PDB Chemical Component X72
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for X72
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N01 |
C08 |
1.309 |
1.389 |
| N01 |
C13 |
1.484 |
1.465 |
| N01 |
HN01 |
1.000 |
0.970 |
| N02 |
C12 |
1.354 |
1.348 |
| N02 |
H102 |
1.000 |
0.971 |
| N02 |
H202 |
1.000 |
0.970 |
| N04 |
C16 |
1.359 |
1.318 |
| N05 |
O19 |
1.309 |
1.218 |
| C06 |
C11 |
1.426 |
1.377 |
| C06 |
H06 |
1.080 |
1.080 |
| C07 |
C06 |
1.438 |
1.398 |
| C07 |
C08 |
1.434 |
1.404 |
| C08 |
C09 |
1.429 |
1.389 |
| C09 |
C10 |
1.414 |
1.381 |
| C09 |
H09 |
1.080 |
1.081 |
| C10 |
CL21 |
1.715 |
1.736 |
| C11 |
N05 |
1.303 |
1.480 |
| C11 |
C10 |
1.447 |
1.386 |
| C12 |
C07 |
1.376 |
1.473 |
| C13 |
C14 |
1.508 |
1.507 |
| C13 |
H113 |
1.100 |
1.090 |
| C13 |
H213 |
1.101 |
1.090 |
| C14 |
C15 |
1.395 |
1.386 |
| C15 |
N03 |
1.369 |
1.324 |
| C15 |
H15 |
1.080 |
1.080 |
| C16 |
N03 |
1.359 |
1.318 |
| C16 |
H16 |
1.080 |
1.081 |
| C17 |
C14 |
1.401 |
1.387 |
| C17 |
N04 |
1.362 |
1.323 |
| C17 |
H17 |
1.080 |
1.080 |
| O18 |
C12 |
1.223 |
1.216 |
| O20 |
N05 |
1.320 |
1.217 |
Bond Angles for X72
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C08 |
N01 |
C13 |
123.5 |
120.0 |
| C08 |
N01 |
HN01 |
105.0 |
120.0 |
| N01 |
C08 |
C07 |
120.5 |
120.2 |
| N01 |
C08 |
C09 |
120.7 |
120.2 |
| C13 |
N01 |
HN01 |
105.0 |
120.0 |
| N01 |
C13 |
C14 |
109.7 |
109.5 |
| N01 |
C13 |
H113 |
109.4 |
109.5 |
| N01 |
C13 |
H213 |
109.4 |
109.5 |
| C12 |
N02 |
H102 |
120.0 |
120.0 |
| C12 |
N02 |
H202 |
120.0 |
120.0 |
| N02 |
C12 |
C07 |
120.2 |
120.0 |
| H102 |
N02 |
H202 |
120.0 |
120.1 |
| N04 |
C16 |
H16 |
117.5 |
119.1 |
| C11 |
N05 |
O19 |
121.6 |
120.0 |
| C11 |
C06 |
H06 |
119.2 |
120.0 |
| C07 |
C06 |
C11 |
121.6 |
120.0 |
| C06 |
C11 |
C10 |
118.0 |
120.3 |
| C07 |
C06 |
H06 |
119.2 |
120.0 |
| C07 |
C08 |
C09 |
118.9 |
119.6 |
| C08 |
C09 |
C10 |
121.4 |
120.1 |
| C08 |
C09 |
H09 |
119.3 |
119.9 |
| C10 |
C09 |
H09 |
119.3 |
120.0 |
| C09 |
C10 |
CL21 |
116.9 |
119.8 |
| C11 |
C10 |
CL21 |
122.6 |
119.8 |
| C14 |
C13 |
H113 |
109.4 |
109.4 |
| C14 |
C13 |
H213 |
109.4 |
109.5 |
| C13 |
C14 |
C15 |
122.5 |
120.8 |
| H113 |
C13 |
H213 |
109.6 |
109.5 |
| C14 |
C15 |
H15 |
118.1 |
120.4 |
Torsion Angles for X72
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C13 |
N01 |
C08 |
HN01 |
240.0 |
180.3 |
| C08 |
N01 |
C13 |
C14 |
97.9 |
180.0 |
| C08 |
N01 |
C13 |
H113 |
217.9 |
300.0 |
| C08 |
N01 |
C13 |
H213 |
337.9 |
60.0 |
| C07 |
C08 |
N01 |
C09 |
180.4 |
180.0 |
| N01 |
C08 |
C09 |
C10 |
179.9 |
180.0 |
| N01 |
C08 |
C09 |
H09 |
359.9 |
0.0 |
| C08 |
N01 |
C13 |
HN01 |
120.0 |
179.7 |
| C13 |
N01 |
C08 |
C07 |
156.0 |
174.4 |
| C13 |
N01 |
C08 |
C09 |
335.6 |
354.4 |
| C14 |
C13 |
N01 |
H113 |
240.0 |
240.1 |
| C14 |
C13 |
N01 |
H213 |
120.0 |
120.0 |
| N01 |
C13 |
C14 |
C15 |
213.4 |
89.9 |
| H113 |
C13 |
N01 |
H213 |
240.0 |
240.0 |
| C08 |
N01 |
HN01 |
C13 |
228.4 |
180.3 |
| HN01 |
N01 |
C08 |
C07 |
276.0 |
354.1 |
| HN01 |
N01 |
C08 |
C09 |
95.6 |
174.1 |
| HN01 |
N01 |
C13 |
C14 |
337.9 |
0.3 |
| HN01 |
N01 |
C13 |
H113 |
97.9 |
120.3 |
| HN01 |
N01 |
C13 |
H213 |
217.9 |
240.3 |
| H102 |
N02 |
C12 |
H202 |
180.0 |
180.0 |
| C12 |
N02 |
H102 |
H202 |
180.0 |
180.0 |
| H102 |
N02 |
C12 |
C07 |
183.4 |
360.0 |
| C12 |
N02 |
H202 |
H102 |
180.0 |
180.0 |
| H202 |
N02 |
C12 |
C07 |
3.4 |
179.9 |
| C06 |
C11 |
N05 |
O19 |
200.3 |
359.9 |
| C07 |
C06 |
C11 |
H06 |
180.0 |
179.6 |
| C06 |
C11 |
C10 |
CL21 |
181.5 |
180.0 |
| C07 |
C06 |
H06 |
C11 |
180.0 |
180.4 |
| H06 |
C06 |
C11 |
C10 |
179.5 |
180.3 |
| N01 |
C08 |
C07 |
C06 |
180.7 |
179.9 |
| N02 |
C12 |
C07 |
C06 |
29.2 |
6.0 |
| C11 |
C06 |
C07 |
H06 |
180.0 |
180.4 |
| C07 |
C06 |
C11 |
C10 |
359.5 |
359.9 |
| C07 |
C08 |
N01 |
C13 |
156.0 |
174.4 |
| C07 |
C08 |
N01 |
HN01 |
276.0 |
354.1 |
| N01 |
C08 |
C07 |
C09 |
179.6 |
180.0 |
| N02 |
C12 |
C07 |
C08 |
208.8 |
185.9 |
| C08 |
C07 |
C06 |
C11 |
359.4 |
0.1 |
| C08 |
C07 |
C06 |
H06 |
179.4 |
179.7 |
| C07 |
C08 |
C09 |
C10 |
359.5 |
360.0 |
| C07 |
C08 |
C09 |
H09 |
179.5 |
180.0 |
| C09 |
C08 |
N01 |
C13 |
335.6 |
354.4 |
| C09 |
C08 |
N01 |
HN01 |
95.6 |
174.1 |
| N01 |
C08 |
C09 |
C07 |
180.4 |
180.0 |
| C10 |
C09 |
C08 |
H09 |
180.0 |
180.0 |
| C08 |
C09 |
C10 |
CL21 |
179.0 |
180.0 |
| C06 |
C11 |
C10 |
C09 |
1.1 |
0.1 |
| C08 |
C09 |
C10 |
H09 |
180.0 |
180.0 |
| C11 |
C10 |
C09 |
CL21 |
180.4 |
179.9 |
| C08 |
C09 |
H09 |
C10 |
180.0 |
180.0 |
| H09 |
C09 |
C10 |
CL21 |
359.0 |
0.0 |
| CL21 |
C10 |
C09 |
H09 |
359.0 |
0.0 |
| C10 |
C11 |
N05 |
O19 |
20.8 |
179.8 |
| C10 |
C11 |
C06 |
H06 |
179.5 |
180.3 |
| C11 |
C10 |
C09 |
H09 |
179.4 |
180.0 |
| C09 |
C10 |
C11 |
CL21 |
179.6 |
180.1 |
| C07 |
C12 |
N02 |
H102 |
183.4 |
360.0 |
| C07 |
C12 |
N02 |
H202 |
3.4 |
179.9 |
| C12 |
C07 |
C06 |
H06 |
359.0 |
359.6 |
| C14 |
C13 |
N01 |
HN01 |
337.9 |
0.3 |
| N01 |
C13 |
C14 |
H113 |
120.0 |
120.0 |
| N01 |
C13 |
C14 |
H213 |
240.0 |
240.0 |
| H113 |
C13 |
C14 |
H213 |
120.0 |
120.0 |
| C13 |
C14 |
C15 |
H15 |
359.7 |
0.1 |
| H113 |
C13 |
N01 |
HN01 |
97.9 |
120.3 |
| N01 |
C13 |
H113 |
C14 |
239.8 |
240.0 |
| N01 |
C13 |
H113 |
H213 |
119.9 |
120.0 |
| C14 |
C13 |
H113 |
H213 |
240.1 |
240.0 |
| H113 |
C13 |
C14 |
C15 |
93.4 |
330.0 |
| H213 |
C13 |
N01 |
HN01 |
217.9 |
240.3 |
| N01 |
C13 |
H213 |
C14 |
120.2 |
120.0 |
| N01 |
C13 |
H213 |
H113 |
240.1 |
240.0 |
| C14 |
C13 |
H213 |
H113 |
119.9 |
120.0 |
| H213 |
C13 |
C14 |
C15 |
333.4 |
210.0 |
| C15 |
C14 |
C13 |
H113 |
93.4 |
330.0 |
| C15 |
C14 |
C13 |
H213 |
333.4 |
210.0 |
| C17 |
C14 |
C13 |
H113 |
273.2 |
150.0 |
| C17 |
C14 |
C13 |
H213 |
153.2 |
30.0 |
| C17 |
C14 |
C15 |
H15 |
179.9 |
180.1 |
| C17 |
N04 |
C16 |
H16 |
180.1 |
179.9 |
| O18 |
C12 |
N02 |
H102 |
0.0 |
180.0 |
| O18 |
C12 |
N02 |
H202 |
180.0 |
359.9 |