PDB Chemical Component WSM
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for WSM
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C3 |
N2 |
1.486 |
1.465 |
| C3 |
C2 |
1.516 |
1.530 |
| O2 |
C11 |
1.214 |
1.212 |
| N2 |
C4 |
1.423 |
1.402 |
| N2 |
C11 |
1.367 |
1.351 |
| C5 |
C6 |
1.392 |
1.382 |
| C5 |
C4 |
1.399 |
1.385 |
| C2 |
C1 |
1.521 |
1.531 |
| C1 |
N1 |
1.465 |
1.469 |
| C6 |
C7 |
1.387 |
1.382 |
| C4 |
C9 |
1.398 |
1.394 |
| C11 |
C10 |
1.501 |
1.510 |
| C7 |
C8 |
1.379 |
1.383 |
| C9 |
C8 |
1.388 |
1.384 |
| C9 |
O1 |
1.366 |
1.360 |
| C10 |
O1 |
1.419 |
1.430 |
| N1 |
H1 |
1.000 |
1.009 |
| N1 |
H2 |
1.000 |
1.009 |
| C5 |
H4 |
1.080 |
1.080 |
| C6 |
H5 |
1.080 |
1.080 |
| C7 |
H6 |
1.080 |
1.080 |
| C8 |
H7 |
1.080 |
1.080 |
| C10 |
H8 |
1.100 |
1.090 |
| C10 |
H9 |
1.100 |
1.089 |
| C1 |
H10 |
1.100 |
1.090 |
| C1 |
H11 |
1.100 |
1.089 |
| C2 |
H12 |
1.100 |
1.090 |
| C2 |
H13 |
1.100 |
1.090 |
| C3 |
H14 |
1.100 |
1.091 |
| C3 |
H15 |
1.100 |
1.089 |
Bond Angles for WSM
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C3 |
N2 |
C11 |
118.1 |
120.5 |
| N2 |
C3 |
H14 |
108.7 |
109.4 |
| N2 |
C3 |
H15 |
108.7 |
109.5 |
| C3 |
C2 |
H12 |
108.4 |
109.5 |
| C3 |
C2 |
H13 |
108.4 |
109.5 |
| N2 |
C4 |
C9 |
119.4 |
119.3 |
| C5 |
C6 |
C7 |
120.2 |
120.2 |
| C6 |
C5 |
H4 |
119.8 |
120.1 |
| C5 |
C6 |
H5 |
119.9 |
119.9 |
| C5 |
C4 |
C9 |
118.0 |
120.0 |
| C2 |
C1 |
H10 |
108.5 |
109.5 |
| C2 |
C1 |
H11 |
108.5 |
109.4 |
| C1 |
N1 |
H1 |
109.5 |
111.0 |
| C1 |
N1 |
H2 |
109.4 |
111.0 |
| C6 |
C7 |
C8 |
120.2 |
120.3 |
| C7 |
C6 |
H5 |
119.9 |
119.9 |
| C6 |
C7 |
H6 |
119.9 |
119.9 |
| C4 |
C9 |
C8 |
121.5 |
119.8 |
| C4 |
C9 |
O1 |
121.9 |
119.5 |
| C11 |
C10 |
H8 |
107.4 |
109.3 |
| C11 |
C10 |
H9 |
107.4 |
109.8 |
| C8 |
C7 |
H6 |
119.9 |
119.8 |
| C7 |
C8 |
H7 |
120.3 |
120.1 |
| C9 |
C8 |
H7 |
120.3 |
120.0 |
| C10 |
O1 |
C9 |
118.6 |
116.7 |
| O1 |
C10 |
H8 |
107.4 |
109.4 |
| O1 |
C10 |
H9 |
107.4 |
109.5 |
| H1 |
N1 |
H2 |
109.5 |
111.0 |
| H8 |
C10 |
H9 |
109.5 |
109.4 |
| H10 |
C1 |
H11 |
109.4 |
109.5 |
| H12 |
C2 |
H13 |
109.5 |
109.5 |
| H14 |
C3 |
H15 |
109.5 |
109.5 |
Torsion Angles for WSM
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N2 |
C3 |
C2 |
H12 |
18.4 |
60.0 |
| N2 |
C3 |
C2 |
H13 |
137.1 |
300.0 |
| C3 |
N2 |
C4 |
C9 |
185.6 |
195.5 |
| H14 |
C3 |
N2 |
H15 |
240.9 |
120.0 |
| C3 |
C2 |
C1 |
H10 |
168.0 |
60.0 |
| C3 |
C2 |
C1 |
H11 |
286.8 |
300.0 |
| H12 |
C2 |
C3 |
H13 |
241.3 |
120.0 |
| O2 |
C11 |
C10 |
H8 |
281.2 |
28.7 |
| O2 |
C11 |
C10 |
H9 |
38.9 |
268.7 |
| C5 |
C4 |
N2 |
C9 |
178.1 |
179.7 |
| N2 |
C4 |
C9 |
C8 |
178.8 |
179.7 |
| N2 |
C4 |
C9 |
O1 |
358.5 |
359.6 |
| C11 |
N2 |
C3 |
H14 |
205.8 |
150.1 |
| C11 |
N2 |
C3 |
H15 |
324.9 |
30.0 |
| C11 |
N2 |
C4 |
C9 |
3.5 |
15.5 |
| N2 |
C11 |
C10 |
H8 |
99.5 |
208.3 |
| N2 |
C11 |
C10 |
H9 |
217.2 |
88.3 |
| C6 |
C5 |
C4 |
C9 |
1.9 |
0.0 |
| C5 |
C6 |
C7 |
C8 |
358.2 |
359.9 |
| C7 |
C6 |
C5 |
H5 |
180.0 |
180.1 |
| C5 |
C6 |
C7 |
H6 |
178.2 |
179.9 |
| N2 |
C4 |
C5 |
C9 |
181.9 |
180.3 |
| C5 |
C4 |
C9 |
C8 |
0.6 |
360.0 |
| C5 |
C4 |
C9 |
O1 |
180.3 |
179.9 |
| C2 |
C1 |
N1 |
H1 |
180.0 |
180.0 |
| C2 |
C1 |
N1 |
H2 |
300.0 |
303.9 |
| H10 |
C1 |
C2 |
H11 |
241.2 |
120.0 |
| H1 |
N1 |
C1 |
H2 |
240.0 |
236.1 |
| C7 |
C6 |
C5 |
H4 |
178.7 |
180.0 |
| C5 |
C6 |
C7 |
H5 |
180.0 |
179.9 |
| C8 |
C7 |
C6 |
H6 |
180.0 |
180.0 |
| C6 |
C7 |
C8 |
H7 |
184.2 |
180.0 |
| C4 |
C9 |
C8 |
H7 |
176.4 |
180.1 |
| C10 |
O1 |
C9 |
C4 |
347.3 |
327.3 |
| O1 |
C10 |
C11 |
H8 |
238.8 |
119.8 |
| O1 |
C10 |
C11 |
H9 |
121.2 |
239.8 |
| H8 |
C10 |
C11 |
H9 |
242.3 |
120.0 |
| C8 |
C7 |
C6 |
H5 |
178.2 |
180.0 |
| C6 |
C7 |
C8 |
H6 |
180.0 |
180.0 |
| C4 |
C9 |
C8 |
C7 |
356.4 |
360.0 |
| C9 |
C8 |
C7 |
H7 |
180.0 |
180.1 |
| C4 |
C9 |
C8 |
O1 |
179.8 |
179.9 |
| C9 |
C8 |
C7 |
H6 |
184.2 |
180.1 |
| C7 |
C8 |
C9 |
H7 |
180.0 |
179.9 |
| C4 |
C9 |
O1 |
C8 |
180.2 |
180.1 |
| O1 |
C9 |
C8 |
H7 |
356.6 |
0.2 |
| C9 |
O1 |
C10 |
H8 |
262.8 |
166.4 |
| C9 |
O1 |
C10 |
H9 |
145.2 |
286.3 |
| C4 |
C9 |
O1 |
C10 |
347.3 |
327.3 |
| C11 |
C10 |
O1 |
H8 |
121.1 |
240.3 |
| C11 |
C10 |
O1 |
H9 |
238.8 |
120.4 |
| H8 |
C10 |
O1 |
H9 |
117.7 |
240.1 |
| C1 |
N1 |
H1 |
H2 |
120.0 |
123.9 |
| C1 |
N1 |
H2 |
H1 |
240.0 |
236.1 |
| H4 |
C5 |
C6 |
C7 |
178.7 |
180.0 |
| H4 |
C5 |
C6 |
H5 |
358.7 |
360.0 |
| H4 |
C5 |
C4 |
C9 |
181.9 |
180.0 |
| C5 |
C6 |
H5 |
C7 |
180.0 |
180.1 |
| H5 |
C6 |
C5 |
H4 |
358.7 |
360.0 |
| H5 |
C6 |
C7 |
C8 |
178.2 |
180.0 |
| H5 |
C6 |
C7 |
H6 |
358.2 |
360.0 |
| C6 |
C7 |
H6 |
C8 |
180.0 |
180.0 |
| H6 |
C7 |
C6 |
H5 |
358.2 |
360.0 |
| H6 |
C7 |
C8 |
H7 |
4.2 |
360.0 |
| H7 |
C8 |
C7 |
H6 |
4.2 |
360.0 |
| C11 |
C10 |
H8 |
H9 |
116.3 |
239.8 |
| H8 |
C10 |
O1 |
C9 |
262.8 |
166.4 |
| O1 |
C10 |
H8 |
H9 |
243.6 |
119.9 |
| C11 |
C10 |
H9 |
H8 |
243.7 |
119.9 |
| H9 |
C10 |
O1 |
C9 |
145.2 |
286.3 |
| O1 |
C10 |
H9 |
H8 |
116.4 |
240.1 |
| C2 |
C1 |
H10 |
H11 |
118.2 |
240.0 |
| H10 |
C1 |
N1 |
H1 |
59.4 |
300.0 |
| H10 |
C1 |
N1 |
H2 |
179.4 |
63.9 |
| C2 |
C1 |
H11 |
H10 |
241.8 |
120.0 |
| H11 |
C1 |
N1 |
H1 |
300.6 |
60.1 |
| H11 |
C1 |
N1 |
H2 |
60.6 |
184.0 |
| C3 |
C2 |
H12 |
H13 |
118.1 |
240.0 |
| H12 |
C2 |
C1 |
H10 |
47.3 |
180.0 |
| H12 |
C2 |
C1 |
H11 |
166.2 |
60.0 |
| C3 |
C2 |
H13 |
H12 |
241.9 |
120.0 |
| H13 |
C2 |
C1 |
H10 |
288.7 |
300.0 |
| H13 |
C2 |
C1 |
H11 |
47.5 |
180.0 |
| H14 |
C3 |
N2 |
C11 |
205.8 |
150.1 |
| N2 |
C3 |
H14 |
H15 |
118.6 |
239.9 |
| H14 |
C3 |
C2 |
H12 |
258.0 |
180.0 |
| H14 |
C3 |
C2 |
H13 |
16.7 |
60.0 |
| H15 |
C3 |
N2 |
C11 |
324.9 |
30.0 |
| N2 |
C3 |
H15 |
H14 |
241.4 |
120.0 |
| H15 |
C3 |
C2 |
H12 |
138.8 |
300.0 |
| H15 |
C3 |
C2 |
H13 |
257.6 |
180.0 |