PDB Chemical Component W11

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for W11

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O1 N2 1.530 1.210
O1 C5 1.409 1.341
N2 C3 1.336 1.302
C3 CM3 1.509 1.507
C3 C4 1.438 1.413
CM3 HM31 1.116 1.090
CM3 HM32 1.115 1.089
CM3 HM33 1.115 1.090
C4 C5 1.386 1.354
C4 H41 1.104 1.080
C5 C1C 1.489 1.507
C1C C2C 1.516 1.529
C1C H1C1 1.115 1.090
C1C H1C2 1.115 1.089
C2C C3C 1.507 1.530
C2C H2C1 1.115 1.089
C2C H2C2 1.114 1.090
C3C O1B 1.375 1.429
C3C H3C1 1.116 1.088
C3C H3C2 1.114 1.089
O1B C1B 1.420 1.358
C1B C2B 1.416 1.389
C1B C6B 1.477 1.388
C2B CM2 1.463 1.507
C2B C3B 1.374 1.378
CM2 HM21 1.115 1.091
CM2 HM22 1.115 1.089
CM2 HM23 1.115 1.089
C3B C4B 1.404 1.393
C3B H3B 1.103 1.080
C4B C5B 1.429 1.393
C4B C2A 1.422 1.483
C5B C6B 1.426 1.379
C5B H5B 1.103 1.080
C6B CM6 1.567 1.507
CM6 HM61 1.114 1.090
CM6 HM62 1.115 1.090
CM6 HM63 1.116 1.090
C2A N1A 1.392 1.308
C2A N3A 1.435 1.351
N1A O1A 1.577 1.214
N3A C3A 1.432 1.310
C3A CM4 1.542 1.507
C3A O1A 1.419 1.337
CM4 F1 1.406 1.399
CM4 F2 1.346 1.398
CM4 F3 1.347 1.399

Bond Angles for W11

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
N2 O1 C5 104.6 111.5
O1 N2 C3 107.6 111.6
O1 C5 C4 109.8 106.4
O1 C5 C1C 113.1 126.7
N2 C3 CM3 117.8 126.8
N2 C3 C4 109.7 106.3
CM3 C3 C4 132.5 126.9
C3 CM3 HM31 117.8 109.4
C3 CM3 HM32 109.2 109.5
C3 CM3 HM33 109.2 109.4
C3 C4 C5 108.4 104.1
C3 C4 H41 127.3 128.0
HM31 CM3 HM32 109.2 109.5
HM31 CM3 HM33 109.2 109.5
HM32 CM3 HM33 100.9 109.5
C5 C4 H41 124.4 127.9
C4 C5 C1C 137.0 126.8
C5 C1C C2C 103.8 109.5
C5 C1C H1C1 114.3 109.5
C5 C1C H1C2 114.4 109.5
C2C C1C H1C1 114.4 109.5
C2C C1C H1C2 114.4 109.5
C1C C2C C3C 110.5 109.5
C1C C2C H2C1 111.8 109.5
C1C C2C H2C2 111.8 109.5
H1C1 C1C H1C2 96.1 109.4
C3C C2C H2C1 111.8 109.6
C3C C2C H2C2 111.8 109.4
C2C C3C O1B 95.5 109.5
C2C C3C H3C1 117.7 109.6
C2C C3C H3C2 117.7 109.4
H2C1 C2C H2C2 98.7 109.5
O1B C3C H3C1 117.7 109.4
O1B C3C H3C2 117.7 109.4
C3C O1B C1B 121.8 106.8
H3C1 C3C H3C2 92.6 109.5
O1B C1B C2B 114.9 120.0
O1B C1B C6B 127.6 119.9
C2B C1B C6B 117.5 120.1
C1B C2B CM2 117.1 119.9
C1B C2B C3B 125.5 120.1
C1B C6B C5B 119.2 120.1
C1B C6B CM6 127.3 120.0
CM2 C2B C3B 117.4 120.0
C2B CM2 HM21 117.1 109.5
C2B CM2 HM22 109.4 109.5
C2B CM2 HM23 109.5 109.5
C2B C3B C4B 114.9 119.9
C2B C3B H3B 121.6 120.0
HM21 CM2 HM22 109.5 109.4
HM21 CM2 HM23 109.5 109.4
HM22 CM2 HM23 100.6 109.5
C4B C3B H3B 123.5 120.0
C3B C4B C5B 126.2 119.9
C3B C4B C2A 115.0 120.1
C5B C4B C2A 118.4 120.0
C4B C5B C6B 116.7 119.9
C4B C5B H5B 121.8 120.1
C4B C2A N1A 119.9 126.4
C4B C2A N3A 122.1 126.5
C6B C5B H5B 121.5 120.0
C5B C6B CM6 113.4 119.9
C6B CM6 HM61 127.3 109.5
C6B CM6 HM62 106.0 109.4
C6B CM6 HM63 105.9 109.5
HM61 CM6 HM62 106.0 109.5
HM61 CM6 HM63 106.0 109.5
HM62 CM6 HM63 103.4 109.5
N1A C2A N3A 117.8 107.1
C2A N1A O1A 103.8 110.1
C2A N3A C3A 98.8 105.7
N1A O1A C3A 100.9 110.0
N3A C3A CM4 126.1 126.5
N3A C3A O1A 118.7 107.1
CM4 C3A O1A 115.0 126.4
C3A CM4 F1 107.0 109.5
C3A CM4 F2 106.6 109.5
C3A CM4 F3 112.9 109.4
F1 CM4 F2 112.3 109.5
F1 CM4 F3 110.2 109.5
F2 CM4 F3 107.8 109.5

Torsion Angles for W11

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
N2 O1 C5 C4 0.3 359.7
N2 O1 C5 C1C 184.2 179.7
O1 N2 C3 CM3 181.2 179.8
O1 N2 C3 C4 0.2 359.5
C5 O1 N2 C3 359.7 0.5
C3 C4 C5 O1 359.8 0.0
O1 C5 C4 H41 179.9 180.0
C4 C5 O1 C1C 176.0 179.9
O1 C5 C1C C2C 309.1 269.9
O1 C5 C1C H1C1 74.4 30.0
O1 C5 C1C H1C2 183.8 149.9
C3 N2 O1 C5 359.7 0.5
CM3 C3 N2 C4 181.0 180.3
N2 C3 CM3 HM31 180.0 269.7
N2 C3 CM3 HM32 305.2 29.6
N2 C3 CM3 HM33 54.7 149.7
N2 C3 C4 C5 360.0 0.3
N2 C3 C4 H41 179.9 180.3
N2 C3 CM3 C4 178.7 179.6
CM3 C3 C4 C5 178.7 179.9
CM3 C3 C4 H41 358.7 359.9
HM31 CM3 C3 HM32 234.8 240.0
HM31 CM3 C3 HM33 125.3 120.0
HM32 CM3 C3 HM33 250.5 239.9
O1 C5 C4 C3 359.8 0.0
N2 C3 C4 CM3 181.2 180.3
C4 C3 CM3 HM31 1.3 90.0
C4 C3 CM3 HM32 126.6 210.0
C4 C3 CM3 HM33 236.0 330.1
C5 C4 C3 H41 180.0 180.0
C3 C4 C5 C1C 174.5 180.0
HM31 CM3 C3 C4 1.3 90.0
C3 CM3 HM31 HM32 125.2 120.0
C3 CM3 HM31 HM33 234.7 240.1
HM32 CM3 HM31 HM33 109.5 120.1
HM32 CM3 C3 C4 126.6 210.0
C3 CM3 HM32 HM31 229.9 240.1
C3 CM3 HM32 HM33 115.0 120.0
HM31 CM3 HM32 HM33 245.0 240.0
HM33 CM3 C3 C4 236.0 330.1
C3 CM3 HM33 HM31 130.1 119.9
C3 CM3 HM33 HM32 245.0 239.9
HM31 CM3 HM33 HM32 114.9 120.0
O1 C5 C4 C1C 185.4 180.1
C3 C4 C5 H41 180.0 180.0
C4 C5 C1C C2C 134.6 90.0
C4 C5 C1C H1C1 259.9 210.0
C4 C5 C1C H1C2 9.3 330.0
C3 C4 H41 C5 180.0 180.0
H41 C4 C5 C1C 354.5 360.0
O1 C5 C1C C4 174.5 179.9
C1C C5 C4 H41 354.5 360.0
C2C C1C C5 H1C1 234.7 240.0
C2C C1C C5 H1C2 125.3 120.0
C5 C1C C2C C3C 173.0 180.0
C5 C1C C2C H2C1 298.2 300.1
C5 C1C C2C H2C2 47.8 60.1
H1C1 C1C C5 H1C2 250.6 240.0
C5 C1C C2C H1C1 125.3 120.0
C5 C1C C2C H1C2 234.7 240.0
H1C1 C1C C2C H1C2 109.5 120.0
C3C C2C C1C H2C1 234.7 239.9
C3C C2C C1C H2C2 125.2 119.9
C1C C2C C3C O1B 230.9 180.0
C1C C2C C3C H3C1 356.2 300.0
C1C C2C C3C H3C2 105.7 60.1
H2C1 C2C C1C H2C2 250.5 240.0
C5 C1C H1C1 C2C 240.5 240.0
C5 C1C H1C1 H1C2 120.2 120.0
C2C C1C H1C1 H1C2 239.7 240.0
H1C1 C1C C2C C3C 47.7 59.9
H1C1 C1C C2C H2C1 173.0 180.0
H1C1 C1C C2C H2C2 282.5 300.0
C5 C1C H1C2 C2C 119.5 120.0
C5 C1C H1C2 H1C1 239.8 240.0
C2C C1C H1C2 H1C1 120.3 120.0
H1C2 C1C C2C C3C 298.2 300.0
H1C2 C1C C2C H2C1 63.5 60.1
H1C2 C1C C2C H2C2 173.0 180.1
C3C C2C C1C H1C1 47.7 59.9
C3C C2C C1C H1C2 298.2 300.0
C1C C2C C3C H2C1 125.3 120.1
C1C C2C C3C H2C2 234.8 240.1
H2C1 C2C C3C H2C2 109.5 120.0
O1B C3C C2C H3C1 234.7 240.0
O1B C3C C2C H3C2 125.3 119.9
C2C C3C O1B C1B 170.6 180.1
H3C1 C3C C2C H3C2 250.6 239.9
H2C1 C2C C1C H1C1 173.0 180.0
H2C1 C2C C1C H1C2 63.5 60.1
C1C C2C H2C1 C3C 235.5 240.0
C1C C2C H2C1 H2C2 117.7 120.0
C3C C2C H2C1 H2C2 242.3 240.0
H2C1 C2C C3C O1B 105.7 60.0
H2C1 C2C C3C H3C1 231.0 179.9
H2C1 C2C C3C H3C2 340.4 300.0
H2C2 C2C C1C H1C1 282.5 300.0
H2C2 C2C C1C H1C2 173.0 180.1
C1C C2C H2C2 C3C 124.5 119.9
C1C C2C H2C2 H2C1 242.3 240.0
C3C C2C H2C2 H2C1 117.7 120.1
H2C2 C2C C3C O1B 356.2 300.0
H2C2 C2C C3C H3C1 121.4 60.0
H2C2 C2C C3C H3C2 230.9 180.0
O1B C3C C2C H2C1 105.7 60.0
O1B C3C C2C H2C2 356.2 300.0
C2C C3C O1B H3C1 125.3 120.1
C2C C3C O1B H3C2 234.7 240.1
H3C1 C3C O1B H3C2 109.4 120.0
C3C O1B C1B C2B 101.6 89.9
C3C O1B C1B C6B 281.6 269.8
H3C1 C3C C2C H2C1 231.0 179.9
H3C1 C3C C2C H2C2 121.4 60.0
C2C C3C H3C1 O1B 246.6 240.0
C2C C3C H3C1 H3C2 123.3 120.1
O1B C3C H3C1 H3C2 236.7 240.1
H3C1 C3C O1B C1B 45.3 60.0
H3C2 C3C C2C H2C1 340.4 300.0
H3C2 C3C C2C H2C2 230.9 180.0
C2C C3C H3C2 O1B 113.4 119.9
C2C C3C H3C2 H3C1 236.7 239.9
O1B C3C H3C2 H3C1 123.3 119.9
H3C2 C3C O1B C1B 295.9 300.0
C1B O1B C3C H3C1 45.3 60.0
C1B O1B C3C H3C2 295.9 300.0
C2B C1B O1B C6B 180.0 180.2
O1B C1B C2B CM2 358.4 0.1
O1B C1B C2B C3B 180.9 180.0
O1B C1B C6B C5B 178.2 179.7
O1B C1B C6B CM6 354.6 0.2
O1B C1B C2B C6B 180.0 179.8
C2B C1B C6B C5B 358.2 359.6
C2B C1B C6B CM6 174.6 180.0
CM2 C2B C1B C3B 177.5 180.1
C1B C2B CM2 HM21 180.0 89.9
C1B C2B CM2 HM22 305.3 209.9
C1B C2B CM2 HM23 54.7 330.0
C1B C2B C3B C4B 0.5 0.0
C1B C2B C3B H3B 180.5 180.1
O1B C1B C6B C2B 180.0 180.2
C6B C1B C2B CM2 178.3 180.2
C6B C1B C2B C3B 0.9 0.2
C4B C5B C6B C1B 1.2 0.4
C1B C6B C5B H5B 181.3 180.2
C5B C6B C1B CM6 183.6 179.6
C1B C6B CM6 HM61 180.0 269.5
C1B C6B CM6 HM62 305.3 29.5
C1B C6B CM6 HM63 54.7 149.5
CM2 C2B C1B C6B 178.3 180.2
C1B C2B CM2 C3B 182.3 179.9
CM2 C2B C3B C4B 183.0 180.0
CM2 C2B C3B H3B 3.0 0.0
HM21 CM2 C2B HM22 234.7 240.0
HM21 CM2 C2B HM23 125.3 120.0
HM22 CM2 C2B HM23 250.6 239.9
C3B C2B C1B C6B 0.9 0.2
C1B C2B C3B CM2 177.5 180.1
C3B C2B CM2 HM21 357.7 270.0
C3B C2B CM2 HM22 123.0 30.0
C3B C2B CM2 HM23 232.4 150.0
C4B C3B C2B H3B 180.0 180.0
C2B C3B C4B C5B 358.9 360.0
C2B C3B C4B C2A 171.4 180.0
HM21 CM2 C2B C3B 357.7 270.0
C2B CM2 HM21 HM22 125.3 120.0
C2B CM2 HM21 HM23 234.7 240.0
HM22 CM2 HM21 HM23 109.5 120.0
HM22 CM2 C2B C3B 123.0 30.0
C2B CM2 HM22 HM21 230.5 240.0
C2B CM2 HM22 HM23 115.2 120.1
HM21 CM2 HM22 HM23 244.7 240.1
HM23 CM2 C2B C3B 232.4 150.0
C2B CM2 HM23 HM21 129.6 120.0
C2B CM2 HM23 HM22 244.8 239.9
HM21 CM2 HM23 HM22 115.3 119.9
C2B C3B C4B H3B 180.0 180.0
C5B C4B C3B C2A 187.5 180.0
C3B C4B C5B C6B 0.2 359.8
C3B C4B C5B H5B 180.2 180.0
C3B C4B C2A N1A 11.7 0.1
C3B C4B C2A N3A 196.1 179.7
C2B C3B H3B C4B 180.0 180.0
H3B C3B C4B C5B 178.9 179.9
H3B C3B C4B C2A 351.4 359.9
C1B C6B C5B C4B 1.2 0.4
C5B C4B C3B H3B 178.9 179.9
C3B C4B C5B C2A 172.3 180.0
C5B C4B C2A N1A 184.9 180.1
C5B C4B C2A N3A 9.3 359.7
C6B C5B C4B H5B 180.0 179.8
C4B C5B C6B CM6 184.3 180.0
C2A C4B C3B H3B 351.4 359.9
C3B C4B C2A C5B 186.8 180.0
C2A C4B C5B C6B 187.9 179.8
C2A C4B C5B H5B 7.9 360.0
N1A C2A C4B N3A 175.6 180.4
C4B C2A N1A O1A 184.4 180.0
C4B C2A N3A C3A 175.2 179.9
C1B C6B C5B CM6 176.9 180.4
C6B C5B C4B C2A 187.9 179.8
C4B C5B C6B H5B 180.0 180.2
C5B C6B CM6 HM61 356.6 90.0
C5B C6B CM6 HM62 121.9 210.0
C5B C6B CM6 HM63 231.3 330.0
H5B C5B C4B C2A 7.9 360.0
C4B C5B H5B C6B 180.0 179.8
H5B C5B C6B CM6 4.4 359.8
C1B C6B CM6 C5B 183.4 179.6
CM6 C6B C5B H5B 4.4 359.8
HM61 CM6 C6B HM62 234.7 240.0
HM61 CM6 C6B HM63 125.3 120.0
HM62 CM6 C6B HM63 250.6 240.0
C6B CM6 HM61 HM62 125.3 119.9
C6B CM6 HM61 HM63 234.7 240.0
HM62 CM6 HM61 HM63 109.4 120.0
C6B CM6 HM62 HM61 222.4 240.0
C6B CM6 HM62 HM63 111.2 120.0
HM61 CM6 HM62 HM63 248.8 240.0
C6B CM6 HM63 HM61 137.5 120.0
C6B CM6 HM63 HM62 248.8 240.1
HM61 CM6 HM63 HM62 111.2 120.1
C4B C2A N1A N3A 184.2 179.7
N1A C2A N3A C3A 359.5 359.5
C2A N1A O1A C3A 0.2 359.9
C4B C2A N3A N1A 175.7 180.3
N3A C2A N1A O1A 0.2 0.3
C2A N3A C3A CM4 186.5 180.2
C2A N3A C3A O1A 0.7 0.4
O1A N1A C2A N3A 0.2 0.3
N3A C3A O1A N1A 359.4 359.8
CM4 C3A O1A N1A 174.2 180.0
N1A O1A C3A N3A 359.4 359.8
CM4 C3A N3A O1A 185.8 179.8
N3A C3A CM4 F1 8.1 180.3
N3A C3A CM4 F2 247.7 300.3
N3A C3A CM4 F3 129.5 60.3
N1A O1A C3A CM4 174.2 180.0
N3A C3A CM4 O1A 174.4 180.3
F1 CM4 C3A F2 120.4 240.0
F1 CM4 C3A F3 238.6 120.0
F2 CM4 C3A F3 118.2 240.0
N3A C3A O1A CM4 185.2 179.8
O1A C3A CM4 F1 193.7 0.0
O1A C3A CM4 F2 73.4 120.0
O1A C3A CM4 F3 315.2 240.1
F1 CM4 C3A O1A 193.7 0.0
C3A CM4 F1 F2 243.3 120.0
C3A CM4 F1 F3 123.2 240.0
F2 CM4 F1 F3 239.8 120.0
F2 CM4 C3A O1A 73.4 120.0
C3A CM4 F2 F1 116.9 240.0
C3A CM4 F2 F3 238.5 120.0
F1 CM4 F2 F3 121.6 240.0
F3 CM4 C3A O1A 315.2 240.1
C3A CM4 F3 F1 240.4 120.0
C3A CM4 F3 F2 117.5 240.0
F1 CM4 F3 F2 237.1 120.0