PDB Chemical Component VX1

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for VX1

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
N1	C2	1.385	1.384
C2	N3	1.346	1.326
C2	N7	1.341	1.323
N3	C4	1.347	1.324
C4	C5	1.403	1.382
C5	C6	1.428	1.400
C6	N7	1.359	1.332
C6	C8	1.505	1.480
C8	C9	1.440	1.409
C8	C23	1.415	1.383
C9	C10	1.383	1.354
C10	C11	1.439	1.412
C11	N12	1.309	1.313
C11	C22	1.501	1.478
N12	O13	1.207	1.210
O13	C14	1.348	1.343
C14	C15	1.498	1.473
C14	C22	1.419	1.396
C15	C16	1.437	1.398
C15	C21	1.430	1.398
C16	C17	1.410	1.379
C17	C18	1.415	1.385
C18	CL19	1.735	1.736
C18	C20	1.407	1.386
C20	C21	1.401	1.379
C22	C23	1.428	1.397
N1	HN1	1.001	0.970
N1	HN1A	0.999	0.970
C4	H4	1.080	1.080
C5	H5	1.080	1.080
C9	H9	1.080	1.080
C10	H10	1.081	1.080
C16	H16	1.080	1.079
C17	H17	1.080	1.080
C20	H20	1.080	1.080
C21	H21	1.080	1.080
C23	H23	1.080	1.081

Bond Angles for VX1

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
N1	C2	N3	119.5	119.1
N1	C2	N7	119.6	119.2
C2	N1	HN1	109.5	120.0
C2	N1	HN1A	109.5	120.0
N3	C2	N7	120.9	121.7
C2	N3	C4	121.3	121.0
C2	N7	C6	121.5	120.6
N3	C4	C5	119.9	119.3
N3	C4	H4	120.0	120.3
C4	C5	C6	117.8	118.4
C5	C4	H4	120.1	120.4
C4	C5	H5	121.1	120.8
C5	C6	N7	118.6	118.9
C5	C6	C8	121.7	120.5
C6	C5	H5	121.1	120.7
N7	C6	C8	119.7	120.5
C6	C8	C9	120.7	119.4
C6	C8	C23	119.0	119.4
C9	C8	C23	120.3	121.2
C8	C9	C10	121.8	121.8
C8	C9	H9	119.1	119.1
C8	C23	C22	120.1	119.2
C8	C23	H23	120.0	120.4
C9	C10	C11	120.1	119.8
C10	C9	H9	119.1	119.1
C9	C10	H10	119.9	120.1
C10	C11	N12	136.1	136.3
C10	C11	C22	118.8	118.6
C11	C10	H10	120.0	120.1
N12	C11	C22	105.1	105.1
C11	N12	O13	112.9	112.5
C11	C22	C14	102.4	103.0
C11	C22	C23	118.8	119.4
N12	O13	C14	114.5	113.6
O13	C14	C15	124.8	127.1
O13	C14	C22	105.0	105.7
C15	C14	C22	130.2	127.1
C14	C15	C16	122.7	120.1
C14	C15	C21	118.4	120.1
C14	C22	C23	138.8	137.6
C16	C15	C21	118.9	119.7
C15	C16	C17	119.9	119.8
C15	C16	H16	120.0	120.1
C15	C21	C20	120.4	119.8
C15	C21	H21	119.8	120.1
C16	C17	C18	120.0	120.2
C17	C16	H16	120.1	120.1
C16	C17	H17	120.0	119.8
C17	C18	CL19	119.9	119.9
C17	C18	C20	120.4	120.3
C18	C17	H17	120.0	120.0
CL19	C18	C20	119.7	119.8
C18	C20	C21	120.3	120.1
C18	C20	H20	119.9	119.9
C21	C20	H20	119.8	120.0
C20	C21	H21	119.8	120.0
C22	C23	H23	119.9	120.4
HN1	N1	HN1A	109.5	120.0

Torsion Angles for VX1

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
N3	C2	N1	N7	179.8	180.3
N1	C2	N3	C4	180.0	180.0
N1	C2	N7	C6	180.1	179.8
HN1	N1	C2	HN1A	240.0	180.4
N1	C2	N3	N7	180.2	179.7
N3	C2	N1	HN1	175.9	0.1
N3	C2	N1	HN1A	295.9	179.7
N3	C2	N7	C6	0.3	359.4
C2	N3	C4	C5	0.1	360.0
C2	N3	C4	H4	180.1	180.0
N1	C2	N7	N3	179.8	180.3
N7	C2	N1	HN1	356.1	179.8
N7	C2	N1	HN1A	116.1	359.4
N7	C2	N3	C4	359.8	0.3
C5	C6	N7	C2	359.8	0.6
C2	N7	C6	C8	180.0	180.3
C4	N3	C2	N7	359.8	0.3
N3	C4	C5	C6	0.0	0.0
C5	C4	N3	H4	180.0	180.0
N3	C4	C5	H5	180.0	180.0
N3	C4	C5	H4	180.0	180.0
C4	C5	C6	N7	0.0	359.7
C4	C5	C6	C8	179.9	180.0
C6	C5	C4	H5	180.0	180.0
C2	N7	C6	C5	359.8	0.6
C6	C5	C4	H4	180.0	180.0
C4	C5	C6	H5	180.0	180.0
N7	C6	C5	C8	180.2	179.7
C5	C6	C8	C9	338.6	5.0
C5	C6	C8	C23	158.8	184.7
C5	C6	N7	C8	179.8	180.3
N7	C6	C5	H5	180.0	179.7
N7	C6	C8	C9	158.5	185.3
N7	C6	C8	C23	338.6	5.0
C5	C6	C8	N7	180.2	179.7
C8	C6	C5	H5	359.9	360.0
C9	C8	C6	C23	179.8	180.3
C6	C8	C9	C10	180.1	180.0
C6	C8	C9	H9	0.0	360.0
C6	C8	C23	C22	179.9	179.8
C6	C8	C23	H23	359.9	360.0
C6	C8	C9	C23	180.2	179.7
C9	C8	C23	C22	0.1	359.5
C9	C8	C23	H23	180.1	179.7
C8	C9	C10	C11	0.0	360.0
C10	C9	C8	H9	180.0	180.0
C8	C9	C10	H10	180.0	180.0
C6	C8	C23	C9	179.8	180.3
C23	C8	C9	C10	359.9	0.3
C23	C8	C9	H9	179.9	180.3
C11	C22	C23	C8	360.0	0.5
C14	C22	C23	C8	180.1	180.1
C22	C23	C8	H23	180.0	179.8
C10	C9	C8	C23	359.9	0.3
C8	C9	C10	H9	180.0	180.0
C9	C10	C11	N12	179.9	180.0
C9	C10	C11	C22	360.0	360.0
C11	C10	C9	H10	180.0	180.0
C11	C10	C9	H9	180.1	180.0
C9	C10	C11	H10	180.0	180.0
N12	C11	C10	C22	180.0	180.0
C10	C11	N12	O13	180.0	180.0
C10	C11	C22	C14	179.9	180.0
C10	C11	C22	C23	360.0	359.8
C10	C11	N12	C22	180.0	180.0
N12	C11	C10	H10	360.0	360.0
N12	C11	C22	C14	359.9	0.0
N12	C11	C22	C23	180.0	179.8
C11	N12	O13	C14	0.1	0.0
C8	C23	C22	C11	360.0	0.5
C10	C11	C22	N12	180.0	180.0
C22	C11	C10	H10	180.0	180.0
C22	C11	N12	O13	360.0	360.0
O13	C14	C22	C11	0.1	0.0
C15	C14	C22	C11	180.1	180.0
C14	C22	C11	C23	179.9	180.2
C11	C22	C23	H23	180.0	180.3
O13	N12	C11	C22	360.0	360.0
N12	O13	C14	C15	179.9	180.0
N12	O13	C14	C22	359.9	360.0
C11	C22	C14	O13	0.1	0.0
C15	C14	O13	C22	180.0	180.0
O13	C14	C15	C16	175.1	313.6
O13	C14	C15	C21	355.1	133.3
O13	C14	C22	C23	180.0	180.3
C11	C22	C14	C15	180.1	180.0
O13	C14	C15	C22	179.9	180.0
C15	C14	C22	C23	359.9	0.3
C16	C15	C14	C21	180.0	180.3
C14	C15	C16	C17	180.0	180.0
C14	C15	C16	H16	360.0	360.0
C14	C15	C21	C20	180.0	179.7
C14	C15	C21	H21	0.0	0.0
C8	C23	C22	C14	180.1	180.1
C11	C22	C14	C23	180.1	179.7
O13	C14	C22	C15	180.1	180.0
C22	C14	C15	C16	355.1	133.6
C22	C14	C15	C21	175.2	313.4
C14	C22	C23	H23	0.1	359.9
C16	C15	C14	C22	355.1	133.6
C14	C15	C16	C21	180.0	179.7
C16	C15	C21	C20	0.0	359.5
C16	C15	C21	H21	180.0	179.8
C15	C16	C17	C18	0.1	0.1
C17	C16	C15	H16	180.0	180.0
C15	C16	C17	H17	180.1	180.0
C21	C15	C14	C22	175.2	313.4
C14	C15	C21	C16	180.0	180.3
C21	C15	C16	C17	359.9	0.2
C21	C15	C16	H16	180.0	180.2
C18	C20	C21	C15	359.9	0.5
C15	C21	C20	H20	180.0	180.3
C20	C21	C15	H21	180.0	179.7
C17	C16	C15	C21	359.9	0.2
C15	C16	C17	H16	180.0	180.0
C16	C17	C18	CL19	180.0	179.9
C16	C17	C18	C20	359.9	359.9
C18	C17	C16	H17	180.0	180.1
C18	C17	C16	H16	180.1	180.1
C16	C17	C18	H17	180.0	179.9
CL19	C18	C17	C20	180.1	180.0
C17	C18	C20	C21	0.1	359.8
C17	C18	C20	H20	180.1	180.0
C17	C18	CL19	C20	179.9	180.0
CL19	C18	C17	H17	0.0	0.0
CL19	C18	C20	C21	180.0	179.8
CL19	C18	C20	H20	360.0	360.0
C15	C21	C20	C18	359.9	0.5
C17	C18	C20	CL19	180.1	180.0
C20	C18	C17	H17	179.9	180.0
C21	C20	C18	H20	180.0	179.8
C18	C20	C21	H21	179.9	180.2
C15	C21	C20	H21	180.0	180.3
C18	C20	C21	H20	180.0	180.2
C8	C23	C22	H23	180.0	180.2
C11	C22	C23	C14	179.9	180.3
HN1	N1	C2	N3	175.9	0.1
HN1	N1	C2	N7	356.1	179.8
C2	N1	HN1	HN1A	120.0	179.6
HN1A	N1	C2	N3	295.9	179.7
HN1A	N1	C2	N7	116.1	359.4
C2	N1	HN1A	HN1	240.0	180.4
N3	C4	H4	C5	180.0	180.0
H4	C4	C5	C6	180.0	180.0
H4	C4	C5	H5	0.0	360.0
C4	C5	H5	C6	180.0	180.0
H5	C5	C4	H4	0.0	360.0
H5	C5	C6	N7	180.0	179.7
H5	C5	C6	C8	359.9	360.0
H9	C9	C8	C23	179.9	180.3
C8	C9	H9	C10	180.0	180.0
H9	C9	C10	C11	180.1	180.0
H9	C9	C10	H10	0.0	0.0
C9	C10	H10	C11	180.0	180.0
H10	C10	C9	H9	0.0	0.0
H10	C10	C11	N12	360.0	360.0
H10	C10	C11	C22	180.0	180.0
H16	C16	C15	C21	180.0	180.2
C15	C16	H16	C17	180.0	180.0
H16	C16	C17	C18	180.1	180.1
H16	C16	C17	H17	0.1	0.0
C16	C17	H17	C18	180.0	180.1
H17	C17	C16	H16	0.1	0.0
H17	C17	C18	CL19	0.0	0.0
H17	C17	C18	C20	179.9	180.0
C18	C20	H20	C21	180.0	179.8
H20	C20	C21	H21	360.0	0.0
C15	C21	H21	C20	180.0	179.7
H21	C21	C20	H20	360.0	0.0
C8	C23	H23	C22	180.0	179.8