PDB Chemical Component W9T
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for W9T
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O1 |
C1 |
1.426 |
1.429 |
O14 |
C14 |
1.489 |
1.429 |
O3 |
C3 |
1.434 |
1.428 |
O13 |
C13 |
1.429 |
1.429 |
C3 |
C4 |
1.499 |
1.549 |
C3 |
C2 |
1.590 |
1.541 |
C1 |
C2 |
1.525 |
1.530 |
C12 |
O12 |
1.423 |
1.430 |
C12 |
C13 |
1.550 |
1.532 |
C12 |
C11 |
1.525 |
1.530 |
O4 |
C4 |
1.435 |
1.429 |
O4 |
C11 |
1.462 |
1.430 |
C14 |
C13 |
1.514 |
1.532 |
C14 |
C15 |
1.534 |
1.531 |
C4 |
C5 |
1.549 |
1.550 |
O15 |
C11 |
1.451 |
1.429 |
O15 |
C15 |
1.455 |
1.429 |
C2 |
O2 |
1.448 |
1.429 |
C2 |
O5 |
1.525 |
1.437 |
O6 |
C6 |
1.442 |
1.430 |
C5 |
O5 |
1.477 |
1.443 |
C5 |
C6 |
1.504 |
1.530 |
C15 |
C16 |
1.518 |
1.530 |
C16 |
O16 |
1.433 |
1.429 |
O16 |
H1 |
0.950 |
0.967 |
C16 |
H2 |
1.100 |
1.090 |
C16 |
H3 |
1.100 |
1.089 |
C15 |
H4 |
1.100 |
1.090 |
C14 |
H5 |
1.100 |
1.090 |
O14 |
H6 |
0.950 |
0.967 |
C13 |
H7 |
1.100 |
1.091 |
O13 |
H8 |
0.950 |
0.967 |
C12 |
H9 |
1.100 |
1.090 |
O12 |
H10 |
0.950 |
0.967 |
C11 |
H11 |
1.100 |
1.090 |
C4 |
H12 |
1.100 |
1.090 |
C5 |
H13 |
1.100 |
1.090 |
C6 |
H14 |
1.100 |
1.090 |
C6 |
H15 |
1.100 |
1.090 |
O6 |
H16 |
0.950 |
0.967 |
C3 |
H17 |
1.099 |
1.090 |
O3 |
H18 |
0.950 |
0.967 |
O2 |
H19 |
0.950 |
0.967 |
C1 |
H20 |
1.100 |
1.091 |
C1 |
H21 |
1.100 |
1.089 |
O1 |
H22 |
0.950 |
0.967 |
Bond Angles for W9T
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C1 |
H20 |
110.2 |
109.4 |
O1 |
C1 |
H21 |
110.2 |
109.5 |
O14 |
C14 |
H5 |
109.2 |
109.6 |
O3 |
C3 |
H17 |
111.7 |
110.5 |
O13 |
C13 |
H7 |
110.4 |
109.6 |
C3 |
C4 |
C5 |
95.0 |
102.1 |
C3 |
C4 |
H12 |
111.2 |
110.9 |
C4 |
C3 |
H17 |
110.7 |
110.5 |
C3 |
C2 |
O2 |
108.4 |
109.9 |
C3 |
C2 |
O5 |
104.8 |
107.3 |
C1 |
C2 |
O2 |
112.8 |
109.8 |
C1 |
C2 |
O5 |
105.1 |
110.0 |
C2 |
C1 |
H20 |
110.2 |
109.5 |
C2 |
C1 |
H21 |
110.2 |
109.5 |
C13 |
C12 |
O12 |
109.3 |
109.5 |
O12 |
C12 |
H9 |
110.4 |
109.5 |
C12 |
O12 |
H10 |
109.5 |
114.0 |
C12 |
C13 |
H7 |
108.8 |
109.5 |
C13 |
C12 |
H9 |
108.7 |
109.5 |
C12 |
C11 |
H11 |
107.9 |
109.5 |
O4 |
C4 |
H12 |
112.2 |
110.8 |
O4 |
C11 |
H11 |
108.6 |
109.5 |
C14 |
C13 |
H7 |
109.3 |
109.5 |
C14 |
C15 |
C16 |
109.7 |
109.5 |
C14 |
C15 |
H4 |
108.4 |
109.5 |
C15 |
C14 |
H5 |
108.7 |
109.5 |
C4 |
C5 |
O5 |
97.7 |
103.5 |
C4 |
C5 |
C6 |
110.6 |
110.6 |
C5 |
C4 |
H12 |
110.5 |
111.0 |
C4 |
C5 |
H13 |
108.0 |
110.6 |
O15 |
C11 |
H11 |
108.8 |
109.5 |
O15 |
C15 |
H4 |
109.4 |
109.5 |
O2 |
C2 |
O5 |
112.6 |
109.9 |
C2 |
O2 |
H19 |
109.5 |
114.0 |
C2 |
O5 |
C5 |
100.9 |
107.0 |
O6 |
C6 |
H14 |
110.3 |
109.5 |
O6 |
C6 |
H15 |
110.3 |
109.4 |
C6 |
C5 |
O5 |
122.0 |
110.6 |
O5 |
C5 |
H13 |
108.9 |
110.7 |
C6 |
C5 |
H13 |
108.6 |
110.7 |
C5 |
C6 |
H14 |
110.3 |
109.5 |
C5 |
C6 |
H15 |
110.3 |
109.5 |
C15 |
C16 |
O16 |
103.7 |
109.5 |
C15 |
C16 |
H2 |
110.9 |
109.5 |
C15 |
C16 |
H3 |
110.9 |
109.5 |
C16 |
C15 |
H4 |
108.6 |
109.5 |
C16 |
O16 |
H1 |
109.5 |
114.0 |
O16 |
C16 |
H2 |
110.9 |
109.4 |
O16 |
C16 |
H3 |
110.9 |
109.5 |
H2 |
C16 |
H3 |
109.5 |
109.5 |
H14 |
C6 |
H15 |
109.4 |
109.5 |
H20 |
C1 |
H21 |
109.5 |
109.4 |
Torsion Angles for W9T
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C1 |
C2 |
O2 |
88.7 |
301.0 |
O1 |
C1 |
C2 |
O5 |
211.7 |
62.1 |
C2 |
C1 |
O1 |
H20 |
240.4 |
120.0 |
C2 |
C1 |
O1 |
H21 |
119.6 |
240.0 |
H20 |
C1 |
O1 |
H21 |
239.1 |
119.9 |
O14 |
C14 |
C13 |
H7 |
174.7 |
177.2 |
O14 |
C14 |
C15 |
H4 |
178.9 |
182.3 |
C15 |
C14 |
O14 |
H5 |
120.9 |
120.2 |
O3 |
C3 |
C4 |
H12 |
58.8 |
21.3 |
C4 |
C3 |
O3 |
H17 |
124.8 |
122.6 |
O3 |
C3 |
C2 |
O5 |
216.5 |
243.3 |
C12 |
C13 |
O13 |
H7 |
240.6 |
239.8 |
O13 |
C13 |
C12 |
H9 |
309.3 |
303.1 |
C14 |
C13 |
O13 |
H7 |
120.0 |
120.1 |
O3 |
C3 |
C4 |
H17 |
234.6 |
237.3 |
C4 |
C3 |
C2 |
O2 |
95.5 |
121.5 |
C4 |
C3 |
C2 |
O5 |
335.0 |
2.0 |
O4 |
C4 |
C3 |
H12 |
233.9 |
236.4 |
C3 |
C4 |
C5 |
O5 |
294.2 |
323.0 |
C3 |
C4 |
C5 |
C6 |
165.8 |
204.5 |
C5 |
C4 |
C3 |
H12 |
114.3 |
118.2 |
C3 |
C4 |
C5 |
H13 |
47.1 |
81.5 |
C1 |
C2 |
C3 |
O2 |
125.6 |
121.0 |
C1 |
C2 |
C3 |
O5 |
246.1 |
240.5 |
C3 |
C2 |
C1 |
H20 |
205.9 |
300.0 |
C3 |
C2 |
C1 |
H21 |
85.0 |
60.0 |
O2 |
C2 |
C3 |
O5 |
120.5 |
119.5 |
C3 |
C2 |
O2 |
H19 |
180.0 |
180.0 |
C3 |
C2 |
O5 |
C5 |
344.9 |
333.5 |
O1 |
C1 |
C2 |
H20 |
119.6 |
240.0 |
O1 |
C1 |
C2 |
H21 |
240.5 |
120.0 |
C3 |
C2 |
C1 |
O2 |
236.8 |
239.0 |
C3 |
C2 |
C1 |
O5 |
113.7 |
117.9 |
O2 |
C2 |
C1 |
O5 |
236.9 |
238.9 |
C1 |
C2 |
O2 |
H19 |
54.3 |
59.0 |
C1 |
C2 |
O5 |
C5 |
104.1 |
92.9 |
H20 |
C1 |
C2 |
H21 |
120.9 |
240.0 |
O12 |
C12 |
C13 |
H7 |
309.5 |
302.9 |
C13 |
C12 |
O12 |
H9 |
240.5 |
240.0 |
O12 |
C12 |
C11 |
H11 |
48.9 |
57.5 |
O13 |
C13 |
C12 |
H7 |
120.4 |
120.3 |
O12 |
C12 |
C13 |
H9 |
120.6 |
120.0 |
C13 |
C12 |
O12 |
H10 |
180.0 |
180.0 |
C13 |
C12 |
C11 |
H11 |
288.9 |
297.6 |
C14 |
C13 |
C12 |
H7 |
240.0 |
240.2 |
O4 |
C11 |
C12 |
H11 |
243.6 |
240.0 |
O15 |
C11 |
C12 |
H11 |
118.9 |
120.0 |
C3 |
C4 |
O4 |
H12 |
125.5 |
123.6 |
O4 |
C4 |
C3 |
H17 |
58.1 |
20.4 |
O4 |
C4 |
C5 |
O5 |
177.6 |
204.8 |
C5 |
C4 |
O4 |
H12 |
232.4 |
236.3 |
O4 |
C4 |
C5 |
H13 |
290.4 |
323.4 |
C12 |
C11 |
O4 |
H11 |
115.9 |
120.0 |
C11 |
O4 |
C4 |
H12 |
4.4 |
32.3 |
O15 |
C11 |
O4 |
H11 |
238.4 |
240.0 |
O13 |
C13 |
C14 |
H7 |
239.3 |
239.8 |
C14 |
C13 |
C12 |
O12 |
189.5 |
183.1 |
C12 |
C13 |
C14 |
H7 |
119.7 |
119.8 |
C14 |
C13 |
C12 |
H9 |
68.9 |
63.0 |
O14 |
C14 |
C15 |
H5 |
238.8 |
239.8 |
C15 |
C14 |
C13 |
H7 |
297.6 |
297.1 |
O15 |
C15 |
C14 |
H4 |
240.6 |
240.0 |
C14 |
C15 |
C16 |
O16 |
174.0 |
184.9 |
C14 |
C15 |
C16 |
H2 |
293.1 |
65.0 |
C14 |
C15 |
C16 |
H3 |
54.9 |
305.0 |
C16 |
C15 |
C14 |
H4 |
118.5 |
120.0 |
C3 |
C4 |
C5 |
H12 |
245.2 |
241.8 |
C5 |
C4 |
C3 |
H17 |
298.5 |
262.2 |
O4 |
C4 |
C5 |
H12 |
128.5 |
123.7 |
C2 |
O5 |
C5 |
C4 |
48.4 |
40.1 |
C6 |
C5 |
C4 |
O5 |
231.5 |
241.5 |
O5 |
C5 |
C4 |
H13 |
247.2 |
241.5 |
C6 |
C5 |
C4 |
H13 |
118.7 |
123.0 |
C4 |
C5 |
C6 |
H14 |
157.4 |
305.0 |
C4 |
C5 |
C6 |
H15 |
36.4 |
65.1 |
C12 |
C11 |
O15 |
H11 |
241.6 |
240.0 |
O4 |
C11 |
O15 |
H11 |
121.5 |
120.0 |
C14 |
C15 |
O15 |
H4 |
118.8 |
120.0 |
O15 |
C15 |
C14 |
H5 |
180.7 |
182.5 |
C15 |
O15 |
C11 |
H11 |
64.6 |
58.8 |
O15 |
C15 |
C16 |
O16 |
52.7 |
65.0 |
O15 |
C15 |
C16 |
H2 |
171.8 |
305.0 |
O15 |
C15 |
C16 |
H3 |
293.6 |
185.0 |
C16 |
C15 |
O15 |
H4 |
240.1 |
240.0 |
C3 |
C2 |
O2 |
O5 |
244.5 |
242.1 |
C1 |
C2 |
O2 |
O5 |
118.8 |
121.1 |
O2 |
C2 |
C1 |
H20 |
329.1 |
61.0 |
O2 |
C2 |
C1 |
H21 |
208.2 |
181.0 |
O2 |
C2 |
O5 |
C5 |
227.3 |
214.0 |
C3 |
C2 |
O5 |
O2 |
117.6 |
119.5 |
C1 |
C2 |
O5 |
O2 |
236.9 |
238.9 |
O5 |
C2 |
C1 |
H20 |
92.2 |
182.1 |
O5 |
C2 |
C1 |
H21 |
331.3 |
302.1 |
C4 |
C5 |
O5 |
C2 |
48.4 |
40.1 |
O5 |
C2 |
O2 |
H19 |
295.6 |
297.9 |
C6 |
C5 |
O5 |
C2 |
168.5 |
158.5 |
C2 |
O5 |
C5 |
H13 |
296.2 |
281.6 |
O6 |
C6 |
C5 |
H13 |
35.3 |
307.9 |
C5 |
C6 |
O6 |
H14 |
240.5 |
120.0 |
C5 |
C6 |
O6 |
H15 |
119.5 |
240.0 |
H14 |
C6 |
O6 |
H15 |
239.0 |
120.0 |
C4 |
C5 |
O5 |
C6 |
239.9 |
241.6 |
O5 |
C5 |
C4 |
H12 |
49.1 |
81.2 |
C4 |
C5 |
O5 |
H13 |
112.1 |
118.5 |
C6 |
C5 |
O5 |
H13 |
232.2 |
237.0 |
O5 |
C5 |
C6 |
H14 |
43.7 |
191.0 |
O5 |
C5 |
C6 |
H15 |
282.7 |
311.0 |
C4 |
C5 |
C6 |
O5 |
113.7 |
114.0 |
C6 |
C5 |
C4 |
H12 |
280.6 |
322.7 |
C4 |
C5 |
C6 |
H13 |
241.6 |
237.1 |
C2 |
O5 |
C5 |
C6 |
168.5 |
158.5 |
O6 |
C6 |
C5 |
H14 |
119.5 |
240.0 |
O6 |
C6 |
C5 |
H15 |
240.5 |
119.9 |
O5 |
C5 |
C6 |
H13 |
127.9 |
123.0 |
H14 |
C6 |
C5 |
H15 |
121.0 |
240.0 |
C14 |
C15 |
C16 |
H4 |
241.7 |
240.0 |
C16 |
C15 |
C14 |
H5 |
58.6 |
62.5 |
O15 |
C15 |
C16 |
H4 |
120.4 |
120.1 |
C15 |
C16 |
O16 |
H1 |
180.0 |
179.9 |
O16 |
C16 |
C15 |
H2 |
240.9 |
119.9 |
O16 |
C16 |
C15 |
H3 |
119.0 |
239.9 |
H2 |
C16 |
C15 |
H3 |
238.1 |
120.0 |
C15 |
C16 |
O16 |
H2 |
119.1 |
240.0 |
C15 |
C16 |
O16 |
H3 |
241.0 |
120.1 |
O16 |
C16 |
C15 |
H4 |
292.3 |
304.9 |
H2 |
C16 |
O16 |
H3 |
121.9 |
240.0 |
H1 |
O16 |
C16 |
H2 |
60.9 |
299.9 |
H1 |
O16 |
C16 |
H3 |
299.0 |
59.9 |
C15 |
C16 |
H2 |
O16 |
245.4 |
120.0 |
C15 |
C16 |
H2 |
H3 |
122.7 |
240.0 |
H2 |
C16 |
C15 |
H4 |
51.4 |
185.0 |
H2 |
C16 |
O16 |
H1 |
60.9 |
299.9 |
O16 |
C16 |
H2 |
H3 |
237.3 |
120.0 |
C15 |
C16 |
H3 |
O16 |
114.6 |
240.0 |
C15 |
C16 |
H3 |
H2 |
237.3 |
120.0 |
H3 |
C16 |
C15 |
H4 |
173.2 |
65.0 |
H3 |
C16 |
O16 |
H1 |
299.0 |
59.9 |
O16 |
C16 |
H3 |
H2 |
122.7 |
240.0 |
C14 |
C15 |
H4 |
C16 |
119.1 |
120.0 |
H4 |
C15 |
C14 |
H5 |
300.1 |
302.5 |
H4 |
C15 |
C16 |
O16 |
292.3 |
304.9 |
H4 |
C15 |
C16 |
H2 |
51.4 |
185.0 |
H4 |
C15 |
C16 |
H3 |
173.2 |
65.0 |
H5 |
C14 |
C13 |
H7 |
55.3 |
57.0 |
H5 |
C14 |
C15 |
C16 |
58.6 |
62.5 |
H5 |
C14 |
C15 |
H4 |
300.1 |
302.5 |
H6 |
O14 |
C14 |
H5 |
299.2 |
60.1 |
H7 |
C13 |
C12 |
O12 |
309.5 |
302.9 |
H7 |
C13 |
C12 |
H9 |
188.9 |
182.9 |
H8 |
O13 |
C13 |
H7 |
299.4 |
59.9 |
C13 |
C12 |
H9 |
O12 |
119.8 |
120.0 |
H9 |
C12 |
O12 |
H10 |
299.5 |
300.1 |
H9 |
C12 |
C13 |
H7 |
188.9 |
182.9 |
H9 |
C12 |
C11 |
H11 |
168.2 |
177.7 |
H10 |
O12 |
C12 |
H9 |
299.5 |
300.1 |
C3 |
C4 |
H12 |
C5 |
104.2 |
112.7 |
H12 |
C4 |
C3 |
H17 |
184.2 |
144.0 |
H12 |
C4 |
C5 |
O5 |
49.1 |
81.2 |
H12 |
C4 |
C5 |
C6 |
280.6 |
322.7 |
H12 |
C4 |
C5 |
H13 |
161.9 |
199.7 |
C4 |
C5 |
H13 |
O5 |
254.9 |
245.9 |
C4 |
C5 |
H13 |
C6 |
119.9 |
122.9 |
H13 |
C5 |
C4 |
H12 |
161.9 |
199.7 |
C6 |
C5 |
H13 |
O5 |
135.0 |
123.0 |
H13 |
C5 |
C6 |
H14 |
275.7 |
67.9 |
H13 |
C5 |
C6 |
H15 |
154.8 |
188.0 |
O6 |
C6 |
H14 |
H15 |
121.5 |
240.0 |
H14 |
C6 |
C5 |
O5 |
43.7 |
191.0 |
H14 |
C6 |
C5 |
H13 |
275.7 |
67.9 |
C5 |
C6 |
H14 |
H15 |
238.5 |
120.0 |
O6 |
C6 |
H15 |
H14 |
238.5 |
120.0 |
H15 |
C6 |
C5 |
O5 |
282.7 |
311.0 |
H15 |
C6 |
C5 |
H13 |
154.8 |
188.0 |
C5 |
C6 |
H15 |
H14 |
121.5 |
239.9 |
H16 |
O6 |
C6 |
H14 |
299.5 |
60.0 |
H16 |
O6 |
C6 |
H15 |
60.5 |
300.0 |
H17 |
C3 |
C4 |
C5 |
298.5 |
262.2 |
H17 |
C3 |
C4 |
H12 |
184.2 |
144.0 |
H17 |
C3 |
C2 |
O2 |
210.9 |
240.2 |
H17 |
C3 |
C2 |
O5 |
90.4 |
120.7 |
H18 |
O3 |
C3 |
H17 |
55.2 |
57.4 |
H19 |
O2 |
C2 |
O5 |
295.6 |
297.9 |
O1 |
C1 |
H20 |
H21 |
121.3 |
240.0 |
H20 |
C1 |
C2 |
O2 |
329.1 |
61.0 |
H20 |
C1 |
C2 |
O5 |
92.2 |
182.1 |
C2 |
C1 |
H20 |
H21 |
238.7 |
120.0 |
O1 |
C1 |
H21 |
H20 |
238.7 |
119.9 |
H21 |
C1 |
C2 |
O2 |
208.2 |
181.0 |
H21 |
C1 |
C2 |
O5 |
331.3 |
302.1 |
C2 |
C1 |
H21 |
H20 |
121.3 |
240.0 |
H22 |
O1 |
C1 |
H20 |
299.6 |
60.0 |
H22 |
O1 |
C1 |
H21 |
60.4 |
300.0 |