PDB Chemical Component W5G
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for W5G
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C04 |
C05 |
1.462 |
1.533 |
| C04 |
C03 |
1.476 |
1.532 |
| C05 |
C06 |
1.553 |
1.530 |
| C01 |
C03 |
1.546 |
1.528 |
| C01 |
C02 |
1.514 |
1.530 |
| C03 |
C08 |
1.531 |
1.532 |
| C03 |
C02 |
1.555 |
1.528 |
| C06 |
N07 |
1.546 |
1.467 |
| C08 |
N07 |
1.505 |
1.471 |
| N07 |
C09 |
1.461 |
1.383 |
| C09 |
C17 |
1.414 |
1.403 |
| C09 |
N10 |
1.331 |
1.330 |
| C16 |
C17 |
1.403 |
1.462 |
| C16 |
C15 |
1.367 |
1.343 |
| C17 |
C13 |
1.354 |
1.407 |
| N10 |
C11 |
1.328 |
1.320 |
| C15 |
N14 |
1.330 |
1.371 |
| C13 |
N14 |
1.366 |
1.367 |
| C13 |
N12 |
1.351 |
1.332 |
| C11 |
N12 |
1.318 |
1.316 |
| C15 |
H151 |
1.080 |
1.080 |
| C01 |
H011 |
1.100 |
1.089 |
| C01 |
H012 |
1.100 |
1.091 |
| C02 |
H021 |
1.100 |
1.090 |
| C02 |
H022 |
1.100 |
1.090 |
| C04 |
H042 |
1.100 |
1.091 |
| C04 |
H041 |
1.100 |
1.089 |
| C05 |
H052 |
1.100 |
1.090 |
| C05 |
H051 |
1.100 |
1.091 |
| C06 |
H061 |
1.100 |
1.090 |
| C06 |
H062 |
1.100 |
1.090 |
| C08 |
H082 |
1.099 |
1.090 |
| C08 |
H081 |
1.099 |
1.089 |
| C11 |
H111 |
1.080 |
1.079 |
| C16 |
H161 |
1.080 |
1.079 |
| N14 |
H141 |
1.000 |
0.970 |
Bond Angles for W5G
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C04 |
C05 |
C06 |
116.9 |
109.2 |
| C05 |
C04 |
H042 |
107.0 |
109.6 |
| C05 |
C04 |
H041 |
107.0 |
109.7 |
| C04 |
C05 |
H052 |
107.6 |
109.5 |
| C04 |
C05 |
H051 |
107.6 |
109.5 |
| C04 |
C03 |
C08 |
112.3 |
114.8 |
| C05 |
C06 |
N07 |
118.0 |
109.9 |
| C06 |
C05 |
H052 |
107.6 |
109.5 |
| C06 |
C05 |
H051 |
107.6 |
109.5 |
| C05 |
C06 |
H061 |
107.3 |
109.4 |
| C05 |
C06 |
H062 |
107.3 |
109.4 |
| C02 |
C01 |
C03 |
61.1 |
59.9 |
| C01 |
C03 |
C08 |
120.4 |
117.8 |
| C01 |
C03 |
C02 |
58.4 |
60.1 |
| C03 |
C01 |
H011 |
119.8 |
117.5 |
| C03 |
C01 |
H012 |
119.8 |
117.5 |
| C02 |
C01 |
H011 |
119.8 |
117.5 |
| C02 |
C01 |
H012 |
119.8 |
117.5 |
| C01 |
C02 |
H021 |
119.9 |
117.5 |
| C01 |
C02 |
H022 |
119.9 |
117.5 |
| C03 |
C08 |
N07 |
111.3 |
108.9 |
| C03 |
C08 |
H082 |
109.0 |
109.5 |
| C03 |
C08 |
H081 |
109.0 |
109.6 |
| C03 |
C02 |
H021 |
119.9 |
117.5 |
| C03 |
C02 |
H022 |
119.9 |
117.5 |
| C06 |
N07 |
C08 |
113.1 |
111.2 |
| C06 |
N07 |
C09 |
122.8 |
111.0 |
| N07 |
C06 |
H061 |
107.3 |
109.4 |
| N07 |
C06 |
H062 |
107.3 |
109.4 |
| C08 |
N07 |
C09 |
121.0 |
111.0 |
| N07 |
C08 |
H082 |
109.0 |
109.5 |
| N07 |
C08 |
H081 |
109.0 |
109.6 |
| N07 |
C09 |
N10 |
125.5 |
120.9 |
| C09 |
N10 |
C11 |
121.5 |
121.1 |
| C16 |
C15 |
N14 |
107.3 |
109.8 |
| C16 |
C15 |
H151 |
126.4 |
125.1 |
| C17 |
C13 |
N14 |
105.4 |
107.2 |
| N10 |
C11 |
H111 |
119.2 |
118.7 |
| C13 |
N14 |
C15 |
111.8 |
110.0 |
| N14 |
C15 |
H151 |
126.3 |
125.1 |
| C15 |
N14 |
H141 |
124.1 |
125.0 |
| C13 |
N14 |
H141 |
124.1 |
125.0 |
| H011 |
C01 |
H012 |
109.4 |
115.5 |
| H021 |
C02 |
H022 |
109.5 |
115.5 |
| H042 |
C04 |
H041 |
109.5 |
109.7 |
| H052 |
C05 |
H051 |
109.5 |
109.5 |
| H061 |
C06 |
H062 |
109.5 |
109.3 |
| H082 |
C08 |
H081 |
109.5 |
109.7 |
Torsion Angles for W5G
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C05 |
C04 |
C03 |
C08 |
315.1 |
51.5 |
| C04 |
C05 |
C06 |
N07 |
343.5 |
62.3 |
| C06 |
C05 |
C04 |
H052 |
238.9 |
240.1 |
| C06 |
C05 |
C04 |
H051 |
121.1 |
119.9 |
| C04 |
C05 |
C06 |
H061 |
104.8 |
182.4 |
| C04 |
C05 |
C06 |
H062 |
222.3 |
302.1 |
| H042 |
C04 |
C05 |
H041 |
242.7 |
120.5 |
| H052 |
C05 |
C04 |
H051 |
242.1 |
239.9 |
| C01 |
C03 |
C04 |
C08 |
215.9 |
214.6 |
| C04 |
C03 |
C01 |
H011 |
358.2 |
144.7 |
| C04 |
C03 |
C01 |
H012 |
138.6 |
359.7 |
| C04 |
C03 |
C08 |
N07 |
58.6 |
307.3 |
| C04 |
C03 |
C08 |
H082 |
178.8 |
67.0 |
| C04 |
C03 |
C08 |
H081 |
298.3 |
187.4 |
| C04 |
C03 |
C02 |
H021 |
354.0 |
0.2 |
| C04 |
C03 |
C02 |
H022 |
213.2 |
215.2 |
| C06 |
C05 |
C04 |
H042 |
145.2 |
186.0 |
| C06 |
C05 |
C04 |
H041 |
262.5 |
65.5 |
| C04 |
C05 |
C06 |
H052 |
121.1 |
119.9 |
| C04 |
C05 |
C06 |
H051 |
238.9 |
240.1 |
| C05 |
C06 |
N07 |
C08 |
31.0 |
295.2 |
| C05 |
C06 |
N07 |
C09 |
230.9 |
171.1 |
| N07 |
C06 |
C05 |
H061 |
238.8 |
239.8 |
| N07 |
C06 |
C05 |
H062 |
121.2 |
120.1 |
| H052 |
C05 |
C06 |
H051 |
117.8 |
120.1 |
| H061 |
C06 |
C05 |
H062 |
242.4 |
240.3 |
| C04 |
C03 |
C01 |
C08 |
141.1 |
144.4 |
| C02 |
C01 |
C03 |
H011 |
250.2 |
107.5 |
| C02 |
C01 |
C03 |
H012 |
109.8 |
252.5 |
| C03 |
C01 |
C02 |
H021 |
109.6 |
107.5 |
| C03 |
C01 |
C02 |
H022 |
250.4 |
252.5 |
| C01 |
C03 |
C08 |
N07 |
201.0 |
92.7 |
| C01 |
C03 |
C08 |
H082 |
321.3 |
212.5 |
| C01 |
C03 |
C08 |
H081 |
80.8 |
332.9 |
| C01 |
C03 |
C02 |
H021 |
250.4 |
252.5 |
| C01 |
C03 |
C02 |
H022 |
109.6 |
107.5 |
| H011 |
C01 |
C03 |
H012 |
219.5 |
145.0 |
| C02 |
C01 |
C03 |
C08 |
107.3 |
107.8 |
| C02 |
C01 |
C03 |
C02 |
-0.0 |
-0.0 |
| C03 |
C01 |
C02 |
H011 |
109.8 |
252.5 |
| C03 |
C01 |
C02 |
H012 |
250.2 |
107.4 |
| C03 |
C02 |
C01 |
H021 |
250.4 |
252.5 |
| C03 |
C02 |
C01 |
H022 |
109.6 |
107.5 |
| H011 |
C01 |
C02 |
H012 |
140.5 |
214.9 |
| H021 |
C02 |
C01 |
H022 |
219.2 |
215.0 |
| C01 |
C03 |
C08 |
C02 |
291.7 |
291.1 |
| C08 |
C03 |
C01 |
H011 |
217.1 |
0.3 |
| C08 |
C03 |
C01 |
H012 |
357.5 |
215.3 |
| C08 |
C03 |
C02 |
H021 |
140.6 |
144.8 |
| C08 |
C03 |
C02 |
H022 |
359.8 |
359.8 |
| C06 |
N07 |
C08 |
C03 |
308.7 |
58.0 |
| C03 |
C08 |
N07 |
C09 |
109.2 |
182.2 |
| N07 |
C08 |
C03 |
H082 |
239.7 |
240.2 |
| N07 |
C08 |
C03 |
H081 |
120.2 |
119.8 |
| H082 |
C08 |
C03 |
H081 |
240.5 |
239.6 |
| C01 |
C03 |
C02 |
C08 |
109.8 |
107.7 |
| C02 |
C03 |
C01 |
H011 |
109.8 |
252.5 |
| C02 |
C03 |
C01 |
H012 |
250.2 |
107.5 |
| C03 |
C02 |
C01 |
H011 |
250.2 |
107.5 |
| C03 |
C02 |
C01 |
H012 |
109.8 |
252.6 |
| C01 |
C02 |
C03 |
H021 |
109.6 |
107.5 |
| C01 |
C02 |
C03 |
H022 |
250.4 |
252.5 |
| H021 |
C02 |
C03 |
H022 |
140.8 |
145.0 |
| N07 |
C06 |
C05 |
H052 |
222.5 |
302.3 |
| N07 |
C06 |
C05 |
H051 |
104.6 |
182.2 |
| C05 |
C06 |
N07 |
H061 |
121.2 |
120.1 |
| C05 |
C06 |
N07 |
H062 |
238.8 |
239.9 |
| C03 |
C08 |
N07 |
C06 |
308.7 |
58.0 |
| C08 |
N07 |
C06 |
C09 |
160.1 |
124.1 |
| C06 |
N07 |
C08 |
H082 |
188.5 |
298.3 |
| C06 |
N07 |
C08 |
H081 |
69.0 |
177.9 |
| C06 |
N07 |
C09 |
N10 |
146.9 |
124.0 |
| H061 |
C06 |
N07 |
H062 |
117.6 |
119.8 |
| C03 |
C08 |
N07 |
H082 |
120.3 |
119.8 |
| C03 |
C08 |
N07 |
H081 |
239.7 |
240.1 |
| C06 |
N07 |
C08 |
C09 |
199.5 |
235.9 |
| C08 |
N07 |
C06 |
H061 |
269.8 |
175.1 |
| C08 |
N07 |
C06 |
H062 |
152.2 |
55.3 |
| C08 |
N07 |
C09 |
N10 |
348.4 |
359.8 |
| H082 |
C08 |
N07 |
H081 |
119.5 |
120.4 |
| C06 |
N07 |
C09 |
C08 |
158.5 |
124.2 |
| C09 |
N07 |
C06 |
H061 |
109.7 |
51.0 |
| C09 |
N07 |
C06 |
H062 |
352.2 |
291.2 |
| C09 |
N07 |
C08 |
H082 |
348.9 |
62.4 |
| C09 |
N07 |
C08 |
H081 |
229.5 |
302.0 |
| N07 |
C09 |
N10 |
C11 |
181.3 |
180.0 |
| C09 |
C17 |
C13 |
N14 |
179.3 |
180.0 |
| C09 |
N10 |
C11 |
H111 |
178.4 |
179.9 |
| C17 |
C16 |
C15 |
N14 |
359.6 |
0.0 |
| C17 |
C16 |
C15 |
H151 |
179.7 |
179.9 |
| C16 |
C17 |
C13 |
N14 |
360.0 |
0.0 |
| C13 |
N14 |
C15 |
C16 |
0.4 |
0.0 |
| N14 |
C15 |
C16 |
H151 |
180.0 |
180.1 |
| C16 |
C15 |
N14 |
H141 |
180.3 |
180.0 |
| C17 |
C13 |
N14 |
C15 |
359.8 |
360.0 |
| C17 |
C13 |
N14 |
H141 |
179.8 |
180.0 |
| C16 |
C15 |
N14 |
H151 |
180.0 |
179.9 |
| C13 |
N14 |
C15 |
H141 |
180.0 |
180.1 |
| C16 |
C15 |
N14 |
C13 |
0.4 |
0.0 |
| C13 |
N14 |
C15 |
H151 |
180.3 |
180.1 |
| C15 |
N14 |
C13 |
H141 |
180.0 |
179.9 |
| C16 |
C15 |
H151 |
N14 |
180.0 |
180.1 |
| H151 |
C15 |
N14 |
H141 |
0.3 |
0.1 |
| C02 |
C01 |
H011 |
C03 |
71.7 |
291.4 |
| H011 |
C01 |
C03 |
C08 |
217.1 |
0.3 |
| H011 |
C01 |
C03 |
C02 |
109.8 |
252.5 |
| C03 |
C01 |
H011 |
H012 |
144.1 |
214.3 |
| C02 |
C01 |
H011 |
H012 |
215.8 |
145.8 |
| H011 |
C01 |
C02 |
H021 |
359.8 |
214.9 |
| H011 |
C01 |
C02 |
H022 |
140.6 |
360.0 |
| C02 |
C01 |
H012 |
C03 |
288.3 |
68.6 |
| H012 |
C01 |
C03 |
C08 |
357.5 |
215.3 |
| H012 |
C01 |
C03 |
C02 |
250.2 |
107.5 |
| C03 |
C01 |
H012 |
H011 |
215.9 |
145.7 |
| C02 |
C01 |
H012 |
H011 |
144.2 |
214.2 |
| H012 |
C01 |
C02 |
H021 |
219.3 |
0.0 |
| H012 |
C01 |
C02 |
H022 |
0.2 |
145.1 |
| H021 |
C02 |
C01 |
C03 |
109.6 |
107.5 |
| H021 |
C02 |
C01 |
H011 |
359.8 |
214.9 |
| H021 |
C02 |
C01 |
H012 |
219.3 |
0.0 |
| C01 |
C02 |
H021 |
H022 |
144.5 |
145.7 |
| C03 |
C02 |
H021 |
H022 |
215.5 |
214.3 |
| H022 |
C02 |
C01 |
C03 |
250.4 |
252.5 |
| H022 |
C02 |
C01 |
H011 |
140.6 |
360.0 |
| H022 |
C02 |
C01 |
H012 |
0.2 |
145.1 |
| C01 |
C02 |
H022 |
H021 |
215.5 |
214.3 |
| C03 |
C02 |
H022 |
H021 |
144.5 |
145.7 |
| H042 |
C04 |
C05 |
C06 |
145.2 |
186.0 |
| C05 |
C04 |
H042 |
H041 |
115.6 |
239.5 |
| H042 |
C04 |
C05 |
H052 |
266.3 |
305.9 |
| H042 |
C04 |
C05 |
H051 |
24.2 |
66.1 |
| H042 |
C04 |
C03 |
C08 |
193.7 |
171.2 |
| H041 |
C04 |
C05 |
C06 |
262.5 |
65.5 |
| C05 |
C04 |
H041 |
H042 |
244.4 |
120.5 |
| H041 |
C04 |
C05 |
H052 |
23.5 |
185.4 |
| H041 |
C04 |
C05 |
H051 |
141.4 |
305.5 |
| H041 |
C04 |
C03 |
C08 |
76.4 |
291.8 |
| C04 |
C05 |
H052 |
C06 |
233.3 |
240.3 |
| H052 |
C05 |
C04 |
H042 |
266.3 |
305.9 |
| H052 |
C05 |
C04 |
H041 |
23.5 |
185.4 |
| C04 |
C05 |
H052 |
H051 |
116.7 |
120.1 |
| H052 |
C05 |
C06 |
N07 |
222.5 |
302.3 |
| C06 |
C05 |
H052 |
H051 |
243.4 |
239.8 |
| H052 |
C05 |
C06 |
H061 |
343.7 |
62.5 |
| H052 |
C05 |
C06 |
H062 |
101.2 |
182.2 |
| C04 |
C05 |
H051 |
C06 |
126.7 |
119.7 |
| H051 |
C05 |
C04 |
H042 |
24.2 |
66.1 |
| H051 |
C05 |
C04 |
H041 |
141.4 |
305.5 |
| C04 |
C05 |
H051 |
H052 |
243.3 |
239.8 |
| H051 |
C05 |
C06 |
N07 |
104.6 |
182.2 |
| C06 |
C05 |
H051 |
H052 |
116.6 |
120.1 |
| H051 |
C05 |
C06 |
H061 |
225.8 |
302.4 |
| H051 |
C05 |
C06 |
H062 |
343.4 |
62.1 |
| C05 |
C06 |
H061 |
N07 |
232.3 |
239.5 |
| H061 |
C06 |
C05 |
H052 |
343.7 |
62.5 |
| H061 |
C06 |
C05 |
H051 |
225.8 |
302.4 |
| C05 |
C06 |
H061 |
H062 |
116.1 |
119.7 |
| H061 |
C06 |
N07 |
C08 |
269.8 |
175.1 |
| H061 |
C06 |
N07 |
C09 |
109.7 |
51.0 |
| N07 |
C06 |
H061 |
H062 |
243.9 |
240.2 |
| C05 |
C06 |
H062 |
N07 |
127.7 |
120.4 |
| H062 |
C06 |
C05 |
H052 |
101.2 |
182.2 |
| H062 |
C06 |
C05 |
H051 |
343.4 |
62.1 |
| C05 |
C06 |
H062 |
H061 |
243.9 |
240.2 |
| H062 |
C06 |
N07 |
C08 |
152.2 |
55.3 |
| H062 |
C06 |
N07 |
C09 |
352.2 |
291.2 |
| N07 |
C06 |
H062 |
H061 |
116.1 |
119.8 |
| C03 |
C08 |
H082 |
N07 |
238.3 |
240.6 |
| C03 |
C08 |
H082 |
H081 |
119.2 |
120.3 |
| H082 |
C08 |
N07 |
C09 |
348.9 |
62.4 |
| N07 |
C08 |
H082 |
H081 |
240.8 |
239.7 |
| C03 |
C08 |
H081 |
N07 |
121.6 |
119.4 |
| C03 |
C08 |
H081 |
H082 |
240.8 |
239.7 |
| H081 |
C08 |
N07 |
C09 |
229.5 |
302.0 |
| N07 |
C08 |
H081 |
H082 |
119.2 |
120.3 |
| H161 |
C16 |
C15 |
N14 |
179.6 |
180.0 |
| H161 |
C16 |
C15 |
H151 |
359.7 |
359.9 |
| C13 |
N14 |
H141 |
C15 |
180.0 |
179.9 |
| H141 |
N14 |
C15 |
H151 |
0.3 |
0.1 |