PDB Chemical Component X01
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for X01
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C13 |
N01 |
1.362 |
1.332 |
| N01 |
C15 |
1.356 |
1.322 |
| N02 |
C13 |
1.356 |
1.330 |
| N02 |
C14 |
1.346 |
1.329 |
| C14 |
N03 |
1.351 |
1.331 |
| N03 |
C15 |
1.350 |
1.321 |
| N04 |
C14 |
1.269 |
1.379 |
| N04 |
HN04 |
1.000 |
0.970 |
| N04 |
HN0A |
1.000 |
0.970 |
| C16 |
N05 |
1.162 |
1.136 |
| C07 |
C06 |
1.423 |
1.398 |
| C06 |
C16 |
1.321 |
1.433 |
| C06 |
C12 |
1.423 |
1.395 |
| C09 |
C07 |
1.419 |
1.377 |
| C07 |
H07 |
1.080 |
1.079 |
| C09 |
C10 |
1.422 |
1.388 |
| C09 |
H09 |
1.080 |
1.080 |
| O17 |
C10 |
1.365 |
1.356 |
| C10 |
C11 |
1.450 |
1.402 |
| C11 |
C12 |
1.438 |
1.391 |
| C11 |
C13 |
1.380 |
1.481 |
| C12 |
H12 |
1.080 |
1.080 |
| C15 |
H15 |
1.080 |
1.080 |
| O17 |
HO17 |
0.950 |
0.966 |
Bond Angles for X01
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C13 |
N01 |
C15 |
114.4 |
120.0 |
| N01 |
C15 |
N03 |
125.9 |
120.2 |
| N01 |
C15 |
H15 |
117.1 |
119.9 |
| C13 |
N02 |
C14 |
114.7 |
119.8 |
| N02 |
C13 |
C11 |
117.7 |
120.0 |
| N02 |
C14 |
N03 |
126.2 |
119.9 |
| N02 |
C14 |
N04 |
116.8 |
120.0 |
| C14 |
N03 |
C15 |
114.0 |
120.1 |
| N03 |
C15 |
H15 |
117.0 |
119.9 |
| C14 |
N04 |
HN04 |
109.5 |
120.1 |
| C14 |
N04 |
HN0A |
109.5 |
120.0 |
| HN04 |
N04 |
HN0A |
109.5 |
120.0 |
| C07 |
C06 |
C16 |
119.6 |
120.0 |
| C07 |
C06 |
C12 |
120.1 |
120.0 |
| C12 |
C06 |
C16 |
120.3 |
120.0 |
| C06 |
C12 |
C11 |
120.5 |
119.7 |
| C06 |
C12 |
H12 |
119.8 |
120.1 |
| C09 |
C07 |
H07 |
119.9 |
119.9 |
| C10 |
C09 |
H09 |
119.8 |
119.9 |
| C09 |
C10 |
C11 |
120.0 |
120.0 |
| C10 |
C11 |
C12 |
118.7 |
119.8 |
| C10 |
C11 |
C13 |
121.2 |
120.1 |
| C12 |
C11 |
C13 |
120.1 |
120.1 |
| C11 |
C12 |
H12 |
119.7 |
120.1 |
Torsion Angles for X01
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C13 |
N01 |
C15 |
N03 |
0.1 |
360.0 |
| C13 |
N01 |
C15 |
H15 |
180.1 |
180.0 |
| C14 |
N03 |
C15 |
N01 |
359.8 |
0.0 |
| N03 |
C15 |
N01 |
H15 |
180.0 |
180.0 |
| N02 |
C13 |
N01 |
C15 |
360.0 |
360.0 |
| C13 |
N02 |
C14 |
N03 |
359.9 |
0.0 |
| C13 |
N02 |
C14 |
N04 |
180.1 |
180.0 |
| C10 |
C11 |
C13 |
N02 |
358.5 |
180.0 |
| C12 |
C11 |
C13 |
N02 |
179.2 |
0.2 |
| C14 |
N02 |
C13 |
C11 |
179.2 |
180.1 |
| N02 |
C14 |
N03 |
C15 |
0.1 |
360.0 |
| N02 |
C14 |
N04 |
HN04 |
0.0 |
0.0 |
| N02 |
C14 |
N04 |
HN0A |
120.0 |
180.0 |
| N01 |
C15 |
N03 |
C14 |
359.8 |
0.0 |
| N02 |
C14 |
N03 |
N04 |
180.1 |
180.0 |
| C14 |
N03 |
C15 |
H15 |
179.8 |
180.0 |
| N01 |
C15 |
N03 |
H15 |
180.0 |
180.0 |
| N02 |
C14 |
N04 |
N03 |
179.9 |
180.0 |
| N04 |
C14 |
N03 |
C15 |
180.0 |
180.0 |
| HN04 |
N04 |
C14 |
HN0A |
240.0 |
180.0 |
| C14 |
N04 |
HN04 |
HN0A |
120.0 |
180.0 |
| C14 |
N04 |
HN0A |
HN04 |
240.0 |
180.0 |
| C12 |
C06 |
C07 |
C16 |
180.4 |
180.3 |
| C07 |
C06 |
C12 |
C11 |
360.0 |
359.4 |
| C07 |
C06 |
C12 |
H12 |
180.0 |
179.7 |
| C07 |
C06 |
C16 |
C12 |
180.4 |
180.3 |
| C16 |
C06 |
C12 |
C11 |
180.4 |
179.8 |
| C16 |
C06 |
C12 |
H12 |
0.4 |
360.0 |
| C07 |
C06 |
C12 |
C16 |
179.6 |
179.7 |
| C10 |
C11 |
C12 |
C06 |
0.0 |
0.5 |
| C06 |
C12 |
C11 |
C13 |
179.3 |
180.3 |
| C11 |
C12 |
C06 |
H12 |
180.0 |
179.8 |
| C09 |
C07 |
C06 |
C16 |
179.6 |
180.0 |
| C09 |
C07 |
C06 |
C12 |
0.1 |
0.3 |
| H07 |
C07 |
C06 |
C16 |
359.7 |
359.9 |
| H07 |
C07 |
C06 |
C12 |
180.1 |
180.3 |
| C10 |
C09 |
C07 |
H07 |
179.9 |
180.0 |
| C09 |
C10 |
C11 |
C12 |
360.0 |
359.8 |
| C09 |
C10 |
C11 |
C13 |
180.7 |
180.0 |
| H09 |
C09 |
C07 |
H07 |
359.9 |
360.0 |
| H09 |
C09 |
C10 |
C11 |
180.0 |
180.0 |
| O17 |
C10 |
C09 |
H09 |
0.3 |
0.1 |
| N02 |
C13 |
C11 |
C10 |
358.5 |
180.0 |
| C06 |
C12 |
C11 |
C10 |
0.0 |
0.5 |
| C11 |
C10 |
C09 |
H09 |
180.0 |
180.0 |
| C12 |
C11 |
C10 |
C13 |
179.3 |
179.8 |
| C10 |
C11 |
C12 |
H12 |
180.0 |
180.3 |
| N02 |
C13 |
C11 |
C12 |
179.2 |
0.2 |
| C11 |
C12 |
C06 |
C16 |
180.4 |
179.8 |
| C06 |
C12 |
C11 |
H12 |
180.0 |
180.2 |
| C10 |
C11 |
C12 |
C13 |
180.7 |
180.2 |
| C11 |
C13 |
N01 |
C15 |
180.8 |
179.9 |
| C11 |
C13 |
N02 |
C14 |
179.2 |
180.1 |
| C10 |
C11 |
C13 |
C12 |
179.3 |
179.8 |
| C13 |
C11 |
C12 |
H12 |
359.3 |
0.1 |
| H12 |
C12 |
C06 |
C16 |
0.4 |
360.0 |
| C06 |
C12 |
H12 |
C11 |
180.0 |
179.8 |
| H12 |
C12 |
C11 |
C13 |
359.3 |
0.1 |
| N01 |
C15 |
H15 |
N03 |
180.0 |
180.0 |