PDB Chemical Component VWS
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for VWS
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O1 |
S1 |
1.451 |
1.421 |
| O2 |
S1 |
1.457 |
1.421 |
| S1 |
C1 |
1.619 |
1.762 |
| S1 |
N1 |
1.597 |
1.656 |
| C1 |
C3 |
1.395 |
1.383 |
| C1 |
C2 |
1.451 |
1.382 |
| C3 |
C4 |
1.391 |
1.382 |
| C2 |
C6 |
1.421 |
1.382 |
| N1 |
C12 |
1.369 |
1.398 |
| C4 |
C5 |
1.390 |
1.384 |
| C6 |
C5 |
1.424 |
1.382 |
| C5 |
CL1 |
1.764 |
1.736 |
| C12 |
C7 |
1.426 |
1.393 |
| C12 |
C11 |
1.439 |
1.386 |
| C7 |
C8 |
1.423 |
1.378 |
| C11 |
C10 |
1.427 |
1.391 |
| C8 |
C9 |
1.426 |
1.389 |
| C10 |
C9 |
1.411 |
1.402 |
| C10 |
C13 |
1.433 |
1.477 |
| C9 |
O3 |
1.322 |
1.350 |
| O4 |
C15 |
1.255 |
1.215 |
| C13 |
C15 |
1.525 |
1.469 |
| C13 |
C14 |
1.406 |
1.362 |
| O3 |
C14 |
1.380 |
1.337 |
| C15 |
O5 |
1.256 |
1.349 |
| C14 |
C16 |
1.525 |
1.507 |
| C4 |
H1 |
1.080 |
1.080 |
| C3 |
H2 |
1.080 |
1.080 |
| C6 |
H3 |
1.080 |
1.081 |
| C2 |
H4 |
1.079 |
1.080 |
| N1 |
H5 |
1.000 |
0.970 |
| C7 |
H6 |
1.080 |
1.080 |
| C8 |
H7 |
1.080 |
1.080 |
| C11 |
H8 |
1.080 |
1.079 |
| O5 |
H9 |
0.950 |
0.967 |
| C16 |
H10 |
1.100 |
1.090 |
| C16 |
H11 |
1.100 |
1.091 |
| C16 |
H12 |
1.100 |
1.090 |
Bond Angles for VWS
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O1 |
S1 |
N1 |
124.1 |
106.4 |
| O2 |
S1 |
N1 |
92.3 |
106.5 |
| S1 |
N1 |
C12 |
131.8 |
120.0 |
| S1 |
N1 |
H5 |
103.6 |
119.9 |
| C1 |
C3 |
H2 |
119.0 |
120.0 |
| C1 |
C2 |
H4 |
120.1 |
120.0 |
| C3 |
C4 |
H1 |
120.3 |
120.0 |
| C2 |
C6 |
H3 |
121.0 |
120.0 |
| N1 |
C12 |
C7 |
122.3 |
120.0 |
| N1 |
C12 |
C11 |
117.5 |
120.0 |
| C12 |
N1 |
H5 |
103.6 |
120.0 |
| C7 |
C12 |
C11 |
120.1 |
120.0 |
| C12 |
C7 |
C8 |
120.2 |
120.6 |
| C12 |
C7 |
H6 |
119.9 |
119.7 |
| C12 |
C11 |
C10 |
119.6 |
119.5 |
| C12 |
C11 |
H8 |
120.2 |
120.2 |
| C7 |
C8 |
C9 |
118.9 |
120.1 |
| C8 |
C7 |
H6 |
119.9 |
119.7 |
| C7 |
C8 |
H7 |
120.6 |
120.0 |
| C11 |
C10 |
C9 |
119.3 |
120.4 |
| C11 |
C10 |
C13 |
136.8 |
134.1 |
| C10 |
C11 |
H8 |
120.2 |
120.3 |
| C8 |
C9 |
C10 |
121.9 |
119.4 |
| C8 |
C9 |
O3 |
126.7 |
133.0 |
| C9 |
C8 |
H7 |
120.6 |
120.0 |
| C13 |
C10 |
C9 |
103.8 |
105.5 |
| C10 |
C9 |
O3 |
111.4 |
107.6 |
| C10 |
C13 |
C15 |
124.7 |
127.2 |
| C10 |
C13 |
C14 |
108.1 |
105.7 |
| C9 |
O3 |
C14 |
109.6 |
111.4 |
| O4 |
C15 |
O5 |
119.1 |
120.0 |
| C15 |
C13 |
C14 |
127.2 |
127.1 |
| C13 |
C15 |
O5 |
118.3 |
120.0 |
| C13 |
C14 |
O3 |
107.1 |
109.8 |
| C13 |
C14 |
C16 |
136.3 |
125.1 |
| O3 |
C14 |
C16 |
116.7 |
125.1 |
| C15 |
O5 |
H9 |
109.5 |
117.0 |
| C14 |
C16 |
H10 |
109.5 |
109.5 |
| C14 |
C16 |
H11 |
109.4 |
109.4 |
| C14 |
C16 |
H12 |
109.4 |
109.5 |
| H10 |
C16 |
H11 |
109.5 |
109.5 |
| H10 |
C16 |
H12 |
109.5 |
109.5 |
| H11 |
C16 |
H12 |
109.5 |
109.5 |
Torsion Angles for VWS
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O2 |
S1 |
O1 |
N1 |
91.3 |
123.0 |
| O1 |
S1 |
N1 |
C12 |
167.7 |
311.5 |
| O1 |
S1 |
N1 |
H5 |
290.5 |
131.5 |
| O1 |
S1 |
O2 |
N1 |
235.9 |
237.0 |
| O2 |
S1 |
N1 |
C12 |
78.9 |
178.5 |
| O2 |
S1 |
N1 |
H5 |
201.7 |
358.5 |
| S1 |
C1 |
C3 |
H2 |
358.5 |
0.1 |
| S1 |
C1 |
C2 |
H4 |
2.1 |
360.0 |
| S1 |
N1 |
C12 |
C7 |
297.7 |
45.0 |
| S1 |
N1 |
C12 |
C11 |
120.1 |
224.7 |
| C12 |
N1 |
S1 |
H5 |
237.2 |
180.0 |
| C1 |
C3 |
C4 |
H1 |
179.3 |
180.0 |
| C2 |
C1 |
C3 |
H2 |
180.2 |
179.7 |
| C1 |
C2 |
C6 |
H3 |
180.0 |
180.0 |
| S1 |
N1 |
C12 |
H5 |
122.8 |
180.0 |
| C7 |
C12 |
N1 |
C11 |
177.5 |
180.3 |
| N1 |
C12 |
C7 |
C8 |
182.5 |
180.0 |
| N1 |
C12 |
C7 |
H6 |
2.5 |
359.9 |
| N1 |
C12 |
C11 |
C10 |
177.3 |
180.0 |
| N1 |
C12 |
C11 |
H8 |
357.3 |
360.0 |
| N1 |
C12 |
C7 |
C11 |
182.5 |
179.7 |
| C7 |
C12 |
N1 |
H5 |
174.9 |
225.0 |
| C7 |
C12 |
C11 |
C10 |
359.7 |
359.7 |
| C7 |
C12 |
C11 |
H8 |
179.7 |
179.7 |
| C12 |
C7 |
C8 |
C9 |
0.3 |
359.9 |
| C8 |
C7 |
C12 |
H6 |
180.0 |
180.1 |
| C12 |
C7 |
C8 |
H7 |
180.3 |
180.0 |
| N1 |
C12 |
C11 |
C7 |
177.6 |
180.3 |
| C11 |
C12 |
N1 |
H5 |
357.3 |
44.7 |
| C11 |
C12 |
C7 |
C8 |
360.0 |
0.4 |
| C11 |
C12 |
C7 |
H6 |
179.9 |
180.2 |
| C12 |
C11 |
C10 |
C9 |
0.3 |
360.0 |
| C12 |
C11 |
C10 |
C13 |
180.3 |
180.0 |
| C10 |
C11 |
C12 |
H8 |
180.0 |
180.0 |
| C8 |
C7 |
C12 |
C11 |
360.0 |
0.4 |
| C12 |
C7 |
C8 |
H6 |
180.0 |
179.9 |
| C7 |
C8 |
C9 |
C10 |
359.7 |
359.8 |
| C7 |
C8 |
C9 |
O3 |
179.8 |
179.9 |
| C9 |
C8 |
C7 |
H7 |
180.0 |
179.9 |
| C12 |
C11 |
C10 |
H8 |
180.0 |
180.0 |
| C8 |
C9 |
C10 |
C11 |
360.0 |
0.3 |
| C13 |
C10 |
C11 |
C9 |
179.9 |
180.0 |
| C11 |
C10 |
C9 |
O3 |
179.9 |
180.2 |
| C11 |
C10 |
C13 |
C15 |
359.3 |
0.0 |
| C11 |
C10 |
C13 |
C14 |
179.4 |
180.0 |
| C9 |
C8 |
C7 |
H6 |
180.3 |
180.0 |
| C7 |
C8 |
C9 |
H7 |
180.0 |
180.1 |
| C11 |
C10 |
C9 |
C8 |
360.0 |
0.3 |
| C13 |
C10 |
C9 |
C8 |
180.0 |
180.2 |
| C10 |
C9 |
C8 |
O3 |
180.0 |
179.9 |
| C8 |
C9 |
O3 |
C14 |
180.7 |
179.6 |
| C11 |
C10 |
C9 |
C13 |
180.0 |
180.0 |
| C9 |
C10 |
C11 |
H8 |
180.3 |
180.0 |
| C8 |
C9 |
C10 |
O3 |
180.0 |
180.1 |
| C10 |
C9 |
C8 |
H7 |
179.7 |
179.7 |
| C9 |
C10 |
C13 |
C15 |
179.3 |
180.0 |
| C9 |
C10 |
C13 |
C14 |
359.4 |
360.0 |
| C10 |
C9 |
O3 |
C14 |
0.7 |
359.8 |
| C11 |
C10 |
C13 |
C9 |
180.0 |
180.0 |
| C13 |
C10 |
C11 |
H8 |
0.3 |
0.1 |
| C8 |
C9 |
C10 |
C13 |
180.0 |
180.2 |
| C13 |
C10 |
C9 |
O3 |
360.0 |
0.1 |
| C15 |
C13 |
C10 |
C14 |
179.9 |
180.0 |
| C10 |
C13 |
C15 |
O5 |
185.1 |
270.0 |
| C10 |
C13 |
C14 |
O3 |
1.0 |
359.9 |
| C10 |
C13 |
C14 |
C16 |
179.9 |
180.0 |
| C8 |
C9 |
O3 |
C10 |
180.0 |
179.9 |
| O3 |
C9 |
C8 |
H7 |
359.8 |
359.8 |
| C13 |
C14 |
O3 |
C9 |
358.9 |
0.2 |
| C9 |
O3 |
C14 |
C16 |
179.8 |
180.1 |
| O4 |
C15 |
C13 |
C14 |
183.0 |
270.0 |
| C13 |
C15 |
O4 |
O5 |
182.1 |
180.0 |
| O4 |
C15 |
O5 |
H9 |
0.0 |
360.0 |
| C15 |
C13 |
C10 |
C9 |
179.3 |
180.0 |
| C10 |
C13 |
C15 |
C14 |
180.1 |
180.0 |
| O4 |
C15 |
C13 |
O5 |
178.0 |
180.0 |
| C15 |
C13 |
C14 |
O3 |
181.1 |
179.8 |
| C15 |
C13 |
C14 |
C16 |
360.0 |
360.0 |
| C13 |
C15 |
O5 |
H9 |
178.1 |
180.0 |
| C14 |
C13 |
C10 |
C9 |
359.4 |
360.0 |
| C10 |
C13 |
C14 |
C15 |
179.9 |
180.0 |
| C9 |
O3 |
C14 |
C13 |
358.9 |
0.2 |
| C14 |
C13 |
C15 |
O5 |
5.0 |
90.0 |
| O3 |
C14 |
C13 |
C16 |
181.1 |
179.8 |
| C13 |
C14 |
C16 |
H10 |
181.2 |
90.0 |
| C13 |
C14 |
C16 |
H11 |
301.3 |
210.0 |
| C13 |
C14 |
C16 |
H12 |
61.2 |
330.0 |
| C13 |
C14 |
O3 |
C16 |
179.1 |
180.2 |
| O3 |
C14 |
C16 |
H10 |
0.0 |
270.2 |
| O3 |
C14 |
C16 |
H11 |
120.0 |
30.2 |
| O3 |
C14 |
C16 |
H12 |
240.0 |
150.2 |
| O5 |
C15 |
C13 |
C14 |
5.0 |
90.0 |
| C13 |
C14 |
C16 |
O3 |
181.2 |
179.8 |
| H10 |
C16 |
C14 |
H11 |
240.0 |
240.0 |
| H10 |
C16 |
C14 |
H12 |
120.0 |
120.1 |
| H11 |
C16 |
C14 |
H12 |
240.0 |
240.0 |
| H2 |
C3 |
C4 |
H1 |
359.2 |
359.9 |
| H4 |
C2 |
C6 |
H3 |
0.1 |
0.0 |
| S1 |
N1 |
H5 |
C12 |
220.2 |
180.0 |
| H5 |
N1 |
C12 |
C7 |
174.9 |
225.0 |
| H5 |
N1 |
C12 |
C11 |
357.3 |
44.7 |
| H6 |
C7 |
C12 |
C11 |
179.9 |
180.2 |
| C12 |
C7 |
H6 |
C8 |
180.0 |
180.1 |
| H6 |
C7 |
C8 |
C9 |
180.3 |
180.0 |
| H6 |
C7 |
C8 |
H7 |
0.3 |
0.1 |
| C7 |
C8 |
H7 |
C9 |
180.0 |
179.9 |
| H7 |
C8 |
C7 |
H6 |
0.3 |
0.1 |
| H7 |
C8 |
C9 |
C10 |
179.7 |
179.7 |
| H7 |
C8 |
C9 |
O3 |
359.8 |
359.8 |
| C12 |
C11 |
H8 |
C10 |
180.0 |
180.0 |
| H8 |
C11 |
C10 |
C9 |
180.3 |
180.0 |
| H8 |
C11 |
C10 |
C13 |
0.3 |
0.1 |
| C14 |
C16 |
H10 |
H11 |
120.0 |
119.9 |
| C14 |
C16 |
H10 |
H12 |
240.0 |
240.0 |
| H11 |
C16 |
H10 |
H12 |
120.0 |
120.0 |
| C14 |
C16 |
H11 |
H10 |
240.0 |
240.0 |
| C14 |
C16 |
H11 |
H12 |
120.0 |
120.0 |
| H10 |
C16 |
H11 |
H12 |
240.0 |
240.0 |
| C14 |
C16 |
H12 |
H10 |
120.0 |
120.0 |
| C14 |
C16 |
H12 |
H11 |
240.0 |
240.0 |
| H10 |
C16 |
H12 |
H11 |
120.0 |
120.0 |