PDB Chemical Component X6X

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for X6X

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O3	C3	1.485	1.429
C3	C4	1.538	1.532
C3	C2	1.562	1.532
C4	O4	1.408	1.429
C4	C5	1.546	1.531
N2	C2	1.478	1.469
O6	C6	1.424	1.429
C5	C6	1.541	1.530
C5	O5	1.449	1.429
C2	C1	1.580	1.531
O1	C1	1.375	1.429
C1	O5	1.416	1.429
O4	HO4	0.950	0.967
C4	H4	1.100	1.090
C3	H3	1.100	1.090
O3	HO3	0.950	0.966
C2	H2	1.101	1.090
N2	HN21	1.000	1.009
N2	HN22	0.999	1.009
C1	H1	1.101	1.090
O1	HO1	0.950	0.967
C5	H5	1.099	1.090
C6	H61	1.100	1.090
C6	H62	1.100	1.090
O6	HO6	0.950	0.967

Bond Angles for X6X

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O3	C3	C2	111.6	109.5
O3	C3	H3	109.4	109.7
C3	C4	C5	111.2	109.2
C3	C4	H4	109.2	109.6
C3	C2	C1	111.0	109.1
C2	C3	H3	108.5	109.5
C3	C2	H2	108.1	109.5
C4	O4	HO4	109.5	114.0
C4	C5	C6	108.2	109.5
C4	C5	O5	112.3	109.4
C5	C4	H4	109.2	109.5
C4	C5	H5	110.7	109.5
N2	C2	C1	109.1	109.5
N2	C2	H2	109.2	109.6
O6	C6	H61	109.6	109.4
O6	C6	H62	109.6	109.5
C6	C5	H5	110.8	109.5
C5	C6	H61	109.6	109.5
C5	C6	H62	109.6	109.5
C2	C1	O5	110.0	109.4
C1	C2	H2	107.9	109.5
C2	C1	H1	108.5	109.5
O1	C1	O5	105.7	109.5
O1	C1	H1	111.5	109.5
O5	C1	H1	110.8	109.4
HN21	N2	HN22	109.4	111.0
H61	C6	H62	109.5	109.5

Torsion Angles for X6X

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O3	C3	C4	C5	174.0	176.8
O3	C3	C4	H4	294.5	296.7
O3	C3	C2	C1	186.8	183.1
C2	C3	O3	H3	239.9	239.8
O3	C3	C2	H2	305.1	303.0
C3	C4	O4	HO4	180.0	179.7
C3	C4	C5	C6	197.2	182.4
C3	C4	C5	O5	309.3	302.4
C5	C4	C3	H4	239.5	240.1
C3	C4	C5	H5	75.6	62.3
O3	C3	C2	H3	120.6	120.3
C2	C3	C4	C5	51.7	57.0
C2	C3	C4	H4	172.2	176.9
N2	C2	C3	C1	238.2	240.1
N2	C2	C3	H2	120.0	120.2
C3	C2	C1	O5	52.8	57.6
C1	C2	C3	H2	241.8	240.1
C3	C2	C1	H1	174.2	177.6
C3	C4	C5	H4	120.6	119.9
C5	C4	O4	HO4	59.6	60.0
C6	C5	C4	H5	121.6	120.1
C4	C5	C6	H61	157.7	304.9
C4	C5	C6	H62	37.5	65.0
C3	C2	N2	C1	122.9	119.6
N2	C2	C3	H3	304.4	303.0
C3	C2	N2	H2	240.6	239.8
N2	C2	C1	O5	175.9	177.5
C1	C2	N2	H2	117.7	120.2
N2	C2	C1	H1	297.3	297.4
O6	C6	C5	H5	39.2	305.1
C5	C6	O6	H61	240.1	120.0
C5	C6	O6	H62	119.9	240.0
H61	C6	O6	H62	239.8	120.0
C4	C5	C6	O5	118.7	119.9
C6	C5	C4	H4	76.6	62.5
C4	C5	C6	H5	238.4	239.9
O6	C6	C5	H61	119.9	240.1
O6	C6	C5	H62	240.1	120.0
H61	C6	C5	H62	120.2	239.9
C4	C5	O5	C6	244.2	240.0
O5	C5	C4	H4	188.8	182.5
C4	C5	O5	H5	125.4	120.0
C5	O5	C1	H1	185.3	178.9
C1	C2	C3	H3	66.2	62.8
C3	C2	C1	H2	118.4	119.9
N2	C2	C1	H2	241.5	239.8
O1	C1	C2	O5	243.8	240.0
O1	C1	C2	H1	122.4	120.0
O5	C1	C2	H1	238.6	240.1
C2	C1	O1	O5	118.9	120.0
O1	C1	C2	H2	178.2	177.7
C2	C1	O1	H1	239.3	240.0
O5	C1	O1	H1	120.4	120.0
C4	C5	O5	C1	54.4	61.1
O5	C1	C2	H2	294.4	297.7
C2	C1	O5	H1	120.0	120.0
O1	C1	O5	H1	239.1	240.0
C3	C4	H4	C5	238.2	240.3
H4	C4	O4	HO4	299.5	299.9
H4	C4	C5	C6	76.6	62.5
H4	C4	C5	O5	188.8	182.5
H4	C4	C5	H5	315.0	302.4
O3	C3	H3	C2	238.0	239.8
H3	C3	C4	C5	292.7	297.2
H3	C3	C4	H4	53.3	57.0
H3	C3	C2	C1	66.2	62.8
H3	C3	C2	H2	184.4	182.8
HO3	O3	C3	C2	301.6	299.5
HO3	O3	C3	H3	61.7	59.7
C3	C2	H2	C1	239.8	240.3
H2	C2	C3	H3	184.4	182.8
N2	C2	H2	C1	118.4	120.2
H2	C2	C1	O5	294.4	297.7
H2	C2	C1	H1	55.8	57.7
HN21	N2	C2	C1	57.1	60.4
HN21	N2	C2	H2	299.4	300.2
HN22	N2	C2	C1	177.1	184.3
HN22	N2	C2	H2	59.4	64.1
C2	C1	H1	O5	239.1	240.1
H1	C1	C2	H2	55.8	57.7
O1	C1	H1	O5	117.4	120.0
HO1	O1	C1	O5	61.1	60.0
HO1	O1	C1	H1	300.7	300.0
C4	C5	H5	C6	120.1	120.1
C4	C5	H5	O5	233.7	240.1
H5	C5	C4	H4	315.0	302.4
H5	C5	C6	H61	279.3	65.0
H5	C5	C6	H62	159.1	185.1
O6	C6	H61	H62	120.3	240.0
H61	C6	C5	H5	279.3	65.0
C5	C6	H61	H62	239.7	120.0
O6	C6	H62	H61	239.7	120.0
H62	C6	C5	H5	159.1	185.1
C5	C6	H62	H61	120.3	240.0
HO6	O6	C6	H61	299.9	60.1
HO6	O6	C6	H62	60.1	300.0