PDB Chemical Component X32

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for X32

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C2 C1 1.392 1.383
C1 C6 1.395 1.382
C1 H1 1.080 1.080
C2 C3 1.394 1.382
C2 H2 1.080 1.079
C3 C4 1.386 1.382
C3 H3 1.080 1.081
C4 C7 1.511 1.507
C4 C5 1.397 1.382
C6 C5 1.393 1.382
C5 H5 1.080 1.080
C6 H6 1.081 1.081
C7 O8 1.428 1.452
C7 H7 1.100 1.090
C7 H7A 1.100 1.090
O8 C9 1.434 1.346
C9 O22 1.230 1.215
C9 N10 1.315 1.347
N10 C11 1.436 1.465
N10 HN10 1.000 0.970
C11 P12 1.803 1.823
C11 H11 1.100 1.089
C11 H11A 1.100 1.089
O24 P12 1.497 1.480
O23 P12 1.507 1.610
P12 N13 1.669 1.683
N13 C14 1.473 1.469
N13 HN13 1.000 1.009
C15 C14 1.508 1.507
C14 C25 1.522 1.530
C14 H14 1.100 1.090
N16 C15 1.333 1.348
C15 O29 1.235 1.213
C17 N16 1.466 1.465
N16 HN16 1.000 0.970
C18 C17 1.496 1.507
C17 C30 1.517 1.530
C17 H17 1.100 1.090
O37 C18 1.253 1.209
O19 C18 1.265 1.342
O19 HO19 0.950 0.967
O23 HO23 0.950 0.967
C25 C26 1.528 1.529
C25 H25 1.100 1.091
C25 H25A 1.100 1.090
C28 C26 1.530 1.530
C26 C27 1.520 1.530
C26 H26 1.100 1.090
C27 H27 1.100 1.090
C27 H27A 1.100 1.090
C27 H27B 1.100 1.090
C28 H28 1.100 1.090
C28 H28A 1.100 1.090
C28 H28B 1.100 1.089
C30 C31 1.504 1.507
C30 H30 1.099 1.091
C30 H30A 1.100 1.090
C36 C31 1.397 1.382
C31 C32 1.372 1.382
C32 C33 1.386 1.383
C32 H32 1.080 1.080
C34 C33 1.396 1.383
C33 H33 1.080 1.080
C35 C34 1.390 1.382
C34 H34 1.080 1.080
C36 C35 1.386 1.383
C35 H35 1.080 1.080
C36 H36 1.080 1.081

Bond Angles for X32

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 118.8 120.0
C2 C1 H1 120.6 120.0
C1 C2 H2 119.4 120.0
C6 C1 H1 120.6 120.0
C1 C6 C5 120.1 120.0
C1 C6 H6 120.0 120.0
C2 C3 C4 119.7 120.0
C2 C3 H3 120.2 120.0
C4 C3 H3 120.2 120.0
C3 C4 C7 119.5 120.0
C3 C4 C5 119.5 120.0
C4 C7 O8 117.4 109.5
C4 C7 H7 107.4 109.5
C4 C7 H7A 107.5 109.4
C4 C5 H5 119.7 120.0
C6 C5 H5 119.7 120.0
C5 C6 H6 120.0 120.0
O8 C7 H7 107.5 109.5
O8 C7 H7A 107.4 109.5
C7 O8 C9 117.9 117.0
H7 C7 H7A 109.5 109.5
O8 C9 O22 119.6 120.0
O8 C9 N10 117.3 120.0
O22 C9 N10 123.1 120.0
C9 N10 C11 122.3 120.0
C9 N10 HN10 118.8 120.0
C11 N10 HN10 118.8 120.0
N10 C11 P12 112.0 109.5
N10 C11 H11 108.8 109.5
N10 C11 H11A 108.8 109.5
P12 C11 H11 108.8 109.5
P12 C11 H11A 108.8 109.5
C11 P12 N13 101.0 109.5
H11 C11 H11A 109.5 109.5
O24 P12 N13 107.4 109.5
O23 P12 N13 112.3 109.4
P12 N13 C14 122.7 111.0
P12 N13 HN13 106.1 111.0
C14 N13 HN13 106.1 111.0
N13 C14 C25 107.0 109.5
N13 C14 H14 109.5 109.5
C15 C14 C25 109.9 109.5
C15 C14 H14 109.1 109.5
C25 C14 H14 108.9 109.4
C14 C25 C26 113.3 109.5
C14 C25 H25 108.5 109.5
C14 C25 H25A 108.5 109.5
C17 N16 HN16 120.9 120.0
C18 C17 C30 113.5 109.5
C18 C17 H17 106.4 109.5
C30 C17 H17 106.2 109.4
C17 C30 C31 109.9 109.5
C17 C30 H30 109.4 109.5
C17 C30 H30A 109.4 109.5
C26 C25 H25 108.5 109.5
C26 C25 H25A 108.5 109.5
C25 C26 C27 108.9 109.5
C25 C26 H26 107.8 109.5
H25 C25 H25A 109.5 109.5
C28 C26 H26 107.7 109.4
C27 C26 H26 107.9 109.5
C26 C27 H27 109.5 109.5
C26 C27 H27A 109.5 109.5
C26 C27 H27B 109.5 109.4
H27 C27 H27A 109.5 109.5
H27 C27 H27B 109.5 109.4
H27A C27 H27B 109.5 109.5
H28 C28 H28A 109.5 109.4
H28 C28 H28B 109.5 109.5
H28A C28 H28B 109.4 109.5
C31 C30 H30 109.4 109.5
C31 C30 H30A 109.3 109.5
C30 C31 C32 118.5 120.0
H30 C30 H30A 109.5 109.4
C36 C31 C32 121.1 120.0
C31 C32 C33 119.4 120.0
C31 C32 H32 120.3 120.1
C33 C32 H32 120.3 120.0
C32 C33 H33 120.1 120.0
C34 C33 H33 120.1 120.0
C35 C34 C33 120.7 120.0
C35 C34 H34 119.7 120.0
C36 C35 C34 119.1 120.0
C34 C35 H35 120.5 120.0
C36 C35 H35 120.5 120.0
C35 C36 H36 120.1 120.0

Torsion Angles for X32

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C1 C2 H1 180.0 180.0
C2 C1 C6 C5 0.5 359.9
C2 C1 C6 H6 180.5 180.0
C1 C2 C3 C4 359.3 360.0
C1 C2 C3 H3 179.2 179.8
C2 C1 C6 H1 180.0 180.0
C6 C1 C2 H2 180.1 180.1
C1 C6 C5 H5 179.6 179.9
C5 C6 C1 H6 180.0 179.9
C2 C1 H1 C6 180.0 180.0
H1 C1 C2 H2 0.0 0.0
H1 C1 C6 C5 180.5 180.0
H1 C1 C6 H6 0.5 0.0
C4 C3 C2 H3 180.0 180.2
C2 C3 C4 C7 180.0 179.7
C2 C3 C4 C5 0.8 0.1
H2 C2 C1 C6 180.1 180.1
H2 C2 C1 H1 0.0 0.0
H2 C2 C3 C4 179.3 179.9
H2 C2 C3 H3 359.3 359.7
C2 C3 C4 H3 180.0 179.8
C3 C4 C7 O8 90.5 90.0
C3 C4 C7 H7 211.6 210.0
C3 C4 C7 H7A 329.4 330.0
C3 C4 C5 H5 179.7 180.0
C2 C3 H3 C4 180.0 180.2
H3 C3 C4 C7 360.0 359.9
H3 C3 C4 C5 180.9 180.4
C7 C4 C3 H3 360.0 359.9
C3 C4 C7 C5 180.9 180.4
C7 C4 C5 H5 0.6 0.5
O8 C7 C4 H7 238.9 240.0
O8 C7 C4 H7A 121.1 120.0
C4 C7 O8 C9 100.0 180.0
H7 C7 C4 H7A 242.2 240.0
C5 C4 C3 H3 180.9 180.4
C3 C4 C5 C7 179.1 179.6
C6 C5 C4 H5 180.0 179.7
C4 C5 C6 H6 179.6 180.1
C5 C6 C1 H1 180.5 180.0
C1 C6 C5 H6 180.0 180.1
C3 C4 C5 C6 359.7 359.8
C4 C5 C6 H5 180.0 180.3
H5 C5 C6 H6 359.6 359.9
H6 C6 C1 H1 0.5 0.0
C1 C6 H6 C5 180.0 179.9
H6 C6 C5 H5 359.6 359.9
C4 C7 O8 H7 121.1 120.0
C4 C7 O8 H7A 238.9 240.0
H7 C7 O8 H7A 117.8 120.0
C7 O8 C9 O22 354.5 0.1
C7 O8 C9 N10 176.5 180.0
C4 C7 H7 O8 232.8 240.0
C4 C7 H7 H7A 116.4 120.0
O8 C7 H7 H7A 243.6 240.0
H7 C7 O8 C9 338.9 60.0
C4 C7 H7A O8 127.1 120.0
C4 C7 H7A H7 243.6 240.0
O8 C7 H7A H7 116.4 120.0
H7A C7 O8 C9 221.1 299.9
C9 O8 C7 H7 338.9 60.0
C9 O8 C7 H7A 221.1 299.9
O22 C9 O8 N10 178.0 180.0
O8 C9 N10 C11 179.8 180.0
O8 C9 N10 HN10 359.8 360.0
O8 C9 O22 N10 182.1 180.0
O22 C9 N10 C11 1.8 360.0
O22 C9 N10 HN10 181.8 180.0
O8 C9 N10 O22 178.0 180.0
C11 N10 C9 HN10 180.0 180.0
C9 N10 C11 P12 205.2 95.0
C9 N10 C11 H11 325.6 215.0
C9 N10 C11 H11A 84.9 335.0
C9 N10 C11 HN10 180.0 180.0
P12 C11 N10 H11 239.6 240.0
P12 C11 N10 H11A 120.4 120.0
N10 C11 P12 N13 186.6 180.0
H11 C11 N10 H11A 240.7 240.0
C9 N10 HN10 C11 180.0 180.0
HN10 N10 C11 P12 25.2 275.0
HN10 N10 C11 H11 145.6 35.0
HN10 N10 C11 H11A 264.9 155.0
P12 C11 N10 HN10 25.2 275.0
N10 C11 P12 H11 120.4 120.0
N10 C11 P12 H11A 239.6 240.0
H11 C11 P12 H11A 119.2 120.0
O24 P12 C11 N13 114.3 120.0
O23 P12 C11 N13 241.5 240.0
C11 P12 N13 C14 137.1 174.9
C11 P12 N13 HN13 258.9 298.8
H11 C11 N10 HN10 145.6 35.0
N10 C11 H11 P12 237.7 240.0
N10 C11 H11 H11A 118.9 120.0
P12 C11 H11 H11A 241.2 240.0
H11 C11 P12 N13 66.2 60.0
H11A C11 N10 HN10 264.9 155.0
N10 C11 H11A P12 122.3 120.0
N10 C11 H11A H11 241.2 240.0
P12 C11 H11A H11 118.8 120.0
H11A C11 P12 N13 307.0 300.0
O24 P12 C11 H11 180.5 180.0
O24 P12 C11 H11A 61.3 60.0
C11 P12 O24 N13 249.7 240.0
O23 P12 O24 N13 125.0 120.0
O24 P12 N13 C14 19.0 54.9
O24 P12 N13 HN13 140.8 178.8
O23 P12 C11 H11 307.8 300.0
O23 P12 C11 H11A 188.6 180.0
C11 P12 O23 N13 111.1 120.0
O24 P12 O23 N13 237.7 240.0
O23 P12 N13 C14 253.2 294.9
O23 P12 N13 HN13 15.0 58.8
N13 P12 C11 H11 66.2 60.0
N13 P12 C11 H11A 307.0 300.0
C14 N13 P12 HN13 238.2 236.1
P12 N13 C14 C25 159.5 143.8
P12 N13 C14 H14 41.6 23.9
P12 N13 C14 HN13 121.9 124.0
C15 C14 N13 C25 120.7 120.0
C15 C14 N13 H14 238.6 240.0
C25 C14 N13 H14 117.9 119.9
N13 C14 C25 C26 183.9 294.9
N13 C14 C25 H25 304.5 54.9
N13 C14 C25 H25A 63.4 174.9
P12 N13 HN13 C14 228.0 236.0
HN13 N13 C14 C25 37.6 19.9
HN13 N13 C14 H14 279.7 259.9
C15 C14 N13 HN13 158.3 139.9
N13 C14 C15 C25 241.0 240.0
N13 C14 C15 H14 121.7 120.0
C25 C14 C15 H14 240.7 240.0
C15 C14 C25 C26 61.6 174.9
C15 C14 C25 H25 182.2 294.8
C15 C14 C25 H25A 301.1 54.8
C25 C14 N13 HN13 37.6 19.9
N13 C14 C25 H14 241.7 240.0
C15 C14 C25 H14 119.4 120.0
C26 C25 C14 H25 239.4 240.0
C26 C25 C14 H25A 120.6 120.0
C14 C25 C26 C27 191.8 173.9
C14 C25 C26 H26 308.6 53.9
H25 C25 C14 H25A 241.1 240.0
H14 C14 N13 HN13 279.7 259.9
N13 C14 H14 C25 116.7 120.0
C15 C14 H14 C25 240.1 240.0
H14 C14 C25 C26 302.2 54.9
H14 C14 C25 H25 62.8 174.8
H14 C14 C25 H25A 181.7 294.8
N16 C15 C14 H14 204.5 59.9
O29 C15 C14 C25 264.3 120.0
O29 C15 C14 H14 23.6 240.0
C18 C17 N16 HN16 32.7 94.9
C30 C17 C18 H17 243.5 240.0
C18 C17 C30 C31 303.1 175.0
C18 C17 C30 H30 63.2 295.0
C18 C17 C30 H30A 183.1 55.0
C30 C17 N16 HN16 264.5 334.9
C18 C17 C30 H17 116.7 120.0
C31 C30 C17 H30 239.9 240.0
C31 C30 C17 H30A 120.1 120.0
C17 C30 C31 C32 261.9 90.0
H30 C30 C17 H30A 240.1 240.0
H17 C17 N16 HN16 148.7 215.0
C18 C17 H17 C30 238.7 240.0
H17 C17 C30 C31 186.5 55.0
H17 C17 C30 H30 306.5 175.0
H17 C17 C30 H30A 66.4 295.0
O37 C18 C17 C30 297.2 120.0
O37 C18 C17 H17 53.7 240.0
O19 C18 C17 H17 237.0 60.0
HO23 O23 P12 N13 122.3 304.9
C26 C25 C14 H14 302.2 54.9
C14 C25 C26 H25 120.6 120.0
C14 C25 C26 H25A 239.5 240.0
H25 C25 C26 H25A 118.9 120.0
C28 C26 C25 H26 119.0 240.0
C27 C26 C25 H26 243.2 120.0
C25 C26 C27 H27 180.0 59.9
C25 C26 C27 H27A 300.0 180.0
C25 C26 C27 H27B 60.0 300.0
H25 C25 C14 H14 62.8 174.8
C14 C25 H25 C26 236.5 240.0
C14 C25 H25 H25A 118.3 120.0
C26 C25 H25 H25A 241.8 240.0
H25 C25 C26 C27 71.2 54.0
H25 C25 C26 H26 188.0 293.9
H25A C25 C14 H14 181.7 294.8
C14 C25 H25A C26 123.5 120.0
C14 C25 H25A H25 241.7 240.0
C26 C25 H25A H25 118.2 120.0
H25A C25 C26 C27 312.3 294.0
H25A C25 C26 H26 69.1 173.9
C28 C26 C25 H25 306.9 173.9
C28 C26 C25 H25A 188.1 53.9
C25 C26 C28 H26 241.0 120.0
C27 C26 C28 H26 118.1 240.1
C28 C26 C27 H27 305.2 299.9
C28 C26 C27 H27A 65.2 60.0
C28 C26 C27 H27B 185.3 180.0
C27 C26 C25 H25 71.2 54.0
C27 C26 C25 H25A 312.3 294.0
C25 C26 C27 H26 116.7 239.9
C28 C26 C27 H26 242.0 119.9
H27 C27 C26 H27A 240.0 239.9
H27 C27 C26 H27B 120.0 119.9
H27A C27 C26 H27B 240.0 240.0
H26 C26 C25 H25 188.0 293.9
H26 C26 C25 H25A 69.1 173.9
C25 C26 H26 C27 242.6 120.1
H26 C26 C27 H27 63.3 180.0
H26 C26 C27 H27A 183.3 300.1
H26 C26 C27 H27B 303.3 60.1
H27 C27 C26 H26 63.3 180.0
C26 C27 H27 H27A 120.0 120.1
C26 C27 H27 H27B 240.0 240.1
H27A C27 H27 H27B 120.0 120.0
H27A C27 C26 H26 183.3 300.1
C26 C27 H27A H27 240.0 240.0
C26 C27 H27A H27B 120.0 120.0
H27 C27 H27A H27B 240.0 240.0
H27B C27 C26 H26 303.3 60.1
C26 C27 H27B H27 120.0 119.9
C26 C27 H27B H27A 240.0 240.0
H27 C27 H27B H27A 120.0 120.0
H28 C28 C26 H26 299.0 300.0
H28A C28 H28 H28B 120.0 120.1
H28A C28 C26 H26 59.0 59.9
H28 C28 H28A H28B 240.0 240.0
H28B C28 C26 H26 179.0 180.0
H28 C28 H28B H28A 120.0 120.0
C31 C30 C17 H17 186.5 55.0
C17 C30 C31 H30 120.1 120.0
C17 C30 C31 H30A 239.9 240.0
H30 C30 C31 H30A 119.9 120.0
C36 C31 C30 C32 182.6 180.3
C30 C31 C32 C33 181.2 180.0
C30 C31 C32 H32 1.2 360.0
H30 C30 C17 H17 306.5 175.0
C17 C30 H30 C31 239.6 240.0
C17 C30 H30 H30A 119.8 120.0
C31 C30 H30 H30A 240.2 240.0
H30 C30 C31 C32 141.8 330.0
H30A C30 C17 H17 66.4 295.0
C17 C30 H30A C31 120.4 120.1
C17 C30 H30A H30 240.2 240.0
C31 C30 H30A H30 119.8 120.0
H30A C30 C31 C32 21.9 210.0
C36 C31 C30 H30 324.4 150.3
C36 C31 C30 H30A 204.5 30.3
C30 C31 C36 C32 177.4 179.7
C36 C31 C32 C33 358.6 359.7
C36 C31 C32 H32 178.6 179.7
C32 C31 C30 H30 141.8 330.0
C32 C31 C30 H30A 21.9 210.0
C33 C32 C31 H32 180.0 180.0
C31 C32 C33 H33 180.3 180.0
C31 C32 C33 H32 180.0 180.0
C34 C33 C32 H33 180.0 180.1
C35 C34 C33 C32 0.3 0.2
C31 C32 H32 C33 180.0 180.0
H32 C32 C33 H33 0.3 360.0
C34 C33 C32 H32 180.3 180.1
C32 C33 C34 H33 180.0 179.9
C35 C34 C33 H34 180.0 180.1
C36 C35 C34 C33 0.2 359.8
C33 C34 C35 H35 180.2 179.8
H33 C33 C32 H32 0.3 360.0
C35 C34 C33 H33 180.3 180.3
C36 C35 C34 H35 180.0 180.0
C34 C35 C36 H36 178.8 180.0
H34 C34 C33 H33 0.3 0.1
C35 C34 H34 C33 180.0 179.9
C36 C35 C34 H34 180.2 180.0
H34 C34 C35 H35 0.2 360.0
C35 C36 C31 C32 1.9 0.3
C34 C35 C36 H35 180.0 180.0
H35 C35 C34 C33 180.2 179.8
H35 C35 C34 H34 0.2 360.0
C36 C35 H35 C34 180.0 180.0
H35 C35 C36 H36 358.7 0.0
H36 C36 C31 C32 181.9 180.2
H36 C36 C35 C34 178.8 180.0
H36 C36 C35 H35 358.7 0.0