PDB Chemical Component VVV
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for VVV
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C6 |
C1 |
1.462 |
1.386 |
C1 |
O11 |
1.377 |
1.359 |
C1 |
C2 |
1.488 |
1.404 |
C3 |
C2 |
1.444 |
1.408 |
C2 |
C7 |
1.509 |
1.462 |
C4 |
C3 |
1.474 |
1.393 |
C3 |
N10 |
1.322 |
1.382 |
O17 |
C4 |
1.380 |
1.361 |
C5 |
C4 |
1.390 |
1.382 |
C5 |
C6 |
1.415 |
1.390 |
C5 |
H5 |
1.080 |
1.080 |
O13 |
C6 |
1.345 |
1.361 |
C7 |
C8 |
1.393 |
1.357 |
C7 |
C15 |
1.493 |
1.507 |
C9 |
C8 |
1.427 |
1.410 |
C8 |
H8 |
1.080 |
1.080 |
N10 |
C9 |
1.345 |
1.344 |
C9 |
O16 |
1.274 |
1.219 |
N10 |
HN10 |
1.000 |
0.971 |
O11 |
C12 |
1.437 |
1.429 |
C12 |
H12 |
1.100 |
1.090 |
C12 |
H12A |
1.100 |
1.090 |
C12 |
H12B |
1.100 |
1.090 |
C14 |
O13 |
1.414 |
1.430 |
C14 |
H14 |
1.100 |
1.090 |
C14 |
H14A |
1.100 |
1.090 |
C14 |
H14B |
1.100 |
1.089 |
C15 |
H15 |
1.101 |
1.089 |
C15 |
H15A |
1.100 |
1.090 |
C15 |
H15B |
1.100 |
1.090 |
C18 |
O17 |
1.422 |
1.429 |
C18 |
H18 |
1.100 |
1.090 |
C18 |
H18A |
1.100 |
1.091 |
C18 |
H18B |
1.100 |
1.090 |
Bond Angles for VVV
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C1 |
O11 |
116.8 |
120.3 |
C2 |
C1 |
O11 |
126.7 |
120.2 |
C1 |
O11 |
C12 |
133.9 |
117.0 |
C1 |
C2 |
C7 |
122.8 |
121.1 |
C3 |
C2 |
C7 |
118.2 |
119.0 |
C2 |
C7 |
C8 |
118.5 |
118.6 |
C2 |
C7 |
C15 |
119.3 |
120.7 |
C4 |
C3 |
N10 |
118.4 |
120.9 |
C3 |
N10 |
C9 |
122.5 |
120.9 |
C3 |
N10 |
HN10 |
118.7 |
119.5 |
C6 |
C5 |
H5 |
118.7 |
119.6 |
C8 |
C7 |
C15 |
122.1 |
120.7 |
C7 |
C8 |
H8 |
121.5 |
119.8 |
C7 |
C15 |
H15 |
109.5 |
109.5 |
C7 |
C15 |
H15A |
109.5 |
109.5 |
C7 |
C15 |
H15B |
109.5 |
109.5 |
C9 |
C8 |
H8 |
121.5 |
119.9 |
N10 |
C9 |
O16 |
114.3 |
119.2 |
O11 |
C12 |
H12 |
109.5 |
109.5 |
O11 |
C12 |
H12A |
109.5 |
109.4 |
O11 |
C12 |
H12B |
109.4 |
109.5 |
H12 |
C12 |
H12A |
109.4 |
109.5 |
H12 |
C12 |
H12B |
109.5 |
109.5 |
H12A |
C12 |
H12B |
109.5 |
109.5 |
H14 |
C14 |
H14A |
109.5 |
109.5 |
H14 |
C14 |
H14B |
109.5 |
109.5 |
H14A |
C14 |
H14B |
109.5 |
109.5 |
H15 |
C15 |
H15A |
109.4 |
109.5 |
H15 |
C15 |
H15B |
109.5 |
109.4 |
H15A |
C15 |
H15B |
109.5 |
109.4 |
H18 |
C18 |
H18A |
109.5 |
109.5 |
H18 |
C18 |
H18B |
109.5 |
109.4 |
H18A |
C18 |
H18B |
109.5 |
109.4 |
Torsion Angles for VVV
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
O11 |
176.4 |
179.7 |
C6 |
C1 |
O11 |
C12 |
203.0 |
82.7 |
C6 |
C1 |
C2 |
C7 |
182.4 |
180.3 |
O11 |
C1 |
C2 |
C7 |
358.4 |
359.9 |
C1 |
O11 |
C12 |
H12 |
180.0 |
64.7 |
C1 |
O11 |
C12 |
H12A |
300.0 |
184.7 |
C1 |
O11 |
C12 |
H12B |
60.0 |
304.7 |
C6 |
C1 |
C2 |
O11 |
184.0 |
180.3 |
C2 |
C1 |
O11 |
C12 |
27.1 |
263.0 |
C3 |
C2 |
C1 |
C7 |
179.3 |
180.1 |
C1 |
C2 |
C7 |
C8 |
181.5 |
180.1 |
C1 |
C2 |
C7 |
C15 |
358.6 |
0.1 |
C3 |
C2 |
C1 |
O11 |
177.6 |
180.0 |
C1 |
C2 |
C3 |
C7 |
180.7 |
179.9 |
C3 |
C2 |
C7 |
C8 |
2.2 |
360.0 |
C3 |
C2 |
C7 |
C15 |
179.3 |
180.0 |
C7 |
C2 |
C1 |
O11 |
358.4 |
359.9 |
C8 |
C7 |
C2 |
C15 |
182.9 |
180.0 |
C2 |
C7 |
C8 |
H8 |
177.5 |
180.0 |
C2 |
C7 |
C15 |
H15 |
180.0 |
84.1 |
C2 |
C7 |
C15 |
H15A |
300.0 |
204.1 |
C2 |
C7 |
C15 |
H15B |
60.0 |
324.1 |
C4 |
C3 |
C2 |
C7 |
177.3 |
180.1 |
C4 |
C3 |
N10 |
C9 |
181.5 |
180.0 |
C4 |
C3 |
N10 |
HN10 |
1.5 |
359.9 |
N10 |
C3 |
C2 |
C7 |
359.3 |
360.0 |
C3 |
N10 |
C9 |
O16 |
181.2 |
180.0 |
C5 |
C4 |
C3 |
N10 |
179.3 |
180.0 |
C5 |
C6 |
C1 |
O11 |
182.9 |
179.7 |
O13 |
C6 |
C5 |
H5 |
360.0 |
359.7 |
C2 |
C7 |
C8 |
C15 |
177.0 |
180.0 |
C8 |
C7 |
C15 |
H15 |
357.0 |
264.1 |
C8 |
C7 |
C15 |
H15A |
116.9 |
24.1 |
C8 |
C7 |
C15 |
H15B |
237.0 |
144.1 |
C9 |
C8 |
C7 |
H8 |
180.0 |
180.0 |
C2 |
C7 |
C15 |
C8 |
183.1 |
180.0 |
C15 |
C7 |
C8 |
H8 |
0.5 |
360.0 |
H15 |
C15 |
C7 |
H15A |
240.0 |
240.0 |
H15 |
C15 |
C7 |
H15B |
120.0 |
120.0 |
H15A |
C15 |
C7 |
H15B |
240.0 |
240.0 |
C3 |
N10 |
C9 |
C8 |
0.0 |
359.9 |
C9 |
C8 |
C7 |
C15 |
180.5 |
180.0 |
C7 |
C8 |
C9 |
H8 |
180.0 |
180.0 |
H8 |
C8 |
C7 |
C15 |
0.5 |
360.0 |
C3 |
N10 |
C9 |
HN10 |
180.0 |
179.9 |
N10 |
C9 |
C8 |
H8 |
181.5 |
180.1 |
O16 |
C9 |
C8 |
H8 |
0.3 |
360.0 |
C3 |
N10 |
HN10 |
C9 |
180.0 |
180.1 |
HN10 |
N10 |
C9 |
O16 |
1.1 |
0.1 |
H12 |
C12 |
O11 |
H12A |
240.0 |
240.0 |
H12 |
C12 |
O11 |
H12B |
120.0 |
120.0 |
H12A |
C12 |
O11 |
H12B |
240.0 |
240.0 |
O11 |
C12 |
H12 |
H12A |
120.0 |
120.0 |
O11 |
C12 |
H12 |
H12B |
240.0 |
240.0 |
H12A |
C12 |
H12 |
H12B |
120.0 |
120.0 |
O11 |
C12 |
H12A |
H12 |
240.0 |
240.0 |
O11 |
C12 |
H12A |
H12B |
120.0 |
120.0 |
H12 |
C12 |
H12A |
H12B |
240.0 |
240.0 |
O11 |
C12 |
H12B |
H12 |
120.0 |
120.0 |
O11 |
C12 |
H12B |
H12A |
240.0 |
240.0 |
H12 |
C12 |
H12B |
H12A |
120.0 |
120.0 |
H14A |
C14 |
H14 |
H14B |
120.1 |
120.1 |
H14 |
C14 |
H14A |
H14B |
240.0 |
240.0 |
H14 |
C14 |
H14B |
H14A |
120.0 |
120.1 |
C7 |
C15 |
H15 |
H15A |
120.0 |
120.0 |
C7 |
C15 |
H15 |
H15B |
240.0 |
240.0 |
H15A |
C15 |
H15 |
H15B |
120.0 |
119.9 |
C7 |
C15 |
H15A |
H15 |
240.0 |
240.0 |
C7 |
C15 |
H15A |
H15B |
120.0 |
120.0 |
H15 |
C15 |
H15A |
H15B |
240.0 |
240.1 |
C7 |
C15 |
H15B |
H15 |
120.0 |
120.0 |
C7 |
C15 |
H15B |
H15A |
240.0 |
240.0 |
H15 |
C15 |
H15B |
H15A |
120.0 |
120.0 |
H18A |
C18 |
H18 |
H18B |
120.0 |
119.9 |
H18 |
C18 |
H18A |
H18B |
240.0 |
240.1 |
H18 |
C18 |
H18B |
H18A |
120.0 |
119.9 |