PDB Chemical Component WOE
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for WOE
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C1 |
O2 |
1.430 |
1.430 |
| O2 |
C3 |
1.371 |
1.358 |
| C3 |
C4 |
1.385 |
1.387 |
| C3 |
C8 |
1.406 |
1.400 |
| C4 |
C5 |
1.376 |
1.382 |
| C5 |
C6 |
1.386 |
1.384 |
| C6 |
C7 |
1.384 |
1.379 |
| C7 |
C8 |
1.388 |
1.394 |
| C8 |
C9 |
1.482 |
1.482 |
| C9 |
C10 |
1.373 |
1.396 |
| C9 |
N16 |
1.345 |
1.332 |
| C10 |
C11 |
1.384 |
1.385 |
| C11 |
CL1 |
1.737 |
1.736 |
| C11 |
N13 |
1.339 |
1.325 |
| N13 |
C14 |
1.368 |
1.325 |
| C14 |
N15 |
1.384 |
1.384 |
| C14 |
N16 |
1.362 |
1.323 |
| C1 |
H11C |
1.100 |
1.090 |
| C1 |
H12C |
1.099 |
1.089 |
| C1 |
H13C |
1.100 |
1.090 |
| C4 |
H4 |
1.080 |
1.079 |
| C5 |
H5 |
1.080 |
1.080 |
| C6 |
H6 |
1.079 |
1.080 |
| C7 |
H7 |
1.080 |
1.080 |
| C10 |
H10 |
1.080 |
1.080 |
| N15 |
H151 |
1.000 |
0.969 |
| N15 |
H152 |
1.000 |
0.971 |
Bond Angles for WOE
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C1 |
O2 |
C3 |
117.7 |
117.0 |
| O2 |
C1 |
H11C |
109.5 |
109.5 |
| O2 |
C1 |
H12C |
109.5 |
109.5 |
| O2 |
C1 |
H13C |
109.5 |
109.4 |
| O2 |
C3 |
C4 |
124.6 |
120.1 |
| O2 |
C3 |
C8 |
115.1 |
120.1 |
| C4 |
C3 |
C8 |
120.3 |
119.7 |
| C3 |
C4 |
C5 |
120.1 |
120.1 |
| C3 |
C4 |
H4 |
120.0 |
120.0 |
| C3 |
C8 |
C7 |
118.9 |
119.7 |
| C3 |
C8 |
C9 |
122.0 |
120.1 |
| C4 |
C5 |
C6 |
120.1 |
120.3 |
| C5 |
C4 |
H4 |
119.9 |
120.0 |
| C4 |
C5 |
H5 |
120.0 |
119.8 |
| C5 |
C6 |
C7 |
120.4 |
120.2 |
| C6 |
C5 |
H5 |
120.0 |
119.9 |
| C5 |
C6 |
H6 |
119.8 |
119.9 |
| C6 |
C7 |
C8 |
120.3 |
120.0 |
| C7 |
C6 |
H6 |
119.8 |
119.8 |
| C6 |
C7 |
H7 |
119.9 |
120.0 |
| C7 |
C8 |
C9 |
119.1 |
120.2 |
| C8 |
C7 |
H7 |
119.9 |
120.0 |
| C8 |
C9 |
C10 |
122.5 |
120.5 |
| C8 |
C9 |
N16 |
116.5 |
120.5 |
| C10 |
C9 |
N16 |
121.0 |
119.0 |
| C9 |
C10 |
C11 |
117.8 |
118.5 |
| C9 |
C10 |
H10 |
121.1 |
120.7 |
| C9 |
N16 |
C14 |
117.6 |
120.6 |
| C10 |
C11 |
CL1 |
119.7 |
120.4 |
| C10 |
C11 |
N13 |
123.8 |
119.2 |
| C11 |
C10 |
H10 |
121.1 |
120.8 |
| CL1 |
C11 |
N13 |
116.5 |
120.4 |
| C11 |
N13 |
C14 |
114.8 |
121.0 |
| N13 |
C14 |
N15 |
117.7 |
119.1 |
| N13 |
C14 |
N16 |
125.0 |
121.7 |
| N15 |
C14 |
N16 |
117.3 |
119.2 |
| C14 |
N15 |
H151 |
109.5 |
120.1 |
| C14 |
N15 |
H152 |
109.4 |
120.0 |
| H11C |
C1 |
H12C |
109.5 |
109.5 |
| H11C |
C1 |
H13C |
109.4 |
109.5 |
| H12C |
C1 |
H13C |
109.5 |
109.5 |
| H151 |
N15 |
H152 |
109.5 |
120.0 |
Torsion Angles for WOE
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C1 |
O2 |
C3 |
C4 |
326.4 |
0.0 |
| C1 |
O2 |
C3 |
C8 |
144.8 |
179.8 |
| H11C |
C1 |
O2 |
H12C |
240.0 |
240.0 |
| H11C |
C1 |
O2 |
H13C |
120.0 |
120.0 |
| H12C |
C1 |
O2 |
H13C |
240.0 |
240.0 |
| C3 |
O2 |
C1 |
H11C |
167.3 |
60.0 |
| C3 |
O2 |
C1 |
H12C |
287.3 |
180.0 |
| C3 |
O2 |
C1 |
H13C |
47.3 |
300.0 |
| C4 |
C3 |
O2 |
C8 |
181.7 |
180.2 |
| O2 |
C3 |
C4 |
C5 |
180.2 |
180.0 |
| O2 |
C3 |
C4 |
H4 |
0.2 |
359.9 |
| O2 |
C3 |
C8 |
C7 |
179.8 |
179.8 |
| O2 |
C3 |
C8 |
C9 |
1.3 |
359.9 |
| O2 |
C3 |
C4 |
C8 |
178.2 |
179.8 |
| C4 |
C3 |
C8 |
C7 |
358.2 |
359.5 |
| C4 |
C3 |
C8 |
C9 |
179.7 |
179.7 |
| C3 |
C4 |
C5 |
C6 |
358.3 |
360.0 |
| C5 |
C4 |
C3 |
H4 |
180.0 |
180.1 |
| C3 |
C4 |
C5 |
H5 |
178.2 |
180.0 |
| O2 |
C3 |
C8 |
C4 |
181.6 |
180.2 |
| C8 |
C3 |
C4 |
C5 |
2.0 |
0.3 |
| C8 |
C3 |
C4 |
H4 |
182.0 |
180.2 |
| C6 |
C7 |
C8 |
C3 |
1.4 |
0.4 |
| C7 |
C8 |
C3 |
C9 |
178.4 |
179.9 |
| C3 |
C8 |
C7 |
H7 |
181.5 |
180.3 |
| C3 |
C8 |
C9 |
C10 |
228.3 |
180.0 |
| C3 |
C8 |
C9 |
N16 |
47.7 |
359.8 |
| C5 |
C4 |
C3 |
C8 |
2.0 |
0.3 |
| C3 |
C4 |
C5 |
H4 |
180.0 |
179.9 |
| C4 |
C5 |
C6 |
C7 |
1.4 |
360.0 |
| C6 |
C5 |
C4 |
H5 |
180.0 |
180.0 |
| C4 |
C5 |
C6 |
H6 |
181.4 |
180.0 |
| C6 |
C5 |
C4 |
H4 |
178.3 |
180.1 |
| C4 |
C5 |
C6 |
H5 |
180.0 |
180.0 |
| C5 |
C6 |
C7 |
C8 |
358.8 |
359.8 |
| C7 |
C6 |
C5 |
H6 |
180.0 |
180.0 |
| C5 |
C6 |
C7 |
H7 |
178.8 |
179.9 |
| C3 |
C8 |
C7 |
C6 |
1.4 |
0.4 |
| C7 |
C6 |
C5 |
H5 |
181.4 |
180.0 |
| C5 |
C6 |
C7 |
H6 |
180.0 |
180.0 |
| C6 |
C7 |
C8 |
C9 |
179.9 |
180.3 |
| C8 |
C7 |
C6 |
H7 |
180.0 |
179.9 |
| C3 |
C8 |
C7 |
C9 |
181.5 |
180.1 |
| C8 |
C7 |
C6 |
H6 |
178.8 |
179.8 |
| C6 |
C7 |
C8 |
H7 |
180.0 |
180.1 |
| C7 |
C8 |
C9 |
C10 |
49.8 |
0.2 |
| C7 |
C8 |
C9 |
N16 |
229.3 |
179.9 |
| C3 |
C8 |
C9 |
C7 |
178.4 |
179.9 |
| C9 |
C8 |
C7 |
H7 |
359.9 |
0.2 |
| C10 |
C9 |
C8 |
N16 |
180.5 |
180.3 |
| C8 |
C9 |
C10 |
C11 |
181.3 |
180.0 |
| C8 |
C9 |
C10 |
H10 |
1.2 |
360.0 |
| C8 |
C9 |
N16 |
C14 |
178.4 |
179.7 |
| C8 |
C9 |
C10 |
N16 |
179.4 |
179.8 |
| C10 |
C9 |
N16 |
C14 |
357.8 |
359.5 |
| C9 |
C10 |
C11 |
CL1 |
178.7 |
180.0 |
| C9 |
C10 |
C11 |
N13 |
358.7 |
360.0 |
| C11 |
C10 |
C9 |
H10 |
180.0 |
180.0 |
| C8 |
C9 |
N16 |
C10 |
180.5 |
180.2 |
| N16 |
C9 |
C10 |
C11 |
1.8 |
0.3 |
| N16 |
C9 |
C10 |
H10 |
181.8 |
180.2 |
| N13 |
C14 |
N16 |
C9 |
2.1 |
0.6 |
| N15 |
C14 |
N16 |
C9 |
180.1 |
180.3 |
| C11 |
C10 |
C9 |
N16 |
1.8 |
0.3 |
| C9 |
C10 |
C11 |
H10 |
180.0 |
180.0 |
| CL1 |
C11 |
C10 |
N13 |
180.0 |
180.1 |
| C10 |
C11 |
N13 |
C14 |
1.1 |
0.1 |
| C10 |
C11 |
CL1 |
N13 |
180.0 |
179.9 |
| CL1 |
C11 |
C10 |
H10 |
358.8 |
0.1 |
| CL1 |
C11 |
N13 |
C14 |
181.1 |
180.0 |
| C10 |
C11 |
N13 |
CL1 |
180.0 |
180.1 |
| N13 |
C11 |
C10 |
H10 |
178.7 |
180.0 |
| C11 |
N13 |
C14 |
N15 |
180.4 |
180.0 |
| C11 |
N13 |
C14 |
N16 |
358.5 |
359.7 |
| C9 |
N16 |
C14 |
N13 |
2.1 |
0.6 |
| N15 |
C14 |
N13 |
N16 |
182.0 |
180.3 |
| N13 |
C14 |
N15 |
H151 |
58.3 |
0.1 |
| N13 |
C14 |
N15 |
H152 |
178.3 |
179.9 |
| C9 |
N16 |
C14 |
N15 |
180.1 |
180.3 |
| N13 |
C14 |
N15 |
N16 |
178.2 |
179.7 |
| H151 |
N15 |
C14 |
H152 |
240.0 |
180.1 |
| N13 |
C14 |
N16 |
N15 |
182.0 |
180.3 |
| N16 |
C14 |
N15 |
H151 |
240.1 |
180.3 |
| N16 |
C14 |
N15 |
H152 |
0.1 |
0.2 |
| H11C |
C1 |
O2 |
C3 |
167.3 |
60.0 |
| O2 |
C1 |
H11C |
H12C |
120.0 |
120.0 |
| O2 |
C1 |
H11C |
H13C |
240.0 |
240.1 |
| H12C |
C1 |
H11C |
H13C |
120.0 |
120.1 |
| H12C |
C1 |
O2 |
C3 |
287.3 |
180.0 |
| O2 |
C1 |
H12C |
H11C |
240.0 |
240.0 |
| O2 |
C1 |
H12C |
H13C |
120.0 |
119.9 |
| H11C |
C1 |
H12C |
H13C |
240.0 |
239.9 |
| H13C |
C1 |
O2 |
C3 |
47.3 |
300.0 |
| O2 |
C1 |
H13C |
H11C |
120.0 |
120.0 |
| O2 |
C1 |
H13C |
H12C |
240.0 |
240.0 |
| H11C |
C1 |
H13C |
H12C |
120.0 |
120.1 |
| H4 |
C4 |
C3 |
C8 |
182.0 |
180.2 |
| C3 |
C4 |
H4 |
C5 |
180.0 |
180.1 |
| H4 |
C4 |
C5 |
C6 |
178.3 |
180.1 |
| H4 |
C4 |
C5 |
H5 |
358.2 |
0.1 |
| C4 |
C5 |
H5 |
C6 |
180.0 |
180.0 |
| H5 |
C5 |
C4 |
H4 |
358.2 |
0.1 |
| H5 |
C5 |
C6 |
C7 |
181.4 |
180.0 |
| H5 |
C5 |
C6 |
H6 |
1.4 |
360.0 |
| C5 |
C6 |
H6 |
C7 |
180.0 |
180.0 |
| H6 |
C6 |
C5 |
H5 |
1.4 |
360.0 |
| H6 |
C6 |
C7 |
C8 |
178.8 |
179.8 |
| H6 |
C6 |
C7 |
H7 |
358.8 |
359.9 |
| C6 |
C7 |
H7 |
C8 |
180.0 |
179.9 |
| H7 |
C7 |
C6 |
H6 |
358.8 |
359.9 |
| H7 |
C7 |
C8 |
C9 |
359.9 |
0.2 |
| H10 |
C10 |
C9 |
N16 |
181.8 |
180.2 |
| C9 |
C10 |
H10 |
C11 |
180.0 |
180.0 |
| H10 |
C10 |
C11 |
CL1 |
358.8 |
0.1 |
| H10 |
C10 |
C11 |
N13 |
178.7 |
180.0 |
| H151 |
N15 |
C14 |
N16 |
240.1 |
180.3 |
| C14 |
N15 |
H151 |
H152 |
120.0 |
179.9 |
| H152 |
N15 |
C14 |
N16 |
0.1 |
0.2 |
| C14 |
N15 |
H152 |
H151 |
240.0 |
180.1 |