PDB Chemical Component WM2
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for WM2
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C3 |
C2 |
1.578 |
1.530 |
| C3 |
C4 |
1.562 |
1.531 |
| C2 |
C1 |
1.560 |
1.531 |
| O9 |
C7 |
1.188 |
1.213 |
| C4 |
C5 |
1.554 |
1.530 |
| C1 |
C7 |
1.519 |
1.507 |
| C1 |
C6 |
1.554 |
1.530 |
| C7 |
N8 |
1.347 |
1.348 |
| C5 |
C6 |
1.547 |
1.530 |
| N8 |
H1 |
1.000 |
0.970 |
| N8 |
H2 |
0.999 |
0.971 |
| C1 |
H3 |
1.100 |
1.090 |
| C6 |
H4 |
1.100 |
1.090 |
| C6 |
H5 |
1.100 |
1.090 |
| C5 |
H6 |
1.100 |
1.090 |
| C5 |
H7 |
1.100 |
1.090 |
| C4 |
H8 |
1.099 |
1.091 |
| C4 |
H9 |
1.100 |
1.090 |
| C3 |
H10 |
1.100 |
1.090 |
| C3 |
H11 |
1.100 |
1.090 |
| C2 |
H12 |
1.100 |
1.090 |
| C2 |
H13 |
1.100 |
1.090 |
Bond Angles for WM2
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
C3 |
H10 |
109.4 |
109.5 |
| C2 |
C3 |
H11 |
109.4 |
109.5 |
| C3 |
C2 |
H12 |
110.8 |
109.5 |
| C3 |
C2 |
H13 |
110.8 |
109.5 |
| C3 |
C4 |
H8 |
109.3 |
109.5 |
| C3 |
C4 |
H9 |
109.3 |
109.5 |
| C2 |
C1 |
H3 |
109.6 |
109.5 |
| O9 |
C7 |
N8 |
123.1 |
120.0 |
| C4 |
C5 |
H6 |
109.0 |
109.5 |
| C4 |
C5 |
H7 |
109.1 |
109.5 |
| C6 |
C1 |
H3 |
109.6 |
109.4 |
| C1 |
C6 |
H4 |
109.3 |
109.5 |
| C1 |
C6 |
H5 |
109.3 |
109.5 |
| C7 |
N8 |
H1 |
120.0 |
120.0 |
| C7 |
N8 |
H2 |
120.0 |
120.0 |
| C5 |
C6 |
H4 |
109.3 |
109.5 |
| C5 |
C6 |
H5 |
109.3 |
109.5 |
| H1 |
N8 |
H2 |
120.0 |
119.9 |
| H4 |
C6 |
H5 |
109.5 |
109.4 |
| H6 |
C5 |
H7 |
109.4 |
109.5 |
| H8 |
C4 |
H9 |
109.5 |
109.5 |
| H10 |
C3 |
H11 |
109.4 |
109.5 |
| H12 |
C2 |
H13 |
109.5 |
109.5 |
Torsion Angles for WM2
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
C3 |
C4 |
H8 |
60.3 |
180.0 |
| C2 |
C3 |
C4 |
H9 |
180.2 |
60.0 |
| C3 |
C2 |
C1 |
H3 |
52.6 |
60.0 |
| H10 |
C3 |
C2 |
H11 |
240.1 |
120.1 |
| H12 |
C2 |
C3 |
H13 |
238.2 |
120.1 |
| C3 |
C4 |
C5 |
H6 |
173.2 |
300.1 |
| C3 |
C4 |
C5 |
H7 |
292.7 |
180.0 |
| H8 |
C4 |
C3 |
H9 |
240.1 |
120.0 |
| C6 |
C1 |
C2 |
H3 |
240.3 |
240.0 |
| C2 |
C1 |
C6 |
H4 |
183.6 |
180.0 |
| C2 |
C1 |
C6 |
H5 |
303.4 |
300.0 |
| O9 |
C7 |
N8 |
H1 |
0.0 |
360.0 |
| O9 |
C7 |
N8 |
H2 |
180.0 |
180.0 |
| C4 |
C5 |
C6 |
H4 |
184.9 |
180.0 |
| C4 |
C5 |
C6 |
H5 |
65.1 |
60.0 |
| H6 |
C5 |
C4 |
H7 |
240.5 |
120.0 |
| C1 |
C7 |
N8 |
H1 |
183.3 |
180.3 |
| C1 |
C7 |
N8 |
H2 |
3.3 |
0.3 |
| C2 |
C1 |
C6 |
H3 |
119.7 |
120.0 |
| C5 |
C6 |
C1 |
H4 |
239.9 |
240.0 |
| C5 |
C6 |
C1 |
H5 |
120.1 |
120.0 |
| H4 |
C6 |
C1 |
H5 |
240.3 |
240.0 |
| H1 |
N8 |
C7 |
H2 |
180.0 |
180.0 |
| C5 |
C6 |
C1 |
H3 |
303.8 |
300.0 |
| C1 |
C6 |
C5 |
H4 |
120.1 |
120.1 |
| C1 |
C6 |
C5 |
H5 |
239.9 |
240.0 |
| H4 |
C6 |
C5 |
H5 |
119.8 |
119.9 |
| C7 |
N8 |
H1 |
H2 |
180.0 |
180.0 |
| C7 |
N8 |
H2 |
H1 |
180.0 |
180.0 |
| H3 |
C1 |
C6 |
H4 |
63.9 |
60.0 |
| H3 |
C1 |
C6 |
H5 |
183.7 |
180.0 |
| H4 |
C6 |
C1 |
H3 |
63.9 |
60.0 |
| C1 |
C6 |
H4 |
H5 |
119.6 |
120.0 |
| C5 |
C6 |
H4 |
H5 |
240.3 |
240.1 |
| H5 |
C6 |
C1 |
H3 |
183.7 |
180.0 |
| C1 |
C6 |
H5 |
H4 |
240.4 |
240.0 |
| C5 |
C6 |
H5 |
H4 |
119.7 |
119.9 |
| C4 |
C5 |
H6 |
H7 |
119.2 |
240.0 |
| H6 |
C5 |
C6 |
H4 |
64.6 |
299.9 |
| H6 |
C5 |
C6 |
H5 |
304.8 |
180.0 |
| C4 |
C5 |
H7 |
H6 |
240.8 |
120.0 |
| H7 |
C5 |
C6 |
H4 |
305.2 |
59.9 |
| H7 |
C5 |
C6 |
H5 |
185.4 |
300.0 |
| C3 |
C4 |
H8 |
H9 |
119.8 |
240.0 |
| H8 |
C4 |
C5 |
H6 |
53.2 |
60.0 |
| H8 |
C4 |
C5 |
H7 |
172.6 |
300.0 |
| C3 |
C4 |
H9 |
H8 |
240.2 |
120.0 |
| H9 |
C4 |
C5 |
H6 |
293.3 |
180.0 |
| H9 |
C4 |
C5 |
H7 |
52.8 |
60.0 |
| C2 |
C3 |
H10 |
H11 |
119.8 |
240.0 |
| H10 |
C3 |
C2 |
H12 |
305.1 |
180.1 |
| H10 |
C3 |
C2 |
H13 |
66.8 |
60.0 |
| H10 |
C3 |
C4 |
H8 |
300.2 |
300.0 |
| H10 |
C3 |
C4 |
H9 |
60.1 |
180.0 |
| C2 |
C3 |
H11 |
H10 |
240.2 |
120.1 |
| H11 |
C3 |
C2 |
H12 |
64.9 |
60.0 |
| H11 |
C3 |
C2 |
H13 |
186.7 |
299.9 |
| H11 |
C3 |
C4 |
H8 |
180.4 |
60.1 |
| H11 |
C3 |
C4 |
H9 |
300.2 |
300.0 |
| H12 |
C2 |
C3 |
H10 |
305.1 |
180.1 |
| H12 |
C2 |
C3 |
H11 |
64.9 |
60.0 |
| C3 |
C2 |
H12 |
H13 |
122.6 |
239.9 |
| H12 |
C2 |
C1 |
H3 |
293.5 |
180.0 |
| H13 |
C2 |
C3 |
H10 |
66.8 |
60.0 |
| H13 |
C2 |
C3 |
H11 |
186.7 |
299.9 |
| C3 |
C2 |
H13 |
H12 |
237.4 |
120.1 |
| H13 |
C2 |
C1 |
H3 |
171.7 |
300.0 |