PDB Chemical Component VU3

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for VU3

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
CAW CAO 1.517 1.507
CAW CAP 1.536 1.530
CAO NAQ 1.358 1.369
CAO C17 1.392 1.343
NAQ CAX 1.348 1.377
CAX CAN 1.396 1.391
CAX CAM 1.381 1.407
CAN CAJ 1.398 1.378
CAJ CAF 1.398 1.388
CAF CAI 1.397 1.366
CAI CAM 1.397 1.397
CAM C17 1.427 1.465
CAP N1 1.477 1.469
CAV CAD 1.396 1.382
CAV CAU 1.396 1.382
CAD CAC 1.394 1.382
CAC CAR 1.394 1.382
CAR CAE 1.396 1.383
CAE CAU 1.401 1.383
CAU CAS 1.487 1.506
CAS CAT 1.529 1.531
CAS CAK 1.534 1.532
CAT CAL 1.524 1.530
CAK CAG 1.535 1.530
CAG N1 1.476 1.468
CAL N1 1.467 1.469
CAW HAW1 1.100 1.090
CAW HAW2 1.100 1.089
CAP HAP1 1.100 1.090
CAP HAP2 1.100 1.089
NAQ HAQ 1.000 0.970
C17 H17 1.080 1.079
CAN HAN 1.080 1.080
CAJ HAJ 1.080 1.079
CAF HAF 1.080 1.080
CAI HAI 1.080 1.081
CAV HAV 1.080 1.081
CAD HAD 1.080 1.080
CAC HAC 1.080 1.080
CAR HAR 1.080 1.080
CAE HAE 1.080 1.080
CAS HAS 1.100 1.090
CAT HAT1 1.100 1.090
CAT HAT2 1.100 1.090
CAK HAK1 1.100 1.091
CAK HAK2 1.100 1.089
CAL HAL1 1.100 1.090
CAL HAL2 1.100 1.090
CAG HAG1 1.100 1.090
CAG HAG2 1.100 1.090

Bond Angles for VU3

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CAO CAW CAP 110.1 109.5
CAW CAO NAQ 125.0 125.0
CAW CAO C17 125.1 125.1
CAO CAW HAW1 109.2 109.4
CAO CAW HAW2 109.1 109.5
CAW CAP N1 109.7 109.5
CAP CAW HAW1 109.3 109.5
CAP CAW HAW2 109.1 109.6
CAW CAP HAP1 109.4 109.5
CAW CAP HAP2 109.3 109.5
NAQ CAO C17 109.7 109.9
CAO NAQ CAX 111.4 109.9
CAO NAQ HAQ 124.3 125.1
CAO C17 CAM 102.6 107.0
CAO C17 H17 128.7 126.5
NAQ CAX CAN 134.5 133.5
NAQ CAX CAM 104.9 107.1
CAX NAQ HAQ 124.3 125.0
CAN CAX CAM 120.6 119.3
CAX CAN CAJ 119.4 119.8
CAX CAN HAN 120.3 120.1
CAX CAM CAI 120.4 119.9
CAX CAM C17 111.4 106.1
CAN CAJ CAF 120.1 120.7
CAJ CAN HAN 120.3 120.1
CAN CAJ HAJ 120.0 119.7
CAJ CAF CAI 120.0 120.5
CAF CAJ HAJ 119.9 119.7
CAJ CAF HAF 120.0 119.8
CAF CAI CAM 119.5 119.8
CAI CAF HAF 120.0 119.7
CAF CAI HAI 120.3 120.1
CAI CAM C17 128.2 134.1
CAM CAI HAI 120.2 120.1
CAM C17 H17 128.7 126.5
CAP N1 CAG 116.4 111.0
CAP N1 CAL 112.2 111.0
N1 CAP HAP1 109.4 109.5
N1 CAP HAP2 109.3 109.5
CAD CAV CAU 120.1 120.0
CAV CAD CAC 120.5 120.0
CAD CAV HAV 120.0 120.0
CAV CAD HAD 119.8 120.0
CAV CAU CAE 119.2 120.0
CAV CAU CAS 119.8 120.1
CAU CAV HAV 120.0 120.0
CAD CAC CAR 119.7 120.0
CAC CAD HAD 119.8 120.0
CAD CAC HAC 120.1 120.0
CAC CAR CAE 119.8 120.0
CAR CAC HAC 120.2 120.0
CAC CAR HAR 120.1 120.0
CAR CAE CAU 120.6 120.0
CAE CAR HAR 120.1 119.9
CAR CAE HAE 119.7 120.0
CAE CAU CAS 120.8 120.0
CAU CAE HAE 119.7 120.0
CAU CAS CAT 112.0 109.5
CAU CAS CAK 114.5 109.6
CAU CAS HAS 105.5 109.5
CAT CAS CAK 113.3 109.1
CAS CAT CAL 110.9 109.3
CAT CAS HAS 106.8 109.5
CAS CAT HAT1 109.0 109.5
CAS CAT HAT2 108.7 109.5
CAS CAK CAG 111.8 109.3
CAK CAS HAS 103.9 109.5
CAS CAK HAK1 108.7 109.4
CAS CAK HAK2 108.2 109.5
CAT CAL N1 106.3 109.5
CAL CAT HAT1 109.0 109.5
CAL CAT HAT2 108.7 109.5
CAT CAL HAL1 110.5 109.5
CAT CAL HAL2 111.2 109.5
CAK CAG N1 107.9 109.5
CAG CAK HAK1 108.7 109.5
CAG CAK HAK2 108.2 109.6
CAK CAG HAG1 110.0 109.5
CAK CAG HAG2 110.4 109.4
CAG N1 CAL 110.5 111.2
N1 CAG HAG1 110.0 109.4
N1 CAG HAG2 110.4 109.5
N1 CAL HAL1 110.6 109.4
N1 CAL HAL2 111.3 109.4
HAW1 CAW HAW2 110.0 109.5
HAP1 CAP HAP2 109.7 109.5
HAT1 CAT HAT2 110.5 109.5
HAK1 CAK HAK2 111.3 109.5
HAL1 CAL HAL2 107.0 109.5
HAG1 CAG HAG2 108.2 109.5

Torsion Angles for VU3

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
CAO CAW CAP N1 337.5 180.0
CAP CAW CAO HAW1 240.0 240.0
CAP CAW CAO HAW2 119.7 120.1
CAO CAW CAP HAP1 97.5 299.9
CAO CAW CAP HAP2 217.6 60.0
NAQ CAO CAW C17 173.9 180.3
CAW CAO NAQ CAX 183.5 180.0
CAW CAO NAQ HAQ 3.5 0.1
CAW CAO C17 CAM 176.4 179.8
CAW CAO C17 H17 356.3 360.0
HAW1 CAW CAO HAW2 239.7 240.1
CAP CAW CAO NAQ 92.1 95.0
CAP CAW CAO C17 278.2 274.7
CAO CAW CAP HAW1 120.0 119.9
CAO CAW CAP HAW2 240.3 240.0
CAW CAP N1 CAG 143.4 169.9
CAW CAP N1 CAL 272.1 294.2
N1 CAP CAW HAP1 240.0 240.0
N1 CAP CAW HAP2 119.9 120.0
HAW1 CAW CAP HAW2 120.3 120.0
HAP1 CAP CAW HAP2 239.9 240.0
NAQ CAO CAW CAP 92.1 95.0
CAW CAO NAQ C17 185.3 179.8
NAQ CAO CAW HAW1 212.1 215.0
NAQ CAO CAW HAW2 332.3 334.9
NAQ CAO C17 CAM 1.7 359.6
NAQ CAO C17 H17 181.7 179.7
CAO NAQ CAX CAN 181.0 180.0
CAO NAQ CAX CAM 1.0 0.1
CAX NAQ CAO HAQ 180.0 179.9
C17 CAO CAW CAP 278.2 274.7
CAW CAO C17 NAQ 174.7 180.2
C17 CAO CAW HAW1 38.2 34.7
C17 CAO CAW HAW2 158.5 154.6
C17 CAO NAQ CAX 358.2 0.2
C17 CAO NAQ HAQ 178.2 180.3
CAX CAM C17 CAO 358.9 0.4
CAI CAM C17 CAO 178.7 180.1
CAM C17 CAO H17 180.0 179.8
CAX NAQ CAO C17 358.2 0.2
CAO NAQ CAX HAQ 180.0 180.1
CAN CAX NAQ CAM 180.0 179.9
NAQ CAX CAN CAJ 179.5 180.0
NAQ CAX CAN HAN 359.5 0.1
NAQ CAX CAM CAI 180.2 180.0
NAQ CAX CAM C17 0.1 359.7
NAQ CAX CAN CAM 180.0 180.1
CAN CAX NAQ HAQ 1.1 359.9
CAN CAX CAM CAI 0.2 0.0
CAN CAX CAM C17 180.1 179.8
CAX CAN CAJ CAF 0.8 0.1
CAJ CAN CAX HAN 180.0 180.0
CAX CAN CAJ HAJ 180.8 180.0
CAO C17 CAM CAX 358.9 0.4
NAQ CAX CAM CAN 180.0 179.9
CAM CAX NAQ HAQ 181.1 180.0
CAM CAX CAN CAJ 359.5 359.9
CAM CAX CAN HAN 179.5 180.0
CAF CAI CAM CAX 359.8 360.0
CAI CAM CAX C17 180.2 180.3
CAX CAM CAI HAI 179.8 180.0
CAX CAM C17 H17 178.9 180.3
CAJ CAN CAX CAM 359.5 359.9
CAX CAN CAJ HAN 180.0 180.0
CAN CAJ CAF CAI 359.3 360.0
CAF CAJ CAN HAJ 180.0 180.1
CAN CAJ CAF HAF 179.3 180.1
CAF CAJ CAN HAN 180.8 180.0
CAN CAJ CAF HAJ 180.0 179.9
CAJ CAF CAI CAM 0.4 0.0
CAI CAF CAJ HAF 180.0 179.9
CAJ CAF CAI HAI 180.4 180.0
CAX CAM CAI CAF 359.8 360.0
CAI CAF CAJ HAJ 179.3 180.0
CAJ CAF CAI HAF 180.0 180.1
CAF CAI CAM C17 180.0 180.3
CAM CAI CAF HAI 180.0 180.0
CAO C17 CAM CAI 178.7 180.1
CAX CAM CAI C17 179.8 179.6
CAM CAI CAF HAF 180.4 179.9
CAF CAI CAM HAI 180.0 180.0
CAI CAM C17 H17 358.8 359.9
CAO C17 CAM H17 180.0 180.2
CAX CAM C17 CAI 180.2 180.3
C17 CAM CAI HAI 360.0 0.4
N1 CAP CAW HAW1 217.5 60.0
N1 CAP CAW HAW2 97.2 300.0
CAW CAP N1 HAP1 120.0 120.0
CAW CAP N1 HAP2 240.1 240.0
CAT CAL N1 CAP 157.7 174.1
CAK CAG N1 CAP 196.8 185.9
CAG N1 CAP CAL 231.3 235.7
CAP N1 CAG HAG1 76.9 65.9
CAP N1 CAG HAG2 317.5 305.8
CAP N1 CAL HAL1 37.7 54.1
CAP N1 CAL HAL2 278.9 294.2
HAP1 CAP N1 HAP2 120.1 120.0
CAD CAV CAU CAE 0.7 0.0
CAD CAV CAU CAS 176.0 180.0
CAU CAV CAD HAV 180.0 180.2
CAV CAD CAC CAR 357.9 360.0
CAC CAD CAV HAD 180.0 180.0
CAV CAD CAC HAC 177.9 180.0
CAU CAV CAD CAC 1.4 0.0
CAD CAV CAU HAV 180.0 179.8
CAU CAV CAD HAD 181.5 180.0
CAR CAE CAU CAV 357.8 0.0
CAE CAU CAV CAS 184.7 180.0
CAV CAU CAE HAE 177.8 180.0
CAV CAU CAS CAT 179.3 240.0
CAV CAU CAS CAK 48.6 120.3
CAV CAU CAS HAS 295.1 0.2
CAC CAD CAV CAU 1.4 0.0
CAC CAD CAV HAV 181.4 179.8
CAV CAD CAC HAD 180.0 180.0
CAD CAC CAR CAE 0.6 0.1
CAR CAC CAD HAC 180.0 180.0
CAD CAC CAR HAR 180.6 180.0
CAR CAC CAD HAD 177.9 180.0
CAD CAC CAR HAC 180.0 180.0
CAC CAR CAE CAU 1.5 360.0
CAE CAR CAC HAR 180.0 180.1
CAC CAR CAE HAE 181.5 179.9
CAV CAU CAE CAR 357.8 0.0
CAE CAR CAC HAC 180.6 180.0
CAC CAR CAE HAR 180.0 179.9
CAR CAE CAU CAS 182.6 180.0
CAU CAE CAR HAE 180.0 180.0
CAV CAU CAE CAS 175.3 180.0
CAE CAU CAV HAV 180.7 180.2
CAU CAE CAR HAR 181.6 180.0
CAR CAE CAU HAE 180.0 180.0
CAE CAU CAS CAT 354.5 60.0
CAE CAU CAS CAK 223.8 300.3
CAE CAU CAS HAS 110.3 180.1
CAV CAU CAS CAE 184.8 180.0
CAS CAU CAV HAV 356.0 0.2
CAS CAU CAE HAE 2.5 0.1
CAT CAS CAU CAK 130.7 119.7
CAU CAS CAT CAL 180.2 182.4
CAT CAS CAU HAS 244.2 239.9
CAU CAS CAT HAT1 300.2 302.3
CAU CAS CAT HAT2 60.8 62.4
CAU CAS CAK CAG 175.1 177.6
CAK CAS CAU HAS 113.5 120.2
CAU CAS CAK HAK1 295.1 297.5
CAU CAS CAK HAK2 56.1 57.6
CAU CAS CAT CAK 228.7 240.0
CAU CAS CAT HAS 115.0 120.1
CAT CAS CAK CAG 45.1 57.7
CAK CAS CAT HAS 246.2 240.1
CAT CAS CAK HAK1 165.1 177.6
CAT CAS CAK HAK2 286.1 297.6
CAS CAT CAL N1 59.1 59.1
CAL CAT CAS HAT1 240.0 240.1
CAL CAT CAS HAT2 119.4 120.0
CAS CAT CAL HAL1 179.2 179.1
CAS CAT CAL HAL2 297.9 299.2
HAT1 CAT CAS HAT2 239.4 239.9
CAU CAS CAK CAT 130.0 120.0
CAU CAS CAK HAS 245.6 239.8
CAK CAS CAT CAL 311.5 302.4
CAT CAS CAK HAS 115.5 119.9
CAK CAS CAT HAT1 71.5 62.3
CAK CAS CAT HAT2 192.1 182.4
CAS CAK CAG N1 307.5 300.8
CAG CAK CAS HAK1 240.0 240.1
CAG CAK CAS HAK2 119.0 120.0
CAS CAK CAG HAG1 67.5 60.8
CAS CAK CAG HAG2 186.8 180.8
HAK1 CAK CAS HAK2 239.0 239.9
CAP N1 CAL CAT 157.7 174.1
CAL CAT CAS CAK 311.5 302.4
CAL CAT CAS HAS 65.3 62.3
CAS CAT CAL HAT1 120.0 119.9
CAS CAT CAL HAT2 240.6 240.0
CAG N1 CAL CAT 289.4 298.3
N1 CAL CAT HAL1 240.0 240.0
N1 CAL CAT HAL2 121.3 120.0
HAT1 CAT CAL HAT2 120.6 120.1
HAL1 CAL CAT HAL2 241.3 240.0
CAP N1 CAG CAK 196.8 185.9
CAG CAK CAS HAS 289.6 297.8
CAS CAK CAG HAK1 120.0 119.9
CAS CAK CAG HAK2 241.0 240.0
CAK CAG N1 CAL 67.3 61.7
N1 CAG CAK HAG1 240.0 240.1
N1 CAG CAK HAG2 120.7 120.0
HAK1 CAK CAG HAK2 121.0 120.2
HAG1 CAG CAK HAG2 240.6 240.0
CAP N1 CAG CAL 129.5 124.1
CAG N1 CAP HAP1 23.4 50.0
CAG N1 CAP HAP2 263.3 290.0
CAT CAL N1 CAG 289.4 298.3
N1 CAG CAK HAK1 187.5 181.0
N1 CAG CAK HAK2 66.5 60.8
CAK CAG N1 HAG1 120.0 120.0
CAK CAG N1 HAG2 239.3 240.0
CAG N1 CAL HAL1 169.4 178.2
CAG N1 CAL HAL2 50.7 58.3
HAG1 CAG N1 HAG2 119.3 120.1
CAP N1 CAL CAG 228.3 235.9
CAL N1 CAP HAP1 152.1 174.2
CAL N1 CAP HAP2 32.0 54.2
N1 CAL CAT HAT1 299.1 299.2
N1 CAL CAT HAT2 178.6 179.1
CAT CAL N1 HAL1 120.0 120.0
CAT CAL N1 HAL2 238.8 240.0
CAL N1 CAG HAG1 307.3 301.8
CAL N1 CAG HAG2 188.0 181.7
HAL1 CAL N1 HAL2 118.8 119.9
CAO CAW HAW1 CAP 239.4 240.0
HAW1 CAW CAO NAQ 212.1 215.0
HAW1 CAW CAO C17 38.2 34.7
CAO CAW HAW1 HAW2 119.7 119.9
HAW1 CAW CAP N1 217.5 60.0
CAP CAW HAW1 HAW2 240.3 239.9
HAW1 CAW CAP HAP1 337.5 180.0
HAW1 CAW CAP HAP2 97.6 300.0
CAO CAW HAW2 CAP 120.4 120.0
HAW2 CAW CAO NAQ 332.3 334.9
HAW2 CAW CAO C17 158.5 154.6
CAO CAW HAW2 HAW1 240.2 240.1
HAW2 CAW CAP N1 97.2 300.0
CAP CAW HAW2 HAW1 119.8 120.0
HAW2 CAW CAP HAP1 217.2 60.0
HAW2 CAW CAP HAP2 337.4 180.0
CAW CAP HAP1 N1 239.8 240.0
HAP1 CAP CAW HAW1 337.5 180.0
HAP1 CAP CAW HAW2 217.2 60.0
CAW CAP HAP1 HAP2 119.9 120.0
HAP1 CAP N1 CAG 23.4 50.0
HAP1 CAP N1 CAL 152.1 174.2
N1 CAP HAP1 HAP2 240.1 240.0
CAW CAP HAP2 N1 120.1 120.0
HAP2 CAP CAW HAW1 97.6 300.0
HAP2 CAP CAW HAW2 337.4 180.0
CAW CAP HAP2 HAP1 240.1 240.0
HAP2 CAP N1 CAG 263.3 290.0
HAP2 CAP N1 CAL 32.0 54.2
N1 CAP HAP2 HAP1 119.9 120.0
HAQ NAQ CAO C17 178.2 180.3
CAO NAQ HAQ CAX 180.0 179.9
HAQ NAQ CAX CAN 1.1 359.9
HAQ NAQ CAX CAM 181.1 180.0
CAO C17 H17 CAM 180.0 179.8
HAN CAN CAX CAM 179.5 180.0
CAX CAN HAN CAJ 180.0 180.0
HAN CAN CAJ CAF 180.8 180.0
HAN CAN CAJ HAJ 0.8 359.9
CAN CAJ HAJ CAF 180.0 180.1
HAJ CAJ CAN HAN 0.8 359.9
HAJ CAJ CAF CAI 179.3 180.0
HAJ CAJ CAF HAF 359.2 0.1
CAJ CAF HAF CAI 180.0 179.9
HAF CAF CAJ HAJ 359.2 0.1
HAF CAF CAI CAM 180.4 179.9
HAF CAF CAI HAI 0.4 359.9
CAF CAI HAI CAM 180.0 180.0
HAI CAI CAF HAF 0.4 359.9
HAI CAI CAM C17 360.0 0.4
CAD CAV HAV CAU 180.0 180.2
HAV CAV CAD CAC 181.4 179.8
HAV CAV CAD HAD 1.4 359.8
HAV CAV CAU CAE 180.7 180.2
HAV CAV CAU CAS 356.0 0.2
HAD CAD CAV CAU 181.5 180.0
CAV CAD HAD CAC 180.0 180.0
HAD CAD CAV HAV 1.4 359.8
HAD CAD CAC CAR 177.9 180.0
HAD CAD CAC HAC 357.9 360.0
CAD CAC HAC CAR 180.0 180.0
HAC CAC CAD HAD 357.9 360.0
HAC CAC CAR CAE 180.6 180.0
HAC CAC CAR HAR 0.6 360.0
CAC CAR HAR CAE 180.0 180.1
HAR CAR CAC HAC 0.6 360.0
HAR CAR CAE CAU 181.6 180.0
HAR CAR CAE HAE 1.6 360.0
CAR CAE HAE CAU 180.0 180.0
HAE CAE CAR HAR 1.6 360.0
HAE CAE CAU CAS 2.5 0.1
CAU CAS HAS CAT 240.7 239.9
CAU CAS HAS CAK 120.7 120.2
CAT CAS HAS CAK 240.0 240.3
HAS CAS CAT CAL 65.3 62.3
HAS CAS CAT HAT1 185.3 182.2
HAS CAS CAT HAT2 305.8 302.3
HAS CAS CAK CAG 289.6 297.8
HAS CAS CAK HAK1 49.6 57.7
HAS CAS CAK HAK2 170.6 177.7
HAT1 CAT CAS CAK 71.5 62.3
CAS CAT HAT1 CAL 238.9 240.2
HAT1 CAT CAS HAS 185.3 182.2
CAS CAT HAT1 HAT2 119.4 120.1
HAT1 CAT CAL N1 299.1 299.2
CAL CAT HAT1 HAT2 240.6 239.9
HAT1 CAT CAL HAL1 59.2 59.2
HAT1 CAT CAL HAL2 177.9 179.2
HAT2 CAT CAS CAK 192.1 182.4
CAS CAT HAT2 CAL 120.8 119.8
HAT2 CAT CAS HAS 305.8 302.3
CAS CAT HAT2 HAT1 240.4 239.9
HAT2 CAT CAL N1 178.6 179.1
CAL CAT HAT2 HAT1 119.6 120.1
HAT2 CAT CAL HAL1 298.6 299.1
HAT2 CAT CAL HAL2 57.3 59.2
CAS CAK HAK1 CAG 238.1 240.2
HAK1 CAK CAS HAS 49.6 57.7
CAS CAK HAK1 HAK2 119.0 120.0
HAK1 CAK CAG N1 187.5 181.0
CAG CAK HAK1 HAK2 241.0 239.8
HAK1 CAK CAG HAG1 307.5 300.9
HAK1 CAK CAG HAG2 66.8 60.9
CAS CAK HAK2 CAG 121.3 119.9
HAK2 CAK CAS HAS 170.6 177.7
CAS CAK HAK2 HAK1 240.6 240.0
HAK2 CAK CAG N1 66.5 60.8
CAG CAK HAK2 HAK1 119.3 120.1
HAK2 CAK CAG HAG1 186.5 180.7
HAK2 CAK CAG HAG2 305.8 300.8
CAT CAL HAL1 N1 242.6 240.0
HAL1 CAL CAT HAT1 59.2 59.2
HAL1 CAL CAT HAT2 298.6 299.1
CAT CAL HAL1 HAL2 121.3 120.1
N1 CAL HAL1 HAL2 238.7 240.1
CAT CAL HAL2 N1 118.3 120.0
HAL2 CAL CAT HAT1 177.9 179.2
HAL2 CAL CAT HAT2 57.3 59.2
CAT CAL HAL2 HAL1 239.2 239.9
N1 CAL HAL2 HAL1 120.9 119.9
CAK CAG HAG1 N1 241.3 240.0
HAG1 CAG CAK HAK1 307.5 300.9
HAG1 CAG CAK HAK2 186.5 180.7
CAK CAG HAG1 HAG2 120.7 120.0
HAG1 CAG N1 CAL 307.3 301.8
N1 CAG HAG1 HAG2 239.4 240.0
CAK CAG HAG2 N1 119.2 120.0
HAG2 CAG CAK HAK1 66.8 60.9
HAG2 CAG CAK HAK2 305.8 300.8
CAK CAG HAG2 HAG1 239.6 240.0
HAG2 CAG N1 CAL 188.0 181.7
N1 CAG HAG2 HAG1 120.4 120.0