PDB Chemical Component X2M

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for X2M

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C3	C5	1.401	1.468
C3	O4	1.229	1.218
C3	N1	1.341	1.344
C5	C7	1.399	1.480
C5	C19	1.422	1.381
C6	C7	1.412	1.402
C6	C11	1.403	1.390
C6	N1	1.334	1.389
C7	C8	1.397	1.390
C8	C9	1.396	1.380
C9	C10	1.387	1.385
C10	C11	1.396	1.381
C19	C21	1.404	1.410
C21	C26	1.413	1.387
C21	N22	1.333	1.379
C26	C25	1.342	1.395
C26	CAB	1.543	1.508
C25	C24	1.342	1.357
C24	N22	1.337	1.358
C24	CAA	1.536	1.507
N1	H1	1.000	0.971
C19	H19	1.080	1.080
C11	H11	1.080	1.080
C8	H8	1.080	1.081
C9	H9	1.081	1.080
C10	H10	1.080	1.080
N22	H22	1.000	0.970
C25	H25	1.080	1.080
CAB	HAB1	1.100	1.091
CAB	HAB2	1.100	1.090
CAB	HAB3	1.100	1.090
CAA	HAA1	1.100	1.090
CAA	HAA2	1.100	1.089
CAA	HAA3	1.100	1.091

Bond Angles for X2M

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C5	C3	O4	126.3	126.0
C5	C3	N1	111.1	108.0
C3	C5	C7	104.5	105.1
C3	C5	C19	130.3	127.5
O4	C3	N1	122.5	126.0
C3	N1	C6	108.1	111.4
C3	N1	H1	126.0	124.3
C7	C5	C19	125.2	127.4
C5	C7	C6	107.1	106.3
C5	C7	C8	133.5	133.3
C5	C19	C21	126.6	120.0
C5	C19	H19	116.7	120.0
C7	C6	C11	119.9	119.1
C7	C6	N1	109.1	109.1
C6	C7	C8	119.4	120.3
C11	C6	N1	131.0	131.8
C6	C11	C10	120.7	120.1
C6	C11	H11	119.7	119.9
C6	N1	H1	125.9	124.3
C7	C8	C9	119.3	119.8
C7	C8	H8	120.3	120.1
C8	C9	C10	122.2	120.1
C9	C8	H8	120.3	120.1
C8	C9	H9	118.9	120.0
C9	C10	C11	118.5	120.6
C10	C9	H9	118.9	119.9
C9	C10	H10	120.8	119.7
C10	C11	H11	119.6	120.0
C11	C10	H10	120.7	119.6
C19	C21	C26	123.2	126.4
C19	C21	N22	132.0	126.2
C21	C19	H19	116.7	119.9
C26	C21	N22	104.8	107.4
C21	C26	C25	110.4	107.1
C21	C26	CAB	126.0	126.4
C21	N22	C24	108.4	108.6
C21	N22	H22	125.8	125.7
C25	C26	CAB	123.6	126.5
C26	C25	C24	104.3	108.0
C26	C25	H25	127.9	126.0
C26	CAB	HAB1	109.5	109.4
C26	CAB	HAB2	109.5	109.4
C26	CAB	HAB3	109.5	109.5
C25	C24	N22	112.1	108.9
C25	C24	CAA	125.4	125.6
C24	C25	H25	127.9	126.0
N22	C24	CAA	122.5	125.5
C24	N22	H22	125.8	125.7
C24	CAA	HAA1	109.5	109.4
C24	CAA	HAA2	109.5	109.5
C24	CAA	HAA3	109.4	109.4
HAB1	CAB	HAB2	109.5	109.5
HAB1	CAB	HAB3	109.4	109.5
HAB2	CAB	HAB3	109.5	109.6
HAA1	CAA	HAA2	109.4	109.5
HAA1	CAA	HAA3	109.5	109.5
HAA2	CAA	HAA3	109.5	109.5

Torsion Angles for X2M

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O4	C3	C5	N1	179.3	180.2
C5	C3	N1	C6	358.8	0.3
C5	C3	N1	H1	178.7	180.0
C7	C5	C3	C19	179.7	180.0
C3	C5	C7	C6	0.2	360.0
C3	C5	C7	C8	180.2	180.0
C3	C5	C19	C21	3.5	352.6
C3	C5	C19	H19	183.5	172.5
C5	C3	O4	N1	180.8	179.8
O4	C3	C5	C7	180.0	180.0
O4	C3	C5	C19	0.3	360.0
O4	C3	N1	C6	179.4	180.2
O4	C3	N1	H1	359.4	359.9
C5	C3	N1	O4	179.3	180.2
N1	C3	C5	C7	0.7	359.8
N1	C3	C5	C19	180.9	179.8
C7	C6	N1	C3	1.3	359.6
C11	C6	N1	C3	179.6	180.0
C6	N1	C3	H1	180.0	180.3
C7	C5	C3	O4	180.0	180.0
C7	C5	C3	N1	0.7	359.8
C3	C5	C7	C19	180.3	180.0
C7	C5	C19	C21	183.9	172.5
C7	C5	C19	H19	3.8	352.5
C5	C7	C6	C11	180.6	179.9
C5	C7	C6	N1	359.1	0.2
C6	C7	C5	C8	180.0	180.0
C5	C7	C8	C9	179.4	180.0
C5	C7	C8	H8	359.4	0.0
C19	C5	C3	O4	0.3	360.0
C19	C5	C3	N1	180.9	179.8
C3	C5	C19	C7	179.7	180.0
C19	C5	C7	C6	179.9	180.0
C19	C5	C7	C8	359.9	360.0
C5	C19	C21	C26	175.3	146.4
C5	C19	C21	N22	353.6	326.1
C21	C19	C5	H19	180.0	180.0
C3	N1	C6	C7	1.3	359.6
C6	C7	C5	C19	179.9	180.0
C5	C7	C6	C8	180.0	180.0
C11	C6	C7	N1	181.5	179.7
C7	C6	C11	C10	359.9	0.1
C7	C6	C11	H11	179.9	180.0
C7	C6	N1	H1	181.3	179.9
C6	C7	C8	C9	359.4	360.0
C6	C7	C8	H8	179.4	180.0
C3	N1	C6	C11	179.6	180.0
C7	C6	C11	N1	178.2	180.4
C11	C6	C7	C8	0.6	360.0
C11	C6	N1	H1	359.6	0.3
C9	C10	C11	C6	359.7	359.9
C10	C11	C6	H11	180.0	180.1
C6	C11	C10	H10	179.7	180.0
C3	N1	C6	H1	180.0	179.7
C7	C6	N1	C11	181.7	179.7
N1	C6	C7	C8	179.1	180.2
N1	C6	C11	C10	181.7	179.7
N1	C6	C11	H11	1.7	359.7
C8	C7	C5	C19	359.9	360.0
C5	C7	C8	C6	180.0	180.0
C8	C7	C6	C11	0.6	360.0
C8	C7	C6	N1	179.1	180.2
C7	C8	C9	C10	0.2	0.0
C9	C8	C7	H8	180.0	180.0
C7	C8	C9	H9	180.2	180.0
C7	C8	C9	H8	180.0	180.0
C8	C9	C10	C11	0.3	0.0
C10	C9	C8	H9	180.0	180.0
C8	C9	C10	H10	180.3	179.9
C6	C11	C10	C9	359.7	359.9
C10	C9	C8	H8	180.2	180.0
C8	C9	C10	H9	180.0	180.0
C9	C10	C11	H11	179.7	180.0
C11	C10	C9	H10	180.0	180.1
C10	C11	C6	N1	181.7	179.7
C6	C11	C10	H11	180.0	179.9
C11	C10	C9	H9	180.3	180.0
C9	C10	C11	H10	180.0	179.9
C5	C19	C21	H19	180.0	180.0
C26	C21	C19	N22	181.7	180.3
C19	C21	C26	C25	178.2	180.0
C19	C21	C26	CAB	359.1	360.0
C19	C21	N22	C24	181.6	179.9
C19	C21	N22	H22	1.6	359.9
C19	C21	C26	N22	178.7	179.8
C26	C21	C19	H19	355.3	326.4
C26	C21	N22	C24	0.1	359.6
C26	C21	N22	H22	180.1	179.7
C25	C26	C21	CAB	179.1	180.1
C21	C26	C25	C24	0.7	360.0
C21	C26	C25	H25	180.7	180.0
C21	C26	CAB	HAB1	94.2	90.0
C21	C26	CAB	HAB2	214.2	210.0
C21	C26	CAB	HAB3	334.2	330.0
C19	C21	N22	C26	181.5	180.2
N22	C21	C19	H19	173.6	146.1
N22	C21	C26	C25	359.5	0.2
N22	C21	C26	CAB	180.5	180.2
C25	C24	N22	C21	0.4	0.3
C21	N22	C24	CAA	180.4	180.2
C24	N22	C21	H22	180.0	179.9
C25	C26	C21	N22	359.5	0.2
C21	C26	C25	CAB	180.9	179.9
C25	C26	CAB	HAB1	275.2	270.0
C25	C26	CAB	HAB2	35.2	29.9
C25	C26	CAB	HAB3	155.3	150.0
C26	C25	C24	N22	359.3	359.8
C26	C25	C24	CAA	179.4	180.0
C24	C25	C26	H25	180.0	180.0
CAB	C26	C21	N22	180.5	180.2
C21	C26	CAB	C25	179.0	180.1
CAB	C26	C25	C24	179.8	180.0
CAB	C26	C25	H25	359.8	0.0
HAB1	CAB	C26	HAB2	240.0	240.1
HAB1	CAB	C26	HAB3	120.0	120.0
HAB2	CAB	C26	HAB3	240.0	239.9
C21	N22	C24	C25	0.4	0.3
C24	C25	C26	CAB	179.8	180.0
C26	C25	C24	H25	180.0	180.0
N22	C24	C25	CAA	180.0	179.8
C25	C24	N22	H22	180.3	180.3
C25	C24	CAA	HAA1	265.6	90.0
C25	C24	CAA	HAA2	25.6	210.1
C25	C24	CAA	HAA3	145.6	330.1
C21	N22	C24	H22	180.0	180.1
C25	C24	N22	CAA	180.0	180.2
N22	C24	C25	H25	179.3	179.8
N22	C24	CAA	HAA1	85.6	270.2
N22	C24	CAA	HAA2	205.6	30.3
N22	C24	CAA	HAA3	325.6	150.3
C25	C24	CAA	N22	180.0	179.8
CAA	C24	C25	H25	359.3	360.0
CAA	C24	N22	H22	0.3	0.1
HAA1	CAA	C24	HAA2	240.0	239.9
HAA1	CAA	C24	HAA3	120.0	120.0
HAA2	CAA	C24	HAA3	240.0	240.0
C3	N1	H1	C6	180.0	180.3
C5	C19	H19	C21	180.0	180.0
H19	C19	C21	C26	355.3	326.4
H19	C19	C21	N22	173.6	146.1
H11	C11	C6	N1	1.7	359.7
C6	C11	H11	C10	180.0	180.1
H11	C11	C10	H10	359.7	0.1
C7	C8	H8	C9	180.0	180.0
H8	C8	C9	C10	180.2	180.0
H8	C8	C9	H9	0.2	0.0
C8	C9	H9	C10	180.0	180.0
H9	C9	C8	H8	0.2	0.0
H9	C9	C10	C11	180.3	180.0
H9	C9	C10	H10	0.3	359.9
C9	C10	H10	C11	180.0	180.1
H10	C10	C9	H9	0.3	359.9
H10	C10	C11	H11	359.7	0.1
C21	N22	H22	C24	180.0	179.9
H22	N22	C24	CAA	0.3	0.1
H25	C25	C26	CAB	359.8	0.0
C26	C25	H25	C24	180.0	180.0
H25	C25	C24	N22	179.3	179.8
H25	C25	C24	CAA	359.3	360.0
C26	CAB	HAB1	HAB2	120.0	119.9
C26	CAB	HAB1	HAB3	240.0	240.0
HAB2	CAB	HAB1	HAB3	120.0	120.1
C26	CAB	HAB2	HAB1	240.0	240.1
C26	CAB	HAB2	HAB3	120.0	120.0
HAB1	CAB	HAB2	HAB3	240.0	240.0
C26	CAB	HAB3	HAB1	120.0	120.0
C26	CAB	HAB3	HAB2	240.0	240.0
HAB1	CAB	HAB3	HAB2	120.0	120.0
C24	CAA	HAA1	HAA2	120.0	120.1
C24	CAA	HAA1	HAA3	240.0	240.1
HAA2	CAA	HAA1	HAA3	120.0	120.0
C24	CAA	HAA2	HAA1	240.0	240.0
C24	CAA	HAA2	HAA3	120.0	119.9
HAA1	CAA	HAA2	HAA3	240.0	240.0
C24	CAA	HAA3	HAA1	120.0	119.9
C24	CAA	HAA3	HAA2	240.0	240.0
HAA1	CAA	HAA3	HAA2	119.9	120.0