PDB Chemical Component X19

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for X19

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
N01	N02	1.364	1.288
N01	C06	1.338	1.370
N02	C04	1.364	1.301
N03	C12	1.359	1.348
N03	C13	1.473	1.465
C04	C05	1.400	1.402
C04	C07	1.524	1.508
C05	C06	1.418	1.371
C05	C10	1.519	1.504
C06	C12	1.500	1.472
C07	C08	1.570	1.533
C08	C09	1.575	1.530
C09	C10	1.555	1.536
C09	C11	1.602	1.530
C11	C14	1.559	1.530
C11	C15	1.560	1.531
C11	C16	1.573	1.530
C12	O18	1.223	1.216
C16	C17	1.545	1.530
N01	HN01	1.000	0.970
N03	HN03	1.000	0.970
C07	H07	1.100	1.090
C07	H07A	1.100	1.090
C08	H08	1.100	1.091
C08	H08A	1.100	1.089
C09	H09	1.100	1.089
C10	H10	1.100	1.090
C10	H10A	1.100	1.090
C13	H13	1.100	1.090
C13	H13A	1.100	1.090
C13	H13B	1.101	1.090
C14	H14	1.100	1.089
C14	H14A	1.100	1.091
C14	H14B	1.100	1.089
C15	H15	1.100	1.090
C15	H15A	1.100	1.090
C15	H15B	1.100	1.090
C16	H16	1.100	1.090
C16	H16A	1.100	1.090
C17	H17	1.100	1.090
C17	H17A	1.100	1.090
C17	H17B	1.100	1.090

Bond Angles for X19

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
N02	N01	C06	106.4	109.7
N01	N02	C04	112.5	110.8
N02	N01	HN01	126.8	125.2
N01	C06	C05	109.2	105.9
N01	C06	C12	126.7	127.0
C06	N01	HN01	126.8	125.1
N02	C04	C05	104.9	107.7
N02	C04	C07	131.6	129.1
C12	N03	C13	121.6	120.0
N03	C12	C06	114.1	120.0
N03	C12	O18	121.8	120.0
C12	N03	HN03	119.2	120.0
C13	N03	HN03	119.2	120.1
N03	C13	H13	109.5	109.5
N03	C13	H13A	109.4	109.5
N03	C13	H13B	109.5	109.5
C05	C04	C07	123.5	123.2
C04	C05	C06	107.0	105.9
C04	C05	C10	122.9	124.2
C04	C07	C08	111.5	108.2
C04	C07	H07	108.8	109.7
C04	C07	H07A	108.8	109.7
C06	C05	C10	130.1	129.9
C05	C06	C12	124.1	127.0
C05	C10	C09	111.5	108.1
C05	C10	H10	108.8	109.7
C05	C10	H10A	108.8	109.8
C06	C12	O18	124.1	120.0
C07	C08	C09	112.0	109.9
C08	C07	H07	108.8	109.8
C08	C07	H07A	108.8	109.7
C07	C08	H08	108.6	109.4
C07	C08	H08A	108.7	109.5
C08	C09	C10	108.5	109.7
C08	C09	C11	114.4	109.4
C09	C08	H08	108.6	109.4
C09	C08	H08A	108.7	109.4
C08	C09	H09	108.1	109.4
C10	C09	C11	113.2	109.4
C10	C09	H09	109.4	109.4
C09	C10	H10	108.8	109.7
C09	C10	H10A	108.8	109.7
C09	C11	C14	112.0	109.4
C09	C11	C15	111.1	109.5
C09	C11	C16	107.2	109.5
C11	C09	H09	102.9	109.5
C14	C11	C15	107.2	109.5
C14	C11	C16	111.4	109.5
C11	C14	H14	109.5	109.5
C11	C14	H14A	109.4	109.4
C11	C14	H14B	109.5	109.5
C15	C11	C16	107.9	109.5
C11	C15	H15	109.5	109.5
C11	C15	H15A	109.5	109.4
C11	C15	H15B	109.4	109.4
C11	C16	C17	118.7	109.5
C11	C16	H16	106.5	109.5
C11	C16	H16A	106.5	109.5
C17	C16	H16	106.5	109.5
C17	C16	H16A	106.5	109.5
C16	C17	H17	109.5	109.5
C16	C17	H17A	109.4	109.5
C16	C17	H17B	109.5	109.5
H07	C07	H07A	110.1	109.8
H08	C08	H08A	110.3	109.3
H10	C10	H10A	110.1	109.8
H13	C13	H13A	109.5	109.5
H13	C13	H13B	109.5	109.5
H13A	C13	H13B	109.5	109.4
H14	C14	H14A	109.4	109.5
H14	C14	H14B	109.5	109.5
H14A	C14	H14B	109.5	109.5
H15	C15	H15A	109.5	109.5
H15	C15	H15B	109.5	109.5
H15A	C15	H15B	109.5	109.5
H16	C16	H16A	112.3	109.5
H17	C17	H17A	109.5	109.5
H17	C17	H17B	109.4	109.4
H17A	C17	H17B	109.5	109.4

Torsion Angles for X19

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
N02	N01	C06	C05	0.0	0.1
N02	N01	C06	C12	180.1	180.0
C06	N01	N02	HN01	180.0	180.2
N01	N02	C04	C05	0.1	359.9
N01	N02	C04	C07	180.0	179.6
C06	N01	N02	C04	359.9	0.0
N02	N01	C06	HN01	180.0	179.8
N03	C12	C06	N01	359.7	0.0
C04	C05	C06	N01	0.0	359.9
N01	C06	C05	C10	180.5	179.7
C05	C06	N01	C12	179.9	180.0
N01	C06	C12	O18	179.7	180.0
C04	N02	N01	C06	359.9	0.0
C04	N02	N01	HN01	179.9	179.8
C05	C04	N02	C07	180.1	180.3
N02	C04	C05	C06	359.9	0.1
N02	C04	C05	C10	179.5	180.2
N02	C04	C07	C08	190.7	196.9
N02	C04	C07	H07	310.7	316.7
N02	C04	C07	H07A	70.7	77.3
N01	C06	C12	N03	359.7	0.0
C13	N03	C12	HN03	180.0	180.0
C12	N03	C13	H13	180.0	300.0
C12	N03	C13	H13A	300.0	60.0
C12	N03	C13	H13B	60.0	180.0
C05	C06	C12	N03	179.8	180.0
C06	C12	N03	O18	180.0	180.0
C13	N03	C12	C06	180.1	180.0
C13	N03	C12	O18	0.1	360.0
C12	N03	C13	HN03	180.0	180.0
H13	C13	N03	H13A	240.0	240.0
H13	C13	N03	H13B	120.0	120.0
H13A	C13	N03	H13B	240.0	240.0
N01	C06	C05	C04	0.0	359.9
N02	C04	C05	C07	179.9	179.7
C05	C04	C07	C08	10.6	16.6
C05	C04	C07	H07	130.5	136.3
C05	C04	C07	H07A	250.5	257.0
C06	C05	C04	C10	180.4	179.9
C04	C05	C06	C12	180.0	179.9
C04	C05	C10	C09	21.5	16.2
C04	C05	C10	H10	141.6	135.8
C04	C05	C10	H10A	261.6	256.5
N02	C04	C07	C05	180.2	180.3
C07	C04	C05	C06	180.0	180.4
C07	C04	C05	C10	359.6	0.5
C04	C07	C08	C09	318.3	309.3
C08	C07	C04	H07	240.0	240.3
C08	C07	C04	H07A	120.0	119.6
C04	C07	C08	H08	78.3	69.4
C04	C07	C08	H08A	198.3	189.1
H07	C07	C04	H07A	240.0	239.4
N01	C06	C05	C12	180.1	180.0
C05	C06	N01	HN01	180.1	180.3
N03	C12	C06	C05	179.8	180.0
C06	C05	C04	C07	180.0	180.4
C04	C05	C06	C10	179.5	180.1
C06	C05	C10	C09	201.0	196.3
C06	C05	C10	H10	321.1	315.9
C06	C05	C10	H10A	81.0	76.7
C05	C06	C12	O18	359.8	360.0
C10	C05	C04	C07	359.6	0.5
C04	C05	C10	C06	180.5	179.8
C10	C05	C06	C12	0.4	359.8
C08	C09	C10	C05	309.0	310.0
C05	C10	C09	C11	180.9	189.9
C05	C10	C09	H09	66.8	70.0
C09	C10	C05	H10	240.0	240.4
C09	C10	C05	H10A	120.0	119.6
H10	C10	C05	H10A	240.0	239.2
N01	C06	C12	C05	179.9	180.0
C12	C06	N01	HN01	0.1	0.3
C06	C12	N03	C13	180.1	180.0
N03	C12	C06	O18	180.0	180.0
C06	C12	N03	HN03	0.2	0.0
C12	C06	C05	C10	0.4	359.8
C04	C07	C08	H07	120.0	119.7
C04	C07	C08	H07A	240.0	240.4
C07	C08	C09	C10	63.1	71.4
C07	C08	C09	C11	190.6	191.5
C09	C08	C07	H08	240.0	239.9
C09	C08	C07	H08A	120.0	120.2
C07	C08	C09	H09	304.5	311.4
H07	C07	C08	H07A	120.0	120.7
H08	C08	C07	H08A	240.0	240.3
C05	C10	C09	C08	309.0	310.0
C09	C08	C07	H07	198.3	189.6
C09	C08	C07	H07A	78.3	69.0
C07	C08	C09	H08	120.0	120.1
C07	C08	C09	H08A	240.0	239.8
C10	C09	C08	C11	232.6	239.9
C10	C09	C08	H09	118.6	120.0
C08	C09	C10	H10	189.0	190.4
C08	C09	C10	H10A	69.1	69.7
C08	C09	C11	C14	303.7	180.0
C08	C09	C11	C15	183.8	300.0
C08	C09	C11	C16	66.2	60.0
C11	C09	C08	H09	246.1	240.1
H08	C08	C09	H08A	120.0	119.7
C05	C10	C09	H10	120.0	119.6
C05	C10	C09	H10A	240.0	240.3
C08	C09	C10	C11	128.1	120.1
C10	C09	C08	H08	303.1	311.3
C10	C09	C08	H08A	183.1	191.6
C08	C09	C10	H09	242.2	240.0
C10	C09	C11	C14	68.7	300.2
C10	C09	C11	C15	308.8	60.2
C10	C09	C11	C16	191.2	180.2
C11	C09	C10	H09	114.1	119.9
H10	C10	C09	H10A	120.0	120.7
C08	C09	C11	C10	235.0	239.8
C11	C09	C08	H08	70.6	71.4
C11	C09	C08	H08A	310.6	311.7
C08	C09	C11	H09	117.0	119.9
C10	C09	C11	H09	242.0	240.1
C11	C09	C10	H10	60.9	70.3
C11	C09	C10	H10A	300.9	309.6
C14	C11	C09	C15	119.9	240.0
C14	C11	C09	C16	237.5	120.0
C09	C11	C14	H14	180.0	60.0
C09	C11	C14	H14A	300.0	180.0
C09	C11	C14	H14B	60.0	300.0
C15	C11	C09	C16	117.6	240.0
C09	C11	C15	H15	180.0	60.0
C09	C11	C15	H15A	300.0	180.0
C09	C11	C15	H15B	60.0	300.0
C09	C11	C16	C17	179.1	180.0
C09	C11	C16	H16	299.1	300.0
C09	C11	C16	H16A	59.1	60.0
C09	C11	C14	C15	237.9	120.0
C09	C11	C14	C16	120.1	240.0
C14	C11	C09	H09	186.7	60.1
C15	C11	C14	C16	242.2	120.0
C14	C11	C15	H15	57.3	180.0
C14	C11	C15	H15A	177.3	300.0
C14	C11	C15	H15B	297.3	60.0
C14	C11	C16	C17	302.0	60.0
C14	C11	C16	H16	62.0	180.0
C14	C11	C16	H16A	182.0	300.0
H14	C14	C11	H14A	240.0	240.0
H14	C14	C11	H14B	120.0	120.0
H14A	C14	C11	H14B	240.0	240.0
C09	C11	C15	C14	122.7	240.0
C09	C11	C15	C16	242.8	120.0
C15	C11	C09	H09	66.8	180.1
C14	C11	C15	C16	120.1	240.0
C15	C11	C14	H14	302.2	300.0
C15	C11	C14	H14A	62.1	60.0
C15	C11	C14	H14B	182.2	180.0
C15	C11	C16	C17	59.4	300.0
C15	C11	C16	H16	179.4	60.0
C15	C11	C16	H16A	299.4	180.0
H15	C15	C11	H15A	240.0	240.0
H15	C15	C11	H15B	120.0	120.0
H15A	C15	C11	H15B	240.0	240.0
C09	C11	C16	C14	237.1	120.0
C09	C11	C16	C15	119.7	240.0
C16	C11	C09	H09	309.2	300.1
C14	C11	C16	C15	242.6	120.0
C16	C11	C14	H14	60.0	180.0
C16	C11	C14	H14A	179.9	300.0
C16	C11	C14	H14B	300.0	60.0
C16	C11	C15	H15	297.2	300.0
C16	C11	C15	H15A	57.2	60.0
C16	C11	C15	H15B	177.2	180.0
C17	C16	C11	H16	240.0	240.0
C17	C16	C11	H16A	120.0	120.0
C11	C16	C17	H17	180.0	300.0
C11	C16	C17	H17A	300.0	60.0
C11	C16	C17	H17B	60.0	180.0
H16	C16	C11	H16A	240.0	240.0
O18	C12	N03	C13	0.1	360.0
N03	C12	O18	C06	180.0	180.0
O18	C12	N03	HN03	180.1	180.0
C11	C16	C17	H16	120.0	120.0
C11	C16	C17	H16A	240.0	240.0
H16	C16	C17	H16A	120.0	120.0
H17	C17	C16	H17A	240.0	239.9
H17	C17	C16	H17B	120.0	120.0
H17A	C17	C16	H17B	240.0	240.0
N02	N01	HN01	C06	180.0	180.3
HN01	N01	N02	C04	179.9	179.8
HN01	N01	C06	C05	180.1	180.3
HN01	N01	C06	C12	0.1	0.3
C12	N03	HN03	C13	180.0	180.0
HN03	N03	C12	C06	0.2	0.0
HN03	N03	C12	O18	180.1	180.0
HN03	N03	C13	H13	360.0	120.0
HN03	N03	C13	H13A	120.0	240.0
HN03	N03	C13	H13B	240.0	360.0
C04	C07	H07	C08	238.4	241.2
C04	C07	H07	H07A	119.2	120.6
H07	C07	C08	C09	198.3	189.6
C08	C07	H07	H07A	240.8	239.4
H07	C07	C08	H08	318.3	309.7
H07	C07	C08	H08A	78.3	69.4
C04	C07	H07A	C08	121.6	118.7
C04	C07	H07A	H07	240.8	239.4
H07A	C07	C08	C09	78.3	69.0
C08	C07	H07A	H07	119.2	120.7
H07A	C07	C08	H08	198.3	189.0
H07A	C07	C08	H08A	318.3	308.8
C07	C08	H08	C09	238.0	239.6
H08	C08	C07	H07	318.3	309.7
H08	C08	C07	H07A	198.3	189.0
C07	C08	H08	H08A	119.0	119.8
H08	C08	C09	C10	303.1	311.3
H08	C08	C09	C11	70.6	71.4
C09	C08	H08	H08A	241.0	240.2
H08	C08	C09	H09	184.5	191.3
C07	C08	H08A	C09	122.0	120.5
H08A	C08	C07	H07	78.3	69.4
H08A	C08	C07	H07A	318.3	308.8
C07	C08	H08A	H08	241.0	240.2
H08A	C08	C09	C10	183.1	191.6
H08A	C08	C09	C11	310.6	311.7
C09	C08	H08A	H08	119.0	119.7
H08A	C08	C09	H09	64.5	71.6
C08	C09	H09	C10	118.0	120.2
C08	C09	H09	C11	238.6	240.1
H09	C09	C08	H08	184.5	191.3
H09	C09	C08	H08A	64.5	71.6
C10	C09	H09	C11	120.6	119.9
H09	C09	C10	H10	306.8	310.4
H09	C09	C10	H10A	186.8	189.7
H09	C09	C11	C14	186.7	60.1
H09	C09	C11	C15	66.8	180.1
H09	C09	C11	C16	309.2	300.1
C05	C10	H10	C09	238.3	241.4
C05	C10	H10	H10A	119.2	120.7
H10	C10	C09	C11	60.9	70.3
H10	C10	C09	H09	306.8	310.4
C09	C10	H10	H10A	240.9	239.4
C05	C10	H10A	C09	121.7	118.6
C05	C10	H10A	H10	240.8	239.3
H10A	C10	C09	C11	300.9	309.6
H10A	C10	C09	H09	186.8	189.7
C09	C10	H10A	H10	119.2	120.6
H13	C13	N03	HN03	360.0	120.0
N03	C13	H13	H13A	120.0	120.0
N03	C13	H13	H13B	240.0	240.0
H13A	C13	H13	H13B	120.0	119.9
H13A	C13	N03	HN03	120.0	240.0
N03	C13	H13A	H13	240.0	240.0
N03	C13	H13A	H13B	120.0	120.0
H13	C13	H13A	H13B	240.0	240.0
H13B	C13	N03	HN03	240.0	360.0
N03	C13	H13B	H13	120.0	120.0
N03	C13	H13B	H13A	240.0	240.0
H13	C13	H13B	H13A	120.0	120.0
H14	C14	C11	C15	302.2	300.0
H14	C14	C11	C16	60.0	180.0
C11	C14	H14	H14A	120.0	120.0
C11	C14	H14	H14B	240.0	240.0
H14A	C14	H14	H14B	120.0	120.0
H14A	C14	C11	C15	62.1	60.0
H14A	C14	C11	C16	179.9	300.0
C11	C14	H14A	H14	240.0	240.0
C11	C14	H14A	H14B	120.0	120.0
H14	C14	H14A	H14B	240.0	240.0
H14B	C14	C11	C15	182.2	180.0
H14B	C14	C11	C16	300.0	60.0
C11	C14	H14B	H14	120.0	120.0
C11	C14	H14B	H14A	240.0	240.0
H14	C14	H14B	H14A	120.0	120.0
H15	C15	C11	C16	297.2	300.0
C11	C15	H15	H15A	120.0	120.0
C11	C15	H15	H15B	240.0	240.0
H15A	C15	H15	H15B	120.0	120.1
H15A	C15	C11	C16	57.2	60.0
C11	C15	H15A	H15	239.9	240.0
C11	C15	H15A	H15B	120.0	119.9
H15	C15	H15A	H15B	240.0	239.9
H15B	C15	C11	C16	177.2	180.0
C11	C15	H15B	H15	120.0	120.0
C11	C15	H15B	H15A	240.0	240.1
H15	C15	H15B	H15A	120.0	120.1
C11	C16	H16	C17	232.4	240.0
C11	C16	H16	H16A	116.2	120.0
C17	C16	H16	H16A	243.8	240.0
H16	C16	C17	H17	60.0	180.0
H16	C16	C17	H17A	180.0	300.0
H16	C16	C17	H17B	300.0	60.0
C11	C16	H16A	C17	127.6	120.0
C11	C16	H16A	H16	243.8	240.0
C17	C16	H16A	H16	116.2	120.0
H16A	C16	C17	H17	300.0	60.0
H16A	C16	C17	H17A	60.0	180.0
H16A	C16	C17	H17B	180.0	300.0
H17	C17	C16	H16	60.0	180.0
H17	C17	C16	H16A	300.0	60.0
C16	C17	H17	H17A	120.0	120.1
C16	C17	H17	H17B	240.0	240.0
H17A	C17	H17	H17B	120.0	119.9
H17A	C17	C16	H16	180.0	300.0
H17A	C17	C16	H16A	60.0	180.0
C16	C17	H17A	H17	240.0	239.9
C16	C17	H17A	H17B	120.0	120.0
H17	C17	H17A	H17B	240.0	240.1
H17B	C17	C16	H16	300.0	60.0
H17B	C17	C16	H16A	180.0	300.0
C16	C17	H17B	H17	120.0	120.0
C16	C17	H17B	H17A	240.0	240.0
H17	C17	H17B	H17A	120.0	120.0