PDB Chemical Component WHJ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for WHJ

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O1	C9	1.246	1.219
C9	N1	1.348	1.345
C9	C8	1.396	1.411
N1	C7	1.337	1.380
C7	C6	1.475	1.396
C7	C2	1.487	1.406
C6	O2	1.349	1.360
C6	C5	1.396	1.382
C5	C4	1.393	1.388
C4	C3	1.411	1.365
C8	C1	1.393	1.356
C1	C2	1.390	1.464
C2	C3	1.500	1.400
C3	C10	1.497	1.507
C10	O4	1.435	1.429
C10	C11	1.527	1.530
C11	N2	1.461	1.469
N2	C12	1.465	1.469
C12	C13	1.532	1.530
C12	C14	1.529	1.530
C14	C15	1.511	1.506
C15	C20	1.400	1.383
C15	C16	1.391	1.383
C20	C19	1.391	1.381
C19	C18	1.399	1.388
C18	O3	1.381	1.359
C18	C17	1.398	1.387
O3	C21	1.434	1.429
C17	C16	1.394	1.381
N1	H1	1.000	0.970
C8	H8	1.080	1.080
O2	H2	0.950	0.967
C5	H5	1.080	1.080
C4	H4	1.080	1.081
C1	HA	1.080	1.080
C10	H10	1.100	1.090
O4	HB	0.950	0.967
C11	H111	1.100	1.090
C11	H112	1.100	1.090
N2	HC	0.999	1.009
C12	H12	1.100	1.090
C13	H131	1.100	1.090
C13	H132	1.100	1.090
C13	H133	1.100	1.090
C14	H141	1.100	1.090
C14	H142	1.100	1.090
C20	H20	1.080	1.080
C16	H16	1.080	1.080
C19	H19	1.080	1.080
C17	H17	1.080	1.080
C21	H211	1.100	1.090
C21	H212	1.100	1.090
C21	H213	1.100	1.090

Bond Angles for WHJ

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O1	C9	N1	119.7	119.1
O1	C9	C8	118.2	119.2
N1	C9	C8	122.0	121.6
C9	N1	C7	120.0	120.9
C9	N1	H1	120.0	119.5
C9	C8	C1	120.7	120.2
C9	C8	H8	119.7	119.9
N1	C7	C6	120.9	121.0
N1	C7	C2	120.7	119.6
C7	N1	H1	120.0	119.5
C6	C7	C2	118.4	119.4
C7	C6	O2	117.7	120.2
C7	C6	C5	120.6	119.6
C7	C2	C1	117.9	119.0
C7	C2	C3	118.1	119.9
O2	C6	C5	121.7	120.2
C6	O2	H2	109.5	114.0
C6	C5	C4	121.1	120.7
C6	C5	H5	119.5	119.6
C5	C4	C3	123.6	120.7
C4	C5	H5	119.4	119.7
C5	C4	H4	118.2	119.7
C4	C3	C2	118.1	119.8
C4	C3	C10	120.8	120.1
C3	C4	H4	118.2	119.7
C8	C1	C2	118.7	118.6
C1	C8	H8	119.7	119.9
C8	C1	HA	120.7	120.7
C1	C2	C3	123.9	121.1
C2	C1	HA	120.7	120.8
C2	C3	C10	121.1	120.1
C3	C10	O4	110.9	109.5
C3	C10	C11	109.8	109.5
C3	C10	H10	107.4	109.5
O4	C10	C11	106.5	109.4
O4	C10	H10	110.6	109.5
C10	O4	HB	109.5	114.0
C10	C11	N2	112.2	109.5
C11	C10	H10	111.7	109.5
C10	C11	H111	108.6	109.5
C10	C11	H112	108.0	109.5
C11	N2	C12	121.0	111.0
N2	C11	H111	108.6	109.5
N2	C11	H112	108.0	109.5
C11	N2	HC	105.8	111.0
N2	C12	C13	113.4	109.4
N2	C12	C14	110.9	109.5
C12	N2	HC	105.8	111.0
N2	C12	H12	105.8	109.5
C13	C12	C14	109.7	109.5
C13	C12	H12	107.1	109.5
C12	C13	H131	109.5	109.5
C12	C13	H132	109.5	109.5
C12	C13	H133	109.5	109.5
C12	C14	C15	108.0	109.5
C14	C12	H12	109.8	109.5
C12	C14	H141	110.0	109.4
C12	C14	H142	110.3	109.5
C14	C15	C20	120.6	120.0
C14	C15	C16	119.3	120.0
C15	C14	H141	110.0	109.5
C15	C14	H142	110.3	109.5
C20	C15	C16	120.1	120.1
C15	C20	C19	119.9	120.1
C15	C20	H20	120.0	120.0
C15	C16	C17	120.0	120.1
C15	C16	H16	120.0	119.9
C20	C19	C18	120.0	120.0
C19	C20	H20	120.0	120.0
C20	C19	H19	120.0	120.0
C19	C18	O3	120.1	120.1
C19	C18	C17	119.9	119.9
C18	C19	H19	120.0	120.0
O3	C18	C17	120.0	120.1
C18	O3	C21	121.0	117.0
C18	C17	C16	120.1	120.0
C18	C17	H17	120.0	120.0
O3	C21	H211	109.5	109.5
O3	C21	H212	109.5	109.5
O3	C21	H213	109.5	109.5
C17	C16	H16	120.0	120.0
C16	C17	H17	120.0	120.0
H111	C11	H112	111.6	109.4
H131	C13	H132	109.4	109.4
H131	C13	H133	109.4	109.5
H132	C13	H133	109.5	109.4
H141	C14	H142	108.3	109.5
H211	C21	H212	109.5	109.5
H211	C21	H213	109.4	109.5
H212	C21	H213	109.5	109.5

Torsion Angles for WHJ

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
N1	C9	O1	C8	179.9	180.3
O1	C9	N1	C7	180.1	180.0
O1	C9	N1	H1	0.1	359.9
O1	C9	C8	C1	179.7	180.1
O1	C9	C8	H8	359.7	0.0
O1	C9	N1	C8	180.1	179.7
N1	C9	C8	C1	359.9	359.7
N1	C9	C8	H8	179.8	179.7
C9	N1	C7	C6	180.2	180.0
C9	N1	C7	C2	0.5	360.0
C7	N1	C9	H1	180.0	180.0
O1	C9	C8	N1	179.9	180.3
C8	C9	N1	C7	359.9	0.3
C8	C9	N1	H1	179.9	180.3
C9	C8	C1	C2	359.8	360.0
C1	C8	C9	H8	180.0	180.0
C9	C8	C1	HA	179.8	180.0
C7	N1	C9	C8	359.9	0.3
C9	N1	C7	H1	180.0	180.0
C6	C7	N1	C2	179.6	180.1
N1	C7	C6	O2	359.2	360.0
N1	C7	C6	C5	180.2	180.0
N1	C7	C2	C1	359.2	359.8
N1	C7	C2	C3	180.1	180.0
N1	C7	C6	C2	180.3	179.9
C6	C7	N1	H1	0.2	0.1
C6	C7	C2	C1	179.6	179.7
C6	C7	C2	C3	0.4	360.0
O2	C6	C7	C5	179.0	180.0
C7	C6	O2	H2	204.5	90.0
C7	C6	C5	C4	359.9	360.0
C7	C6	C5	H5	179.9	180.0
N1	C7	C2	C6	179.7	180.1
C2	C7	N1	H1	180.5	180.0
C2	C7	C6	O2	178.8	180.0
C2	C7	C6	C5	359.8	0.1
C4	C3	C2	C7	359.6	0.0
C8	C1	C2	C7	0.6	0.3
C1	C2	C7	C3	179.1	179.8
C7	C2	C1	HA	180.6	180.3
C7	C2	C3	C10	179.0	180.1
O2	C6	C7	C2	178.8	180.0
C7	C6	O2	C5	181.0	180.0
O2	C6	C5	C4	180.9	180.0
O2	C6	C5	H5	0.9	0.0
C5	C6	C7	C2	359.8	0.1
C7	C6	C5	O2	179.0	180.0
C5	C6	O2	H2	23.5	270.0
C6	C5	C4	C3	0.2	360.0
C4	C5	C6	H5	180.0	180.0
C6	C5	C4	H4	180.2	179.9
C6	C5	C4	H5	180.0	180.0
C5	C4	C3	C2	0.1	0.0
C5	C4	C3	C10	180.7	180.0
C3	C4	C5	H4	180.0	180.0
C7	C2	C3	C4	359.6	0.0
C3	C4	C5	H5	180.2	180.0
C5	C4	C3	H4	180.0	180.0
C1	C2	C3	C4	180.6	180.3
C2	C3	C4	C10	179.4	180.1
C4	C3	C10	O4	351.8	335.0
C4	C3	C10	C11	109.2	95.0
C4	C3	C10	H10	230.8	215.0
C9	C8	C1	H8	180.0	180.0
C7	C2	C1	C8	0.6	0.3
C8	C1	C2	C3	179.7	180.0
C2	C1	C8	HA	180.0	180.0
C7	C2	C1	C3	180.9	180.3
C4	C3	C2	C1	180.6	180.3
C2	C1	C8	H8	179.9	180.0
C8	C1	C2	HA	180.0	180.0
C1	C2	C3	C10	360.0	0.3
C7	C2	C3	C1	179.1	179.7
C4	C3	C2	C10	180.6	179.9
C2	C3	C4	H4	180.1	180.1
C3	C2	C1	HA	359.7	0.0
C2	C3	C10	O4	172.4	155.0
C2	C3	C10	C11	289.8	274.9
C2	C3	C10	H10	51.4	35.0
C4	C3	C10	C2	179.4	180.1
C10	C3	C4	H4	0.7	0.0
O4	C10	C3	C11	242.6	240.0
O4	C10	C3	H10	121.0	120.0
C3	C10	O4	HB	102.8	60.0
C3	C10	C11	N2	180.4	180.0
C11	C10	C3	H10	238.4	240.0
C3	C10	C11	H111	300.4	300.0
C3	C10	C11	H112	61.5	60.0
C3	C10	O4	C11	119.4	120.0
C3	C10	O4	H10	241.0	240.0
O4	C10	C11	N2	300.5	300.0
C11	C10	O4	H10	121.6	120.0
O4	C10	C11	H111	60.5	60.0
O4	C10	C11	H112	181.6	180.0
C3	C10	C11	O4	239.9	240.0
C3	C10	C11	H10	119.0	120.0
O4	C10	C11	H10	239.1	240.0
C11	C10	O4	HB	343.4	300.0
C10	C11	N2	C12	200.1	180.0
N2	C11	C10	H111	240.0	240.0
N2	C11	C10	H112	118.9	120.0
C10	C11	N2	HC	320.1	303.9
H111	C11	C10	H112	238.9	240.1
N2	C11	C10	H10	61.4	60.0
C10	C11	N2	H111	120.0	120.0
C10	C11	N2	H112	241.2	240.0
C11	N2	C12	C13	299.5	275.0
C11	N2	C12	C14	175.7	155.0
C12	N2	C11	HC	240.0	236.1
C11	N2	C12	H12	56.7	35.0
H111	C11	N2	H112	121.1	120.0
C12	N2	C11	H111	80.0	60.0
C12	N2	C11	H112	318.9	300.0
C11	N2	C12	HC	120.0	123.9
C13	C12	N2	C14	123.9	120.0
C13	C12	N2	H12	242.9	240.0
N2	C12	C13	H131	138.6	180.0
N2	C12	C13	H132	258.5	300.0
N2	C12	C13	H133	18.6	60.0
N2	C12	C14	C15	222.7	295.0
C14	C12	N2	H12	119.0	120.0
N2	C12	C14	H141	342.7	55.0
N2	C12	C14	H142	102.1	174.9
N2	C12	C13	C14	235.5	240.0
C13	C12	N2	HC	179.5	151.1
N2	C12	C13	H12	116.3	120.0
C13	C12	C14	C15	96.7	175.0
C14	C12	C13	H12	240.9	240.0
C13	C12	C14	H141	216.7	295.0
C13	C12	C14	H142	336.1	55.0
H131	C13	C12	H132	240.0	240.0
H131	C13	C12	H133	120.0	120.1
H132	C13	C12	H133	240.0	240.0
N2	C12	C14	C13	126.0	120.0
C14	C12	N2	HC	55.7	31.1
N2	C12	C14	H12	243.4	240.0
C13	C12	C14	H12	117.5	120.0
C14	C12	C13	H131	263.1	300.1
C14	C12	C13	H132	23.1	60.0
C14	C12	C13	H133	143.1	180.0
C12	C14	C15	C20	80.4	90.0
C12	C14	C15	C16	261.0	269.7
C15	C14	C12	H141	240.0	240.0
C15	C14	C12	H142	120.6	120.1
H141	C14	C12	H142	240.6	240.0
C15	C14	C12	H12	339.3	55.0
C12	C14	C15	H141	120.0	120.0
C12	C14	C15	H142	239.4	240.0
C20	C15	C14	C16	179.5	180.3
C14	C15	C20	C19	180.9	180.0
C14	C15	C20	H20	0.9	0.0
C14	C15	C16	C17	179.3	179.7
C14	C15	C16	H16	359.3	360.0
H141	C14	C15	H142	119.4	120.0
C14	C15	C20	C16	180.5	179.7
C20	C15	C14	H141	320.4	330.0
C20	C15	C14	H142	201.0	210.0
C20	C15	C16	C17	359.8	359.5
C20	C15	C16	H16	179.8	179.7
C15	C20	C19	C18	359.5	0.0
C19	C20	C15	H20	180.0	180.0
C15	C20	C19	H19	179.5	180.0
C14	C15	C16	C20	179.5	180.3
C16	C15	C14	H141	141.0	149.8
C16	C15	C14	H142	21.6	29.7
C16	C15	C20	C19	0.4	0.3
C16	C15	C20	H20	180.4	180.3
C18	C17	C16	C15	0.1	0.5
C17	C16	C15	H16	180.0	179.8
C15	C16	C17	H17	180.1	180.3
C19	C20	C15	C16	0.4	0.3
C15	C20	C19	H20	180.0	180.0
C20	C19	C18	O3	180.6	180.0
C20	C19	C18	C17	0.4	360.0
C18	C19	C20	H19	180.0	180.0
C18	C19	C20	H20	179.5	180.0
C20	C19	C18	H19	180.0	180.0
O3	C18	C19	C17	180.2	180.1
C19	C18	O3	C21	108.1	180.0
C19	C18	C17	C16	359.8	359.8
C19	C18	C17	H17	179.8	180.0
C19	C18	O3	C17	179.8	179.9
O3	C18	C19	H19	0.6	0.1
O3	C18	C17	C16	179.6	179.7
O3	C18	C17	H17	359.6	359.9
C18	O3	C21	H211	161.5	300.0
C18	O3	C21	H212	281.6	59.9
C18	O3	C21	H213	41.6	179.9
C15	C16	C17	C18	0.1	0.5
C19	C18	C17	O3	180.2	180.1
C17	C18	C19	H19	180.4	180.0
C17	C18	O3	C21	288.3	0.1
C18	C17	C16	H16	180.1	180.3
C16	C17	C18	H17	180.0	179.8
C21	O3	C18	C17	288.3	0.1
H211	C21	O3	H212	240.0	240.0
H211	C21	O3	H213	119.9	120.0
H212	C21	O3	H213	240.0	240.0
C15	C16	C17	H16	180.0	180.2
C18	C17	C16	H17	180.0	180.2
H1	N1	C9	C8	179.9	180.3
C9	N1	H1	C7	180.0	180.0
H1	N1	C7	C6	0.2	0.1
H1	N1	C7	C2	180.5	180.0
C9	C8	H8	C1	180.0	180.0
H8	C8	C1	C2	179.9	180.0
H8	C8	C1	HA	359.9	360.0
H2	O2	C6	C5	23.5	270.0
C6	C5	H5	C4	180.0	180.0
H5	C5	C4	C3	180.2	180.0
H5	C5	C4	H4	0.2	359.9
C5	C4	H4	C3	180.0	180.0
H4	C4	C5	H5	0.2	359.9
H4	C4	C3	C2	180.1	180.1
H4	C4	C3	C10	0.7	0.0
C8	C1	HA	C2	180.0	180.0
HA	C1	C8	H8	359.9	360.0
HA	C1	C2	C3	359.7	0.0
C3	C10	H10	O4	121.2	120.0
C3	C10	H10	C11	239.6	240.0
O4	C10	H10	C11	118.4	120.0
H10	C10	O4	HB	221.9	180.0
H10	C10	C11	N2	61.4	60.0
H10	C10	C11	H111	181.4	180.0
H10	C10	C11	H112	302.5	299.9
HB	O4	C10	C11	343.4	300.0
HB	O4	C10	H10	221.9	180.0
C10	C11	H111	N2	237.8	240.0
H111	C11	C10	H10	181.4	180.0
C10	C11	H111	H112	118.9	120.0
H111	C11	N2	C12	80.0	60.0
N2	C11	H111	H112	241.1	240.0
H111	C11	N2	HC	200.0	183.9
C10	C11	H112	N2	121.5	120.0
H112	C11	C10	H10	302.5	299.9
C10	C11	H112	H111	240.7	240.0
H112	C11	N2	C12	318.9	300.0
N2	C11	H112	H111	119.2	120.0
H112	C11	N2	HC	78.9	63.9
C11	N2	HC	C12	230.5	236.1
HC	N2	C11	H111	200.0	183.9
HC	N2	C11	H112	78.9	63.9
HC	N2	C12	C13	179.5	151.1
HC	N2	C12	C14	55.7	31.1
HC	N2	C12	H12	296.7	271.1
N2	C12	H12	C13	238.8	240.0
N2	C12	H12	C14	119.7	120.0
H12	C12	N2	HC	296.7	271.1
C13	C12	H12	C14	241.0	240.0
H12	C12	C13	H131	22.2	60.0
H12	C12	C13	H132	142.2	180.0
H12	C12	C13	H133	262.2	300.0
H12	C12	C14	C15	339.3	55.0
H12	C12	C14	H141	99.3	175.0
H12	C12	C14	H142	218.7	295.0
H131	C13	C12	C14	263.1	300.1
H131	C13	C12	H12	22.2	60.0
C12	C13	H131	H132	120.0	120.0
C12	C13	H131	H133	240.0	239.9
H132	C13	H131	H133	120.0	120.0
H132	C13	C12	C14	23.1	60.0
H132	C13	C12	H12	142.2	180.0
C12	C13	H132	H131	240.0	240.0
C12	C13	H132	H133	120.0	120.0
H131	C13	H132	H133	240.1	240.0
H133	C13	C12	C14	143.1	180.0
H133	C13	C12	H12	262.2	300.0
C12	C13	H133	H131	120.0	120.0
C12	C13	H133	H132	240.0	240.0
H131	C13	H133	H132	119.9	120.0
C12	C14	H141	C15	241.2	240.0
H141	C14	C12	H12	99.3	175.0
C12	C14	H141	H142	120.6	120.0
H141	C14	C15	C20	320.4	330.0
H141	C14	C15	C16	141.0	149.8
C15	C14	H141	H142	239.4	240.0
C12	C14	H142	C15	119.2	120.1
H142	C14	C12	H12	218.7	295.0
C12	C14	H142	H141	239.6	240.0
H142	C14	C15	C20	201.0	210.0
H142	C14	C15	C16	21.6	29.7
C15	C14	H142	H141	120.4	120.0
H20	C20	C15	C16	180.4	180.3
C15	C20	H20	C19	180.0	180.0
H20	C20	C19	C18	179.5	180.0
H20	C20	C19	H19	359.5	360.0
C15	C16	H16	C17	180.0	179.8
H16	C16	C17	H17	0.1	0.1
C20	C19	H19	C18	180.0	180.0
H19	C19	C20	H20	359.5	360.0
H19	C19	C18	O3	0.6	0.1
H19	C19	C18	C17	180.4	180.0
C18	C17	H17	C16	180.0	179.8
H17	C17	C16	H16	0.1	0.1
O3	C21	H211	H212	120.0	120.0
O3	C21	H211	H213	240.0	240.0
H212	C21	H211	H213	120.0	120.0
O3	C21	H212	H211	239.9	240.0
O3	C21	H212	H213	120.0	120.0
H211	C21	H212	H213	240.1	240.0
O3	C21	H213	H211	120.0	120.0
O3	C21	H213	H212	240.0	240.0
H211	C21	H213	H212	120.0	120.0