PDB Chemical Component X64
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for X64
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N01 |
C07 |
1.383 |
1.313 |
| N02 |
C08 |
1.310 |
1.377 |
| N02 |
HN02 |
0.999 |
0.970 |
| N03 |
H103 |
1.000 |
0.971 |
| N03 |
H203 |
1.000 |
0.970 |
| N04 |
S28 |
1.685 |
1.655 |
| N04 |
H104 |
1.000 |
0.970 |
| N04 |
H204 |
1.000 |
0.970 |
| N05 |
O25 |
1.311 |
1.218 |
| N05 |
O26 |
1.310 |
1.218 |
| C06 |
C10 |
1.394 |
1.407 |
| C06 |
C07 |
1.389 |
1.383 |
| C07 |
N03 |
1.284 |
1.386 |
| C08 |
N01 |
1.317 |
1.303 |
| C09 |
N02 |
1.316 |
1.398 |
| C10 |
O22 |
1.238 |
1.219 |
| C11 |
C10 |
1.406 |
1.480 |
| C12 |
N05 |
1.293 |
1.480 |
| C12 |
C11 |
1.459 |
1.396 |
| C13 |
C12 |
1.435 |
1.380 |
| C13 |
H13 |
1.080 |
1.081 |
| C14 |
C13 |
1.416 |
1.383 |
| C14 |
C15 |
1.429 |
1.384 |
| C14 |
H14 |
1.080 |
1.080 |
| C15 |
C16 |
1.418 |
1.380 |
| C15 |
H15 |
1.080 |
1.079 |
| C16 |
C11 |
1.441 |
1.395 |
| C16 |
H16 |
1.080 |
1.081 |
| C17 |
C09 |
1.438 |
1.388 |
| C17 |
H17 |
1.080 |
1.081 |
| C18 |
C17 |
1.415 |
1.381 |
| C18 |
H18 |
1.080 |
1.080 |
| C19 |
C18 |
1.409 |
1.383 |
| C19 |
C20 |
1.429 |
1.384 |
| C20 |
C21 |
1.415 |
1.381 |
| C20 |
H20 |
1.080 |
1.079 |
| C21 |
C09 |
1.427 |
1.389 |
| C21 |
H21 |
1.080 |
1.080 |
| O24 |
S28 |
1.461 |
1.420 |
| S27 |
C08 |
1.726 |
1.709 |
| S27 |
C06 |
1.735 |
1.762 |
| S28 |
O23 |
1.441 |
1.421 |
| S28 |
C19 |
1.781 |
1.762 |
Bond Angles for X64
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N01 |
C07 |
C06 |
115.9 |
113.6 |
| N01 |
C07 |
N03 |
121.4 |
123.2 |
| C08 |
N02 |
HN02 |
115.2 |
120.0 |
| C09 |
N02 |
HN02 |
115.2 |
120.0 |
| H103 |
N03 |
H203 |
109.5 |
120.0 |
| C07 |
N03 |
H103 |
109.5 |
120.0 |
| C07 |
N03 |
H203 |
109.4 |
120.0 |
| S28 |
N04 |
H104 |
109.5 |
120.1 |
| S28 |
N04 |
H204 |
109.4 |
120.0 |
| N04 |
S28 |
O24 |
110.7 |
106.4 |
| N04 |
S28 |
O23 |
108.5 |
106.4 |
| N04 |
S28 |
C19 |
109.7 |
107.2 |
| H104 |
N04 |
H204 |
109.4 |
119.9 |
| O25 |
N05 |
O26 |
119.1 |
120.0 |
| C12 |
N05 |
O25 |
119.5 |
120.0 |
| C12 |
N05 |
O26 |
121.4 |
120.0 |
| C07 |
C06 |
C10 |
126.1 |
126.1 |
| C06 |
C10 |
O22 |
120.3 |
120.0 |
| C11 |
C10 |
O22 |
119.4 |
120.0 |
| C14 |
C13 |
H13 |
119.5 |
120.0 |
| C15 |
C14 |
H14 |
120.0 |
119.9 |
| C14 |
C15 |
C16 |
120.3 |
120.1 |
| C14 |
C15 |
H15 |
119.8 |
119.9 |
| C16 |
C15 |
H15 |
119.9 |
120.0 |
| C15 |
C16 |
H16 |
119.6 |
120.0 |
| C18 |
C17 |
H17 |
119.7 |
120.0 |
| C19 |
C18 |
H18 |
120.0 |
119.9 |
| C19 |
C20 |
C21 |
119.9 |
120.0 |
| C19 |
C20 |
H20 |
120.0 |
119.9 |
| C21 |
C20 |
H20 |
120.1 |
120.0 |
| C20 |
C21 |
H21 |
119.7 |
120.0 |
Torsion Angles for X64
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N01 |
C07 |
N03 |
H103 |
0.0 |
359.9 |
| N01 |
C07 |
N03 |
H203 |
120.0 |
180.0 |
| N01 |
C07 |
C06 |
C10 |
178.6 |
180.0 |
| C09 |
N02 |
C08 |
HN02 |
180.0 |
180.1 |
| C07 |
N03 |
H103 |
H203 |
120.0 |
180.0 |
| C07 |
N03 |
H203 |
H103 |
240.0 |
180.0 |
| H104 |
N04 |
S28 |
H204 |
240.0 |
180.0 |
| S28 |
N04 |
H104 |
H204 |
120.0 |
180.0 |
| H104 |
N04 |
S28 |
O24 |
180.0 |
156.4 |
| H104 |
N04 |
S28 |
O23 |
57.8 |
23.5 |
| H104 |
N04 |
S28 |
C19 |
301.5 |
270.0 |
| S28 |
N04 |
H204 |
H104 |
240.0 |
180.0 |
| H204 |
N04 |
S28 |
O24 |
300.0 |
336.5 |
| H204 |
N04 |
S28 |
O23 |
177.7 |
203.5 |
| H204 |
N04 |
S28 |
C19 |
61.5 |
90.1 |
| C12 |
N05 |
O25 |
O26 |
181.3 |
180.1 |
| C12 |
N05 |
O26 |
O25 |
178.7 |
179.9 |
| C11 |
C10 |
C06 |
O22 |
184.8 |
179.9 |
| N01 |
C07 |
C06 |
N03 |
179.3 |
180.0 |
| C06 |
C07 |
N03 |
H103 |
179.3 |
180.0 |
| C06 |
C07 |
N03 |
H203 |
299.3 |
0.0 |
| C07 |
C06 |
C10 |
O22 |
2.1 |
355.0 |
| N01 |
C07 |
N03 |
C06 |
180.7 |
179.9 |
| H103 |
N03 |
C07 |
H203 |
240.0 |
180.0 |
| C08 |
N02 |
C09 |
HN02 |
180.0 |
179.9 |
| C06 |
C10 |
C11 |
O22 |
175.3 |
180.1 |
| O25 |
N05 |
C12 |
O26 |
178.7 |
179.9 |
| C11 |
C12 |
N05 |
O25 |
220.1 |
186.0 |
| C11 |
C12 |
N05 |
O26 |
41.4 |
6.1 |
| C12 |
C11 |
C10 |
O22 |
65.3 |
256.5 |
| C13 |
C12 |
N05 |
O25 |
40.3 |
6.0 |
| C13 |
C12 |
N05 |
O26 |
221.6 |
186.1 |
| C15 |
C14 |
C13 |
H13 |
180.0 |
180.0 |
| C16 |
C15 |
C14 |
H15 |
180.0 |
179.8 |
| C14 |
C15 |
C16 |
H16 |
179.9 |
179.9 |
| H14 |
C14 |
C13 |
H13 |
0.0 |
0.0 |
| H14 |
C14 |
C15 |
C16 |
180.0 |
179.7 |
| H14 |
C14 |
C15 |
H15 |
360.0 |
359.9 |
| C16 |
C15 |
C14 |
H14 |
180.0 |
179.7 |
| C14 |
C15 |
C16 |
H15 |
180.0 |
180.2 |
| H15 |
C15 |
C14 |
H14 |
360.0 |
359.9 |
| C14 |
C15 |
H15 |
C16 |
180.0 |
179.8 |
| H15 |
C15 |
C16 |
H16 |
359.9 |
359.8 |
| C16 |
C11 |
C10 |
O22 |
245.5 |
76.3 |
| H16 |
C16 |
C15 |
H15 |
359.9 |
359.8 |
| C17 |
C09 |
N02 |
HN02 |
181.2 |
333.5 |
| H18 |
C18 |
C17 |
H17 |
0.0 |
0.1 |
| N04 |
S28 |
C19 |
C18 |
34.4 |
90.0 |
| C19 |
C18 |
C17 |
H17 |
180.1 |
180.1 |
| N04 |
S28 |
C19 |
C20 |
213.6 |
269.9 |
| C20 |
C19 |
C18 |
H18 |
179.7 |
180.0 |
| C21 |
C20 |
C19 |
H20 |
180.0 |
179.8 |
| C19 |
C20 |
C21 |
H21 |
179.9 |
180.0 |
| C19 |
C20 |
C21 |
H20 |
180.0 |
180.2 |
| C19 |
C20 |
H20 |
C21 |
180.0 |
179.8 |
| H20 |
C20 |
C21 |
H21 |
359.9 |
359.8 |
| C21 |
C09 |
N02 |
HN02 |
1.6 |
153.2 |
| H21 |
C21 |
C20 |
H20 |
359.9 |
359.8 |
| O24 |
S28 |
N04 |
H104 |
180.0 |
156.4 |
| O24 |
S28 |
N04 |
H204 |
300.0 |
336.5 |
| N04 |
S28 |
O24 |
O23 |
239.3 |
237.1 |
| N04 |
S28 |
O24 |
C19 |
121.3 |
114.1 |
| S27 |
C08 |
N02 |
HN02 |
151.5 |
353.6 |
| O23 |
S28 |
N04 |
H104 |
57.8 |
23.5 |
| O23 |
S28 |
N04 |
H204 |
177.7 |
203.5 |
| N04 |
S28 |
O23 |
O24 |
121.9 |
123.0 |
| N04 |
S28 |
O23 |
C19 |
241.9 |
245.9 |
| C19 |
S28 |
N04 |
H104 |
301.5 |
270.0 |
| C19 |
S28 |
N04 |
H204 |
61.5 |
90.1 |
| N04 |
S28 |
C19 |
O24 |
238.1 |
246.4 |
| N04 |
S28 |
C19 |
O23 |
117.4 |
113.5 |
| S28 |
C19 |
C18 |
H18 |
358.9 |
360.0 |
| S28 |
C19 |
C20 |
H20 |
1.1 |
360.0 |