 |
| N03 |
C14 |
1.376 |
1.319 |
| C16 |
C15 |
1.419 |
1.387 |
| C14 |
C15 |
1.411 |
1.382 |
| N01 |
HN01 |
1.000 |
0.970 |
| N02 |
H102 |
1.000 |
0.970 |
| N02 |
H202 |
1.000 |
0.971 |
| C04 |
H04 |
1.080 |
1.080 |
| C07 |
H07 |
1.080 |
1.080 |
| C08 |
H08 |
1.080 |
1.079 |
| C09 |
H09 |
1.080 |
1.079 |
| C11 |
H111 |
1.100 |
1.090 |
| C11 |
H211 |
1.100 |
1.090 |
| C13 |
H13 |
1.080 |
1.080 |
| C14 |
H14 |
1.080 |
1.080 |
| C15 |
H15 |
1.080 |
1.080 |
| C16 |
H16 |
1.080 |
1.079 |
Bond Angles for X76
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N02 |
C10 |
C05 |
119.7 |
120.0 |
| C10 |
N02 |
H102 |
120.0 |
120.1 |
| C10 |
N02 |
H202 |
120.0 |
120.0 |
| C05 |
C04 |
C09 |
121.1 |
120.0 |
| C05 |
C04 |
H04 |
119.5 |
120.0 |
| N01 |
C06 |
C05 |
119.7 |
120.2 |
| C05 |
C06 |
C07 |
118.9 |
119.7 |
| C04 |
C09 |
C08 |
120.2 |
120.4 |
| C09 |
C04 |
H04 |
119.5 |
120.0 |
| C04 |
C09 |
H09 |
119.9 |
119.9 |
| C06 |
N01 |
C11 |
124.5 |
120.0 |
| N01 |
C06 |
C07 |
121.5 |
120.2 |
| C06 |
N01 |
HN01 |
104.7 |
120.0 |
| N01 |
C11 |
C12 |
111.5 |
109.5 |
| C11 |
N01 |
HN01 |
104.8 |
120.1 |
| N01 |
C11 |
H111 |
108.8 |
109.5 |
| N01 |
C11 |
H211 |
108.8 |
109.5 |
| C06 |
C07 |
C08 |
121.0 |
120.1 |
| C06 |
C07 |
H07 |
119.5 |
120.0 |
| C11 |
C12 |
C16 |
120.3 |
120.4 |
| C12 |
C11 |
H111 |
108.8 |
109.4 |
| C12 |
C11 |
H211 |
108.8 |
109.5 |
| C09 |
C08 |
H08 |
120.0 |
119.9 |
| C13 |
C12 |
C16 |
117.7 |
119.2 |
| C13 |
N03 |
C14 |
117.7 |
121.8 |
| C08 |
C07 |
H07 |
119.5 |
119.9 |
| C07 |
C08 |
H08 |
120.1 |
119.7 |
| C12 |
C16 |
C15 |
120.4 |
118.4 |
| C12 |
C16 |
H16 |
119.8 |
120.8 |
| N03 |
C14 |
C15 |
123.2 |
120.7 |
| N03 |
C14 |
H14 |
118.4 |
119.7 |
| C16 |
C15 |
H15 |
121.1 |
120.4 |
| C15 |
C14 |
H14 |
118.4 |
119.6 |
| C14 |
C15 |
H15 |
121.1 |
120.4 |
| H102 |
N02 |
H202 |
120.0 |
120.0 |
| H111 |
C11 |
H211 |
110.1 |
109.5 |
Torsion Angles for X76
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H102 |
N02 |
C10 |
H202 |
180.0 |
180.1 |
| O17 |
C10 |
N02 |
H102 |
0.0 |
180.0 |
| O17 |
C10 |
N02 |
H202 |
180.0 |
359.9 |
| C05 |
C10 |
N02 |
H102 |
179.3 |
0.1 |
| C05 |
C10 |
N02 |
H202 |
359.3 |
180.0 |
| C10 |
C05 |
C04 |
H04 |
0.4 |
359.7 |
| N02 |
C10 |
C05 |
C04 |
32.2 |
5.9 |
| N01 |
C06 |
C05 |
C04 |
180.0 |
180.0 |
| C05 |
C04 |
C09 |
C08 |
0.1 |
0.1 |
| C09 |
C04 |
C05 |
H04 |
180.0 |
180.2 |
| C05 |
C04 |
C09 |
H09 |
180.1 |
179.7 |
| N02 |
C10 |
C05 |
C06 |
212.5 |
185.8 |
| C06 |
C05 |
C04 |
C09 |
0.1 |
360.0 |
| C06 |
C05 |
C04 |
H04 |
180.0 |
179.8 |
| C05 |
C06 |
N01 |
C11 |
170.2 |
174.4 |
| N01 |
C06 |
C05 |
C07 |
180.1 |
180.1 |
| C05 |
C06 |
N01 |
HN01 |
290.2 |
354.0 |
| C05 |
C06 |
C07 |
C08 |
0.2 |
360.0 |
| C05 |
C06 |
C07 |
H07 |
180.2 |
180.1 |
| C05 |
C04 |
C09 |
H04 |
180.0 |
179.8 |
| C04 |
C09 |
C08 |
H08 |
179.9 |
180.0 |
| C05 |
C06 |
N01 |
C07 |
179.9 |
179.9 |
| C06 |
N01 |
C11 |
C12 |
85.9 |
180.0 |
| C11 |
N01 |
C06 |
HN01 |
240.0 |
180.4 |
| C06 |
N01 |
C11 |
H111 |
205.9 |
299.9 |
| C06 |
N01 |
C11 |
H211 |
325.9 |
60.0 |
| N01 |
C06 |
C07 |
C08 |
180.0 |
179.9 |
| N01 |
C06 |
C07 |
H07 |
0.0 |
0.0 |
| C11 |
N01 |
C06 |
C05 |
170.2 |
174.4 |
| C11 |
N01 |
C06 |
C07 |
350.4 |
354.4 |
| C06 |
N01 |
C11 |
HN01 |
120.0 |
179.6 |
| N01 |
C11 |
C12 |
C16 |
229.4 |
90.0 |
| C12 |
C11 |
N01 |
H111 |
240.0 |
240.0 |
| C12 |
C11 |
N01 |
H211 |
120.0 |
120.0 |
| H111 |
C11 |
N01 |
H211 |
240.0 |
240.0 |
| N01 |
C06 |
C07 |
C05 |
179.9 |
179.9 |
| C07 |
C06 |
N01 |
C11 |
350.4 |
354.4 |
| C07 |
C06 |
N01 |
HN01 |
110.4 |
174.1 |
| C08 |
C07 |
C06 |
H07 |
180.0 |
179.9 |
| C06 |
C07 |
C08 |
H08 |
179.9 |
180.0 |
| C12 |
C11 |
N01 |
HN01 |
325.9 |
0.3 |
| N01 |
C11 |
C12 |
H111 |
120.0 |
120.0 |
| N01 |
C11 |
C12 |
H211 |
240.0 |
239.9 |
| C13 |
C12 |
C11 |
C16 |
179.8 |
180.0 |
| C11 |
C12 |
C16 |
C15 |
179.9 |
180.1 |
| C11 |
C12 |
C16 |
H16 |
359.9 |
360.0 |
| H111 |
C11 |
C12 |
H211 |
120.0 |
120.0 |
| C08 |
C09 |
C04 |
H04 |
180.1 |
180.3 |
| C04 |
C09 |
C08 |
H09 |
180.0 |
179.6 |
| C09 |
C08 |
C07 |
H07 |
179.9 |
180.0 |
| C07 |
C08 |
C09 |
H08 |
180.0 |
179.9 |
| C11 |
C12 |
C13 |
C16 |
180.2 |
180.0 |
| C13 |
C12 |
C11 |
H111 |
289.2 |
150.0 |
| C13 |
C12 |
C11 |
H211 |
169.2 |
30.1 |
| C12 |
C13 |
N03 |
C14 |
359.9 |
360.0 |
| C13 |
C12 |
C16 |
C15 |
0.0 |
0.0 |
| C13 |
C12 |
C16 |
H16 |
180.0 |
179.9 |
| C13 |
N03 |
C14 |
C15 |
0.1 |
360.0 |
| C13 |
N03 |
C14 |
H14 |
180.1 |
180.0 |
| C04 |
C09 |
C08 |
C07 |
359.9 |
359.9 |
| C06 |
C07 |
C08 |
H07 |
180.0 |
180.1 |
| C09 |
C08 |
C07 |
H08 |
180.0 |
180.1 |
| C16 |
C12 |
C11 |
H111 |
109.4 |
330.0 |
| C16 |
C12 |
C11 |
H211 |
349.4 |
210.0 |
| C12 |
C16 |
C15 |
H15 |
179.9 |
180.1 |
| C15 |
C14 |
N03 |
H14 |
180.0 |
180.0 |
| N03 |
C14 |
C15 |
H15 |
180.0 |
179.9 |
| C12 |
C16 |
C15 |
H16 |
180.0 |
179.9 |
| C16 |
C15 |
C14 |
H14 |
179.9 |
180.0 |
| C14 |
C15 |
C16 |
H15 |
180.0 |
179.9 |
| C12 |
C16 |
C15 |
C14 |
360.0 |
359.9 |
| N03 |
C14 |
C15 |
H14 |
180.0 |
180.0 |
| C16 |
C15 |
C14 |
H15 |
180.0 |
180.1 |
| HN01 |
N01 |
C06 |
C05 |
290.2 |
354.0 |
| C06 |
N01 |
HN01 |
C11 |
227.6 |
180.4 |
| HN01 |
N01 |
C06 |
C07 |
110.4 |
174.1 |
| HN01 |
N01 |
C11 |
C12 |
325.9 |
0.3 |
| HN01 |
N01 |
C11 |
H111 |
85.9 |
120.3 |
| HN01 |
N01 |
C11 |
H211 |
205.9 |
240.3 |
| H102 |
N02 |
C10 |
C05 |
179.3 |
0.1 |
| C10 |
N02 |
H102 |
H202 |
180.0 |
179.9 |
| H202 |
N02 |
C10 |
C05 |
359.3 |
180.0 |
| C10 |
N02 |
H202 |
H102 |
180.0 |
180.1 |
| C05 |
C04 |
H04 |
C09 |
180.0 |
180.2 |
| H04 |
C04 |
C09 |
C08 |
180.1 |
180.3 |
| H04 |
C04 |
C09 |
H09 |
0.1 |
359.9 |
| C06 |
C07 |
H07 |
C08 |
180.0 |
179.9 |
| H07 |
C07 |
C08 |
H08 |
359.9 |
359.9 |
| H08 |
C08 |
C07 |
H07 |
359.9 |
359.9 |
| C04 |
C09 |
H09 |
C08 |
180.0 |
180.4 |
| H09 |
C09 |
C04 |
H04 |
0.1 |
359.9 |
| H09 |
C09 |
C08 |
H08 |
359.9 |
0.3 |
| N01 |
C11 |
H111 |
C12 |
238.3 |
240.0 |
| H111 |
C11 |
N01 |
HN01 |
85.9 |
120.3 |
| N01 |
C11 |
H111 |
H211 |
119.2 |
120.1 |
| H111 |
C11 |
C12 |
C16 |
109.4 |
330.0 |
| C12 |
C11 |
H111 |
H211 |
240.8 |
240.0 |
| N01 |
C11 |
H211 |
C12 |
121.6 |
120.0 |
| H211 |
C11 |
N01 |
HN01 |
205.9 |
240.3 |
| N01 |
C11 |
H211 |
H111 |
240.8 |
240.0 |
| H211 |
C11 |
C12 |
C16 |
349.4 |
210.0 |
| C12 |
C11 |
H211 |
H111 |
119.2 |
120.0 |
| H13 |
C13 |
C12 |
C16 |
180.1 |
180.0 |
| H13 |
C13 |
N03 |
C14 |
179.8 |
180.0 |
| N03 |
C14 |
H14 |
C15 |
180.0 |
180.0 |
| H14 |
C14 |
C15 |
H15 |
360.0 |
359.9 |
| H15 |
C15 |
C14 |
H14 |
360.0 |
359.9 |
| C12 |
C16 |
H16 |
C15 |
180.0 |
180.1 |
| H16 |
C16 |
C15 |
H15 |
359.9 |
0.1 |