PDB Chemical Component X0A
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for X0A
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N01 |
C12 |
1.353 |
1.331 |
| N01 |
C13 |
1.342 |
1.329 |
| C13 |
N02 |
1.344 |
1.328 |
| N02 |
C14 |
1.349 |
1.330 |
| C12 |
N03 |
1.357 |
1.330 |
| N03 |
C14 |
1.363 |
1.330 |
| N04 |
C13 |
1.263 |
1.381 |
| N04 |
HN04 |
1.000 |
0.970 |
| N04 |
HN0A |
1.000 |
0.970 |
| C14 |
N05 |
1.306 |
1.381 |
| N05 |
C15 |
1.302 |
1.398 |
| N05 |
HN05 |
1.000 |
0.969 |
| C07 |
C06 |
1.418 |
1.385 |
| C06 |
CL22 |
1.719 |
1.735 |
| C06 |
C11 |
1.420 |
1.380 |
| C08 |
C07 |
1.422 |
1.381 |
| C07 |
H07 |
1.080 |
1.080 |
| C08 |
C09 |
1.426 |
1.386 |
| C08 |
H08 |
1.080 |
1.080 |
| O21 |
C09 |
1.361 |
1.358 |
| C09 |
C10 |
1.452 |
1.399 |
| C10 |
C11 |
1.432 |
1.394 |
| C10 |
C12 |
1.385 |
1.481 |
| C11 |
H11 |
1.080 |
1.080 |
| C16 |
C15 |
1.436 |
1.389 |
| C15 |
C20 |
1.421 |
1.389 |
| C16 |
C17 |
1.423 |
1.382 |
| C16 |
H16 |
1.080 |
1.080 |
| C17 |
C18 |
1.419 |
1.383 |
| C17 |
H17 |
1.080 |
1.080 |
| C18 |
C19 |
1.420 |
1.384 |
| C18 |
H18 |
1.080 |
1.079 |
| C20 |
C19 |
1.419 |
1.381 |
| C19 |
H19 |
1.080 |
1.080 |
| C20 |
H20 |
1.080 |
1.080 |
| O21 |
HO21 |
0.950 |
0.967 |
Bond Angles for X0A
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C12 |
N01 |
C13 |
114.8 |
120.0 |
| N01 |
C12 |
N03 |
124.7 |
119.9 |
| N01 |
C12 |
C10 |
117.5 |
120.0 |
| N01 |
C13 |
N02 |
126.3 |
120.0 |
| N01 |
C13 |
N04 |
116.4 |
120.0 |
| C13 |
N02 |
C14 |
114.3 |
120.1 |
| N02 |
C14 |
N03 |
125.2 |
120.0 |
| N02 |
C14 |
N05 |
114.9 |
120.0 |
| C12 |
N03 |
C14 |
114.7 |
120.0 |
| N03 |
C14 |
N05 |
119.9 |
120.0 |
| C13 |
N04 |
HN04 |
109.5 |
120.0 |
| C13 |
N04 |
HN0A |
109.5 |
120.0 |
| HN04 |
N04 |
HN0A |
109.5 |
120.0 |
| C14 |
N05 |
C15 |
128.0 |
120.0 |
| C14 |
N05 |
HN05 |
116.0 |
120.0 |
| C15 |
N05 |
HN05 |
116.0 |
120.0 |
| N05 |
C15 |
C20 |
118.4 |
120.1 |
| C07 |
C06 |
CL22 |
119.7 |
119.9 |
| C07 |
C06 |
C11 |
120.4 |
120.2 |
| C11 |
C06 |
CL22 |
119.9 |
119.9 |
| C06 |
C11 |
C10 |
120.6 |
119.9 |
| C06 |
C11 |
H11 |
119.7 |
120.0 |
| C08 |
C07 |
H07 |
120.0 |
119.8 |
| C09 |
C08 |
H08 |
119.8 |
120.0 |
| C08 |
C09 |
C10 |
119.9 |
119.7 |
| C09 |
C10 |
C11 |
118.6 |
119.7 |
| C09 |
C10 |
C12 |
121.7 |
120.2 |
| C11 |
C10 |
C12 |
119.6 |
120.1 |
| C10 |
C11 |
H11 |
119.7 |
120.0 |
| C16 |
C15 |
C20 |
119.0 |
119.9 |
| C15 |
C20 |
C19 |
120.5 |
119.9 |
| C15 |
C20 |
H20 |
119.7 |
120.0 |
| C17 |
C16 |
H16 |
119.8 |
120.1 |
| C16 |
C17 |
C18 |
119.9 |
120.1 |
| C16 |
C17 |
H17 |
120.0 |
119.9 |
| C18 |
C17 |
H17 |
120.0 |
120.0 |
| C17 |
C18 |
C19 |
120.0 |
120.1 |
| C17 |
C18 |
H18 |
120.0 |
119.9 |
| C19 |
C18 |
H18 |
120.0 |
119.9 |
| C18 |
C19 |
H19 |
119.9 |
120.0 |
| C20 |
C19 |
H19 |
119.9 |
119.9 |
Torsion Angles for X0A
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C12 |
N01 |
C13 |
N02 |
359.9 |
360.0 |
| C12 |
N01 |
C13 |
N04 |
180.1 |
180.0 |
| N01 |
C12 |
N03 |
C14 |
359.9 |
0.0 |
| C09 |
C10 |
C12 |
N01 |
4.3 |
360.0 |
| C11 |
C10 |
C12 |
N01 |
185.0 |
180.3 |
| C13 |
N01 |
C12 |
N03 |
0.2 |
360.0 |
| C13 |
N01 |
C12 |
C10 |
179.2 |
180.0 |
| N01 |
C13 |
N02 |
C14 |
0.1 |
0.1 |
| N01 |
C13 |
N04 |
HN04 |
360.0 |
360.0 |
| N01 |
C13 |
N04 |
HN0A |
120.0 |
180.0 |
| N01 |
C13 |
N02 |
N04 |
180.2 |
180.0 |
| C13 |
N02 |
C14 |
N03 |
360.0 |
360.0 |
| C13 |
N02 |
C14 |
N05 |
179.7 |
180.0 |
| C12 |
N03 |
C14 |
N02 |
0.1 |
-0.0 |
| N03 |
C14 |
N02 |
N05 |
180.3 |
180.0 |
| N02 |
C14 |
N05 |
C15 |
173.7 |
5.5 |
| N02 |
C14 |
N05 |
HN05 |
353.7 |
185.5 |
| N03 |
C12 |
N01 |
C13 |
0.2 |
360.0 |
| N01 |
C12 |
N03 |
C10 |
179.0 |
180.0 |
| N02 |
C14 |
N03 |
C12 |
0.1 |
0.0 |
| C12 |
N03 |
C14 |
N05 |
180.4 |
180.0 |
| N02 |
C14 |
N03 |
N05 |
179.7 |
180.0 |
| N03 |
C14 |
N05 |
C15 |
353.4 |
185.5 |
| N03 |
C14 |
N05 |
HN05 |
173.4 |
5.5 |
| N01 |
C13 |
N04 |
N02 |
179.8 |
180.0 |
| N04 |
C13 |
N02 |
C14 |
179.8 |
180.1 |
| HN04 |
N04 |
C13 |
HN0A |
239.9 |
180.0 |
| C13 |
N04 |
HN04 |
HN0A |
120.0 |
180.0 |
| C13 |
N04 |
HN0A |
HN04 |
240.0 |
180.0 |
| N02 |
C14 |
N05 |
N03 |
180.3 |
180.0 |
| C15 |
N05 |
C14 |
HN05 |
180.0 |
179.9 |
| C14 |
N05 |
C15 |
C20 |
224.9 |
213.2 |
| C14 |
N05 |
C15 |
HN05 |
180.0 |
180.1 |
| C16 |
C15 |
N05 |
C20 |
180.8 |
180.3 |
| N05 |
C15 |
C20 |
C19 |
180.7 |
179.8 |
| N05 |
C15 |
C20 |
H20 |
0.7 |
0.0 |
| C14 |
N05 |
HN05 |
C15 |
180.0 |
179.9 |
| HN05 |
N05 |
C15 |
C20 |
44.9 |
33.1 |
| C11 |
C06 |
C07 |
CL22 |
180.1 |
180.2 |
| C07 |
C06 |
C11 |
C10 |
359.9 |
359.5 |
| C07 |
C06 |
C11 |
H11 |
179.9 |
179.7 |
| C07 |
C06 |
CL22 |
C11 |
180.1 |
180.2 |
| CL22 |
C06 |
C11 |
C10 |
180.0 |
179.7 |
| CL22 |
C06 |
C11 |
H11 |
0.0 |
359.9 |
| C07 |
C06 |
C11 |
CL22 |
179.9 |
179.8 |
| C09 |
C10 |
C11 |
C06 |
0.0 |
0.5 |
| C06 |
C11 |
C10 |
C12 |
179.3 |
180.3 |
| C10 |
C11 |
C06 |
H11 |
180.0 |
179.7 |
| C08 |
C07 |
C06 |
CL22 |
180.0 |
180.1 |
| C08 |
C07 |
C06 |
C11 |
0.1 |
0.3 |
| H07 |
C07 |
C06 |
CL22 |
360.0 |
0.0 |
| H07 |
C07 |
C06 |
C11 |
180.1 |
180.3 |
| C09 |
C08 |
C07 |
H07 |
180.0 |
180.0 |
| C08 |
C09 |
C10 |
C11 |
0.0 |
359.7 |
| C08 |
C09 |
C10 |
C12 |
180.8 |
180.0 |
| H08 |
C08 |
C07 |
H07 |
360.0 |
0.0 |
| H08 |
C08 |
C09 |
C10 |
180.0 |
180.0 |
| O21 |
C09 |
C08 |
H08 |
0.2 |
360.0 |
| N01 |
C12 |
C10 |
C09 |
4.3 |
360.0 |
| C06 |
C11 |
C10 |
C09 |
0.0 |
0.5 |
| C10 |
C09 |
C08 |
H08 |
180.0 |
180.0 |
| C11 |
C10 |
C09 |
C12 |
179.2 |
179.7 |
| C09 |
C10 |
C11 |
H11 |
180.0 |
180.3 |
| N01 |
C12 |
C10 |
C11 |
185.0 |
180.3 |
| C10 |
C11 |
C06 |
CL22 |
180.0 |
179.7 |
| C06 |
C11 |
C10 |
H11 |
180.0 |
180.3 |
| C09 |
C10 |
C11 |
C12 |
180.7 |
180.3 |
| C10 |
C12 |
N01 |
C13 |
179.2 |
180.0 |
| N01 |
C12 |
C10 |
N03 |
180.9 |
180.0 |
| C10 |
C12 |
N03 |
C14 |
180.8 |
180.0 |
| C09 |
C10 |
C12 |
C11 |
179.2 |
179.7 |
| C12 |
C10 |
C11 |
H11 |
359.3 |
360.0 |
| H11 |
C11 |
C06 |
CL22 |
0.0 |
359.9 |
| C06 |
C11 |
H11 |
C10 |
180.0 |
179.7 |
| H11 |
C11 |
C10 |
C12 |
359.3 |
360.0 |
| C16 |
C15 |
N05 |
HN05 |
225.7 |
213.5 |
| N05 |
C15 |
C16 |
C20 |
179.2 |
179.7 |
| C16 |
C15 |
C20 |
C19 |
359.9 |
359.4 |
| C16 |
C15 |
C20 |
H20 |
179.9 |
179.7 |
| C20 |
C15 |
N05 |
HN05 |
44.9 |
33.1 |
| C15 |
C20 |
C19 |
H19 |
179.9 |
180.3 |
| C17 |
C16 |
C15 |
C20 |
0.2 |
0.3 |
| C18 |
C17 |
C16 |
H17 |
180.0 |
180.0 |
| C16 |
C17 |
C18 |
C19 |
0.1 |
360.0 |
| C16 |
C17 |
C18 |
H18 |
180.1 |
180.0 |
| H16 |
C16 |
C15 |
C20 |
180.2 |
180.2 |
| H16 |
C16 |
C17 |
C18 |
179.7 |
180.1 |
| H16 |
C16 |
C17 |
H17 |
359.7 |
0.1 |
| C18 |
C17 |
C16 |
H16 |
179.7 |
180.1 |
| C16 |
C17 |
C18 |
H17 |
180.0 |
180.0 |
| C19 |
C18 |
C17 |
H18 |
180.0 |
180.0 |
| C17 |
C18 |
C19 |
H19 |
180.1 |
180.0 |
| H17 |
C17 |
C16 |
H16 |
359.7 |
0.1 |
| C16 |
C17 |
H17 |
C18 |
180.0 |
180.0 |
| H17 |
C17 |
C18 |
C19 |
180.1 |
180.0 |
| H17 |
C17 |
C18 |
H18 |
0.1 |
0.0 |
| C15 |
C20 |
C19 |
C18 |
359.9 |
0.5 |
| C19 |
C18 |
C17 |
H17 |
180.1 |
180.0 |
| C17 |
C18 |
C19 |
H18 |
180.0 |
180.0 |
| C20 |
C19 |
C18 |
H19 |
180.0 |
179.8 |
| H18 |
C18 |
C17 |
H17 |
0.1 |
0.0 |
| C17 |
C18 |
H18 |
C19 |
180.0 |
180.0 |
| H18 |
C18 |
C19 |
H19 |
0.1 |
360.0 |
| C15 |
C20 |
C19 |
H20 |
180.0 |
180.3 |
| C20 |
C19 |
C18 |
H18 |
180.1 |
179.7 |
| C18 |
C19 |
C20 |
H19 |
180.0 |
180.2 |
| H19 |
C19 |
C18 |
H18 |
0.1 |
360.0 |
| C15 |
C20 |
H20 |
C19 |
180.0 |
179.7 |
| H20 |
C20 |
C19 |
H19 |
359.9 |
0.0 |